Array 1 24494-21844 **** Predicted by CRISPRDetect 2.4 *** >NZ_FLDR01000006.1 Klebsiella pneumoniae strain k616, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 24493 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 24432 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 24371 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 24310 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 24248 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 24187 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 24126 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 24065 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 24004 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 23943 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 23882 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 23821 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 23760 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 23699 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 23638 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 23577 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 23516 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 23455 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 23394 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 23333 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 23272 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 23211 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 23150 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 23089 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 23028 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 22967 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 22906 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 22845 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 22784 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 22723 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 22662 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 22601 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 22540 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 22479 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 22418 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 22357 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 22296 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 22235 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 22174 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 22113 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 22052 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 21991 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 21930 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 21872 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //