Array 1 1371706-1369818 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP034367.1 Halomonas venusta strain MA-ZP17-13 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 1371705 28 100.0 32 ............................ AAAACGCGGTGCTGGAAGCGCTGACCGCTGGA 1371645 28 100.0 32 ............................ GCAGAGAGTGAGGGAAGCCGTAAATAGGCTAG 1371585 28 100.0 32 ............................ CTGGACAATCCCCAGCGCATACGCTTTGCGGA 1371525 28 100.0 32 ............................ GCTAAAGGCGACACGGTAACGGTAACGGATAA 1371465 28 100.0 32 ............................ ATCATGGCCACGCATCGAGGACAAAGGGGCTG 1371405 28 100.0 32 ............................ AGGCCAAGGTCGCCCGAGAAACTATACGCCCA 1371345 28 100.0 32 ............................ ATATCGGCAGCGGGCACCACCACTTAGTCCGT 1371285 28 100.0 32 ............................ TGGACAATTCAGACGAGGACGACAGCGACCAG 1371225 28 96.4 32 .......................G.... AAAGAGGAGTTCACCGCCCTACGGCGCAAAGT 1371165 28 100.0 32 ............................ ATACTGGAGAAGTCATCGAGGTTCGTAATAGG 1371105 28 100.0 32 ............................ TAACCGCGTTGCTTTATTTGAGCGCAGGCGGT 1371045 28 100.0 32 ............................ AGCCCTACACGCAACGCAAATGCTCGCAGTGC 1370985 28 100.0 32 ............................ ATTTGGAAATGCAGCGCACCCGTAACCGTATC 1370925 28 100.0 32 ............................ TATATGGAAATAACCAGGGCCGGTCATGTGCA 1370865 28 100.0 32 ............................ GTGAGCGGCACCACACAGGATAAGCCCGCCCG 1370805 28 100.0 32 ............................ AGAGGATGCGCGAAGCCTGGTCAGAGCGCCAT 1370745 28 100.0 32 ............................ TGTACAGAAATTCACGGTTGCGGTACCGATGC 1370685 28 100.0 32 ............................ AGCAACGGCAGCGCGGGCAGCTCGCGCTCTCC 1370625 28 100.0 32 ............................ TAATTTCATTAACTTAGTAACCACTTGGAAAG 1370565 28 100.0 32 ............................ ACTGCCTCGCGGCGGTGGGGGCTTTTTCGCGT 1370505 28 100.0 32 ............................ ACGGCGCGCGTGAGTTTGGCATAGAGCAAGAC 1370445 28 100.0 32 ............................ TGGGCAAAACACTGCAGCCATTCCGGCGTGTT 1370385 28 100.0 32 ............................ AACAGCTCACGGGTTTCGGGGTTTGGCATCAC 1370325 28 100.0 32 ............................ AGCCCACGCGCCTCAACCGTTCCACCGGCCAT 1370265 28 100.0 32 ............................ CGCGCACGCTGCCAGGCATTGGCCTCTTGCTC 1370205 28 100.0 32 ............................ TGGGAAACTGATTGACGTAGCCCGTTCGCTCT 1370145 28 100.0 32 ............................ GTCCCGCTGGGCAGGACGACCAGGATAGGGCA 1370085 28 100.0 32 ............................ ATAAAGGTTCGACACCGATCGCCAATCTCTTC 1370025 28 100.0 32 ............................ TTGCTTTCCAATAGTCGAAATACCCATTAACG 1369965 28 100.0 32 ............................ AGTGGCGCGTCGCAATAGGCATGTCAGGCGGG 1369905 28 100.0 32 ............................ TACAGAGATGCGCGATATGACGATGTCCGCCC 1369845 28 82.1 0 ................T.A...C.C..T | ========== ====== ====== ====== ============================ ================================ ================== 32 28 99.3 32 CTTCACCGCCGAGCAGGCGGCTTAGAAA # Left flank : CGCTAATCGACAACATTCGAGAGGCAAAAGCACTGAGGGAGCAGGCAGTCATTCATTACCCTCGTGCAGTACCGGAGGGATACTCTGGCGCCTGGAGCATCTATCAACGATTTCGCATTCCTGCACGCCGATCAGAGCGCATACCCGGCCGTTCAGTGCGACTCAAGCGCGTTCAGGAAGCCAATGCGAACGAGCTCCCTTTCTTTCAAATGAAAAGCGAGAGCAATGGAGGCCGCTTTCGGCTTTACTGGGAAAAACTCTCCTATACAGGCACAACACCTTCGAATGATGAATCAGTACCCGACTCTTGGGGGTTATCAACAACGACAAAACCAGTACCGCTACCAGACCTTAGTTAGTACGACTCTTGACCCTTTTTTAAAGACCTCTAACGCTTTCATAAGAAACAACAACTTAGAGCACCACCTAAAAAAAGGGTCTTTTGCTCTTTAAAACTTCAGATGATTGATAGTCTTTGATAATTTGGGTATGTATCTCTA # Right flank : AAAAAACAAAATTAAATCAGCGCTCTACTTCTAGTGCCACCGATTACGCAGCGTGTGGTAGGGCTACGGTGAGCCCGCGAATGCAGCGCGTAGCGCTGCTTAGATACTCGGCAGCAGCGACTGGTTATGCACTATTCGTAGTGGCTCCAAAGCCGGAGCACTTTAATTACCCCTTCGTCTTCAAGCACTTGGTAAACCAAACGATGTTGAATATTGATGCGCCGTGAATAAGCCCCCGCAAGATCACCGATGAGCTTCTCAAACGGAGGCGGTTTCCGATACGGATCTTCTGCGATTAGTGCCAGCAGCTCCTGCGCCTTTGGCTTCAAGCCACTGGTGGCTAATTTCTTCGCATCTTTCTGAGCGTGTTTGGTGTAAACCAGCTTCCATGTCACCAGTCCAACTCCTCATCGCACTCATCTACAGGGGTCTCCATTCCCTCACGAACAGACTCTCGCATCCCTGGCACAGAAAGCAGGAAAAGCGTCTCCTGAATGGCA # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACCGCCGAGCAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCGCACAGGCGGCTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.20,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //