Array 1 115986-112237 **** Predicted by CRISPRDetect 2.4 *** >NZ_BMXO01000006.1 Halomonas johnsoniae strain KCTC 22157 sequence06, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 115985 28 100.0 32 ............................ AGGTGCCAACGGCCAGGCCGTCTTCTTCCGAG 115925 28 100.0 32 ............................ TCGGTGATTGTGGTGCCCGCGCACCTATCCAC 115865 28 100.0 32 ............................ AGTACCCGTTCCGTGATGGGCACCGGGTAACG 115805 28 100.0 32 ............................ AAGTATCAGCATTGAGAATCAACGCCAAAAAG 115745 28 100.0 32 ............................ AAGGGCAGCGTTGACCAGGATGCGGCGCAGAT 115685 28 100.0 32 ............................ GTCTTGATCGGCGTAGGTCGGTGATTCGATGC 115625 28 100.0 32 ............................ ACCCGTCAAAGGCACCGGCTTCTTCATGACAC 115565 28 100.0 32 ............................ GGCGAGCAGGCGCGCGGTTTTCGAACGGCCTT 115505 28 100.0 32 ............................ AGCGTGTACCAGCGCGAAATGTCCCGCGCATC 115445 28 100.0 32 ............................ GAGTAGATACTCCGCAAACTATCGGTGGTTAT 115385 28 100.0 32 ............................ TGAACCCGCCAAGCCTCAAGCTGAAAAGCAGT 115325 28 100.0 32 ............................ TCCTTAAGCTCTCGTTTCTGAATGTCGGTATC 115265 28 100.0 32 ............................ TGAATGAACCGATGACCACCATCACCACCAAA 115205 28 100.0 32 ............................ CAACGGCGAGGCGCTACCGCCCCGCAAGTTTT 115145 28 100.0 32 ............................ TCGATGCCGTTGGCCAGGCCTTCGGTGATGAA 115085 28 100.0 32 ............................ TAGAATCGGCGCGCCCACGTCAAAGCGCTCAT 115025 28 100.0 32 ............................ GCCTCCACCTGCGAAGTTATCGACGACCAGCT 114965 28 100.0 32 ............................ ACACGGTTTGCATGACCGACTTGTTCTTCCTG 114905 28 100.0 32 ............................ TGCTGGCAGCGCGGGCTGGCGCCGGATGCCAA 114845 28 100.0 32 ............................ ATGCTCATTCAGCAGTGTCGATGCCGTCGAAC 114785 28 100.0 32 ............................ GTCTGTTCTGCAGGCGTAGACGTAGTCTCCGC 114725 28 100.0 32 ............................ ATGCTGGTACCTGAAGGCTACAAGCTGGAGTC 114665 28 100.0 32 ............................ AGCGTGCCGATGGTGATGCGCAGCGCTTCGGC 114605 28 100.0 32 ............................ ACCCAGCAAATCAGCCAGCTCACCAAGCCAGA 114545 28 100.0 32 ............................ AACGCTTGTCGTCGAAGTCGTGGCGGCGCAGG 114485 28 100.0 32 ............................ AGTTGGCATGGCCTCTTGCTGAGTCGCCATGC 114425 28 100.0 32 ............................ TTGTATTCGAAATGCCATTCCCCACCGGCCTC 114365 28 100.0 32 ............................ GCAAGGATGTAGCAGAGGCGGTGATATGCGGC 114305 28 100.0 32 ............................ GGTTCCGGCTTCCGCTATCGACTCCAGAACAA 114245 28 100.0 32 ............................ ATCAGCGTGAAGAGCGCCCGCAATATAAAGGG 114185 28 100.0 32 ............................ GCTCAGTGCCGCTACTCGCGGCATGTCCGGTC 114125 28 100.0 32 ............................ AACGCCCCTCACAGTGCCCGACAGCCCTGCGT 114065 28 100.0 32 ............................ CTAAGGAGGGCAATCAAGTGACCGAAGAAGAA 114005 28 100.0 32 ............................ TGGGTCAGTCACCCAGCCGCCCTCTGGCCAGG 113945 28 100.0 32 ............................ TTGATGATGGGGAGGTTCCCTTGGTTCATCTG 113885 28 100.0 32 ............................ TTTGAGCGAGCAACTGACCTATGGCTGCCAGT 113825 28 96.4 32 ..T......................... GAACTGCACGACGGCAACTCCAAGCGCAACAT 113765 28 96.4 32 ..T......................... TGTTAGCTTCTGGTTGTAAATTACCTCATCAG 113705 28 96.4 32 ..T......................... CAACGCACTGGTCGGCAGTAGCCAGCGCGACA 113645 28 96.4 33 ..T......................... AGTTAGTCAAATGCTTTTCCGTCACGTGTCTCT 113584 28 96.4 32 ..T......................... ACTCCTGTACAGCCTGCTCTACCTCGGCCTCC 113524 28 96.4 32 ..T......................... AACAGATGATCCGGTGGAGCAAGCCCGCCGAA 113464 28 96.4 32 ..T......................... TCAAGCCCCAAGGTGCACATCAACCGAAACGC 113404 28 96.4 32 ..T......................... ACATATCGGAATGCACGGCCACGGAGCCAGAG 113344 28 96.4 32 ..T......................... ATTCTGGCCGAGGGGCAGCGGCCGCCCATCGC 113284 28 96.4 32 ..T......................... GATTGCTCCAGACGCTCCCGGTCATCATCCAT 113224 28 96.4 32 ..T......................... TAACGCATCAAGTGGTCGAGTCGATAAAGAAC 113164 28 96.4 32 ..T......................... AAGCCCGGCGCCAAGGCCGGGTCGTGGTGAAG 113104 28 96.4 32 ..T......................... GTTATCGAGTGGGACACCTCTGTCGTAAACCG 113044 28 96.4 32 ..T......................... ACCGGCCTCAGCGGGTTCGACCTGGAAGCCGT 112984 28 96.4 32 ..T......................... GACTTCCAGCCACATGATCGCATCGTCATTGA 112924 28 96.4 32 ..T......................... ATAAGGCAGGCCCCCAGCGGATGCCAAAGAGG 112864 28 96.4 32 ..T......................... AGCGCCTGCCGGATAAGGCGTCCATGGCCCGC 112804 28 96.4 32 ..T......................... ACGTTGAAAAATGCCATTTCTAACGTCCTCCC 112744 28 96.4 32 ..T......................... GCGCCCATCCCGGAGCCAAACCTCATTCCACA 112684 28 96.4 32 ..T......................... GCGCCCATCCCGGAGCCAAACCTCATTCCACA 112624 28 96.4 32 ..T......................... TCGGTATGGCTCAACACGTGGCCAGCAAATCC 112564 28 96.4 32 ..T......................... ATCTTGGAAGGTGAACTTCCCTTGGACGGCAG 112504 28 96.4 32 ..T......................... TGAATCAGCTTGTCATCGAGGCGCGGCACAAT 112444 28 96.4 32 ..T......................... ACCGCCCTACAATCCCTGCAAGACCGCCTTTA 112384 28 96.4 32 ..T......................... AGGGCGTGCGTTAGCTGCCAGAGCTACGAACA 112324 28 96.4 32 ..T......................... ATGAACCGGGTCTCTTCTGTTGAGATTCATGC 112264 28 75.0 0 A.T....................TTGTT | ========== ====== ====== ====== ============================ ================================= ================== 63 28 98.1 32 GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : AGCGACTAAAGCAACTGATGAGTATGGATTGGCTGACAGGCATGCGGGATCACACGCAGGTAAGCGAAGTGCAGGAAGTTCCTGCGCGTGCTCAGCATATCAACGTAGCGCGGAAGCAGTTCAACACGGGCAGCGAGAGCCGTGCCAAGCGCTATGCCAAACGGCACAGCATTAGCGAAGAGGAGGCAAGGAGCATTTACGCCAAGGTGGCGGCTCGACGAATTGAGCTACCGTTTGTGCAGATCAATAGTCGATCTACTCAACAGCGTTTCAGCCTGTTTATTGAACATGGCAAACCTGCAGCGTCTTCATCGGAAGGTTCATTCAGCCATTACGGCTTGAGCCCCAGCGCCACCGTGCCCTGGTTTTGACCCTTTTTTCTAACATGAAAATAGGCAGCTAATAATCAATGACTTAGCGGTATTGCTCCTGAAAGGGTAATGCCGCTTTTTTTGGTGAAAGCTCTTTAACAATCAGCACATTAATTTTGATATGCTCTA # Right flank : CCGGTTGGTGCGCTAGTGTTGAGGCGGTGAGTTCATGCAGGTGTCTGCCGCATGGGTGGCCGGCCCATGCTTAACCCCCGCCCCAACATGTCGCCCGAGCGGGGGCCGTGGTTACTCTTTTTCGTCCTCTTCTTCCTCTTCCCAGTGTTCCATGGCGCGTTTGTCGTCGGGTAGGCGCACGATGTCGCCGATGACGATTTTCTGGTGCGATTTGAAGCGGTGGCCGTGTTCGTCGAGGATGGCGGCGACGCTGCCGATGCTGACGGCGTCGTCGTCACGGTAGGCTTCTACTTTGACGCGTACGATGCGGCCCTGGTAGCGGGCGGAAAGGATAGCGCCGGGGTAGGGGGAGGTGTGGTCAGGGTCGTTCTTGAAGTACTCCACCACGCTCGCGCTGCCGGGGTCGTCCCATTCAATATGTTTATGCATAGGAAGGCTTCCTTTCGTGTGTCCAGAAAAAGGGTTCCTTTTCAGTGTAGTTTGCGTTGGTAGAAGTCAAC # Questionable array : NO Score: 6.05 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.89, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : GTTCGCTGCCGCCCAGGCAGCTCAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //