Array 1 140524-134625 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAABLM010000001.1 Flavobacterium sp. NST-5 contig00001, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 140523 47 100.0 30 ............................................... ATATGATTTCGGCAGGAATTAGGAATTTTG 140446 47 100.0 30 ............................................... ATGCTTATAAATTTATGTTTAATCAAAAAG 140369 47 100.0 30 ............................................... CACCGGCAACTCCACTTATTACAAAGGATG 140292 47 100.0 30 ............................................... TTTGATTTTTTAGTTTAACAATAAGAAGCC 140215 47 100.0 30 ............................................... AAGATTATGCGTTGTTGAAATCGTGGGAAG 140138 47 100.0 30 ............................................... TAAGTGGTGTTGTACTCACCTCTAACGTCG 140061 47 100.0 30 ............................................... ACCCGCAAGTGAAGTTCGTTCAATATTAGA 139984 47 100.0 30 ............................................... AAAAGTTGCAATGCCATTTTGTTAAGTTCA 139907 47 100.0 30 ............................................... TTCACTAAGTTCTTTACATACATCATATAT 139830 47 100.0 30 ............................................... TCCAGAATGTTTTGCTTTGCTACCAGCAAG 139753 47 100.0 30 ............................................... AGGCAAACTATCGGTATAATCGAAAGGCAC 139676 47 100.0 30 ............................................... AGTTTAAATTACTTCAAATGACTAAAGGGA 139599 47 100.0 30 ............................................... TATCGGGCAACAAAATCAATATCACTATAT 139522 47 100.0 30 ............................................... AAATATCTTCAATTTAACAGTGAAGAATGT 139445 47 100.0 30 ............................................... CCAAACCAAGTCATAAACAAATTGAATTAA 139368 47 100.0 30 ............................................... AGTTACGAAATAGGCAAAATATACAATCAT 139291 47 100.0 30 ............................................... TTATTTAAAATAACGCTTATTATTCATTTT 139214 47 100.0 30 ............................................... TTAGCTTAATTTTAGAAAAAACCGGAACAA 139137 47 100.0 30 ............................................... TAAACCTCTTTGAGTGATTAATACTTTCAC 139060 47 100.0 30 ............................................... CAAGCAAAAACAGTATTATAATCAATCCCT 138983 47 100.0 30 ............................................... CCGATGCTAAGATTGAATAGCTTTTACAGT 138906 47 100.0 30 ............................................... AAGTTTTACCTCAGCCCAAGAAATTACCAA 138829 47 100.0 30 ............................................... AATTTATAAAATCGTTTTGGGTATTTTTTA 138752 47 100.0 30 ............................................... GCAGGGTCGTACGAGTAATTATTAGTTGAA 138675 47 100.0 30 ............................................... ATCAAATACTATTTGTCTTTCGTTTTTAGT 138598 47 100.0 30 ............................................... TAAGATTATAGAAGTCGCATTTTTATTTTC 138521 47 100.0 30 ............................................... GAATGGGGAAGATAACCTATATCCTTACGA 138444 47 100.0 30 ............................................... ATATAATCCAAACAACAGCAAAGTAATAAG 138367 47 100.0 30 ............................................... AAGTAGCAATTTTACCGAAGTAAGTGCCAA 138290 47 100.0 30 ............................................... TTTCTTAGAAATTTCCTTACATTTTGAAAC 138213 47 100.0 30 ............................................... GAACGTGTCATAATAACAGTATAAGGACTT 138136 47 100.0 30 ............................................... TAACGCTTCAAACGTACGATTCAGACCTAA 138059 47 100.0 30 ............................................... AATCCAGTTGCTAGTATTATTTTTTGTATA 137982 47 100.0 30 ............................................... GCGTATAAAAATCAGTTAATAAAGGAAATA 137905 47 100.0 30 ............................................... TACGACAGATAATAAGATTATAATTAATGG 137828 47 100.0 30 ............................................... GCTAATAATCTACCGCAAAGGGTTTTAGCA 137751 47 100.0 30 ............................................... GGCAGCAACGATGTTGTTAACTGGAAATGT 137674 47 100.0 30 ............................................... CCGGAACAATTGTCTCCAGAGCAAAAGCTT 137597 47 100.0 30 ............................................... GCTCAAGATTATCGTTTATTCTAAGATTTA 137520 47 100.0 30 ............................................... TCGATTATCATTTCTTCTAATTTTTTATGA 137443 47 100.0 30 ............................................... TTGTGAATGGTAAGCCTGTGCGTGAACTTG 137366 47 100.0 30 ............................................... ACTCGTTTGAGTGGGTTTTATTAAAAAGGG 137289 47 100.0 30 ............................................... GAGGAAAGCGCAGTATTATTATCAGCTTTT 137212 47 100.0 30 ............................................... GACAAGACGTGCCATAGACTTCTCTTGATT 137135 47 100.0 30 ............................................... AAAACACAATCCATAGTCTATTTCTTTTAA 137058 47 100.0 30 ............................................... TTTTTCGATATTCGTTTATAAATCTTTTAG 136981 47 100.0 30 ............................................... TTTGATTTTGGAACACCTTTGTAAGCTAGA 136904 47 100.0 30 ............................................... GCCATACCTCCCTCAATCTGGTCTTGTTGA 136827 47 100.0 30 ............................................... GCACCGTTCTTTTCGGCTATTGCTTTTCGT 136750 47 100.0 30 ............................................... TACTTCAAACCCTGATAATGAAGAAGATGA 136673 47 100.0 30 ............................................... GTTGCGCTTCTTCGGCAATAGCTGGATTTA 136596 47 100.0 30 ............................................... AGCGACATTAGCCCGCTGAAATTAAAATAT 136519 47 100.0 30 ............................................... TAACCAACAAGACGGGATTATCGTAAAATT 136442 47 100.0 30 ............................................... TAAATTATAGTTCATAAAAAACAGTTAAAC 136365 47 100.0 30 ............................................... TAGGCTCGTCTAAGTAAACTATTGTTGCTA 136288 47 100.0 30 ............................................... GTTTACTACACAGCTTCTATTGTGGAAACT 136211 47 100.0 30 ............................................... AAGGGTTCTGCTGGTATTTGGCGGTCGTAA 136134 47 100.0 30 ............................................... TTATTCTTGTTCCTGCAAAAAATACAGACA 136057 47 100.0 30 ............................................... TTACAACCCAAACAATAGCAATATAATAAG 135980 47 100.0 30 ............................................... TTACTTATCGCTTTTCTTGCAATCTCATCT 135903 47 100.0 30 ............................................... CGAAATGGCAATTGATTTGGCTGTAAGTGG 135826 47 100.0 30 ............................................... CCGATTATCAAGAGCCTATTTGGAAATTTA 135749 47 100.0 30 ............................................... AAGTCAGAAAGTGGAGAATTCGGAAATATG 135672 47 100.0 30 ............................................... AGGTCTATTACTTTCACGAGTTGTTGTCAA 135595 47 100.0 30 ............................................... TCTAAACTAAATTGTTTAGATTGTGCTTCA 135518 47 100.0 30 ............................................... TGACCACTTCCAATCCTGTCGCCACCTAAA 135441 47 100.0 30 ............................................... TCTATTTGTGCCGTTTGTAAAGCAATATTA 135364 47 100.0 30 ............................................... TTTGCCTATTCCGGGACTACATAATACTTT 135287 47 100.0 30 ............................................... TTGAAAGTTAGAATCATATTTAAAATTTTG 135210 47 100.0 30 ............................................... CATTGGATTAACTCGCTCAAAATCGCTTTT 135133 47 100.0 30 ............................................... TACCTTGTAGTTCGTTCATTTTTTCAGAAA 135056 47 100.0 30 ............................................... TTAACAGATTTAGCAATGTTAGCAATCGTT 134979 47 100.0 30 ............................................... ATATTTATTTCCCTCAATCACTTTAATTGG 134902 47 100.0 30 ............................................... ACAAAAAACCAAGCAATAGAAAAACTTCGA 134825 47 100.0 30 ............................................... AGGTTGCGGCTTCTTACGGTTGCCGCTAAC 134748 47 100.0 30 ............................................... AAAGGCGCTGCTTACAGTGGAGACGACAAT 134671 47 78.7 0 ...................................A.CCGATGGCG. | ========== ====== ====== ====== =============================================== ============================== ================== 77 47 99.7 30 GTTGCGATTAATCACGAAGATAAAAAAAATTGAAAGCAATTCACAAC # Left flank : GATGACAAAACAAGACCGTTGCTGGTTGCCGTAAAAACAACGGCTTCGTCGCTTTACAAATGTTACACAGGAGAAAAGCGACTGATTTCCTATCCAGAATTGATATGAATGCCGAAAGGTTTAATGCCTACCGAATTATGTGGGTTTTAGTTTTATACGATTTACCGACGGATACCAAAGCAGCCATGAAAGATGCAAACCGTTTTAGAAAAAGTTTGTTAGACGACGGATTTACACTCTTTCAATTTTCGATGTACGTCCGGCATTGTCCAAGCCGAGAAAATGCTGAGGTACATATCAAGCGTGTCAAAAACTTGCTTCCAAAAGCTGGCAAAGTCGCCATTATGAGTATCACCGACAAACAATTTGGCGACATTGAAATCTTTTTTGCTAGAAATAAAGAAAAACCAAAAACCGGAAGCCAACAACTCGAATTATTCTAAATTTTGATTTCTATTATAAAAAATAACCTTCTGAATTTCAGAAGGTTATTTTTTGAG # Right flank : GGACTGGAAAAACAACAACAACATTGATAACAGTAGGCTCTGTTTTAATAAATAAGAAATTGATTAACTAGTTTGAACTTAACACACCCCTAACCCCTCTCGAGAGGGGAATTTTGCGGAAGTATTTACCAAATGCAAAACATTCAACGACTCCAAATAAAAATATTATCAGGAGTTAATTTTTCTTAAATTTACCTTTTGGAGAAATCGGAGCATCGCGGAGATTCAACGAACACCGCTGAAAAATTAATACGTGTGAGCTAAACGATGGCGGAACAACATAGTTTTACCGAAGACTATGCCAACCCGTTTAAGTTTAATGGCAAGGAACTGGATGAAGAAACAGGGATGTACTACTACGGTGCTCGTTATTATGACCCGAAGATTAGTATATGGATGAGTGTGGATCCGTTGGCGGAGCAGTTTCCTGAGTGGAATCCTTATAATTATTGTATGCAGAATCCTGTGAAATATGTGGATCCTAATGGCAAGGCTCCCTT # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCGATTAATCACGAAGATAAAAAAAATTGAAAGCAATTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.21%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.20,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.18 Confidence: HIGH] # Array family : NA //