Array 1 38093-37303 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSAT01000023.1 Holdemanella biformis strain AF10-31 AF10-31.Scaf23, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ======================================== ================== 38092 31 96.8 36 ..........................C.... CAACTTTCATTTGTTCAATCGCACCTTTTACCTTAT 38025 31 96.8 40 ..........................C.... CGAAAAGAGCTCACAATTCATCTAATCCTTATGACTTTTT 37954 31 100.0 38 ............................... CTTTTTGTTTGTCTTCTAACTCGTCCCTTTTTTCTTCC 37885 31 100.0 36 ............................... TTTTTCAAGTGTTCCGATTAGCTGACATAGTATCTT 37818 31 100.0 38 ............................... TGATTTCCATTTGTATTGTTATCTTTGCCCAACATTTG 37749 31 100.0 40 ............................... TTTTGCTTGGCTTTTTCAGTCATTCCCGCACACTTGACAT 37678 31 100.0 35 ............................... TTTTAACAGTTCTAATTAACATTTCTGCTCCATTG 37612 31 100.0 40 ............................... TCAAATGCCTTGTGCATCCATTCCCCTGTTTTTCGATTTC 37541 31 100.0 40 ............................... CGGCAATACCCAGGTTGCAAGATTTGAGTTATTTGTTTAT 37470 31 100.0 39 ............................... TAATTAATAGGCCCATAATCTGATTCACGCTCGTAAATC 37400 31 100.0 36 ............................... TCATTAAGCGCACTTTTAGTCTCAGGAAAATACTCA 37333 31 83.9 0 ..........................TGAAT | ========== ====== ====== ====== =============================== ======================================== ================== 12 31 98.1 38 GTTGAATATTGTTCTTATAAAGGATTAACGC # Left flank : GTACACCGGTTATCTGAATACATTAAAGATAAGTCTAATACACTTGATTTTTTTGTGATGAAGTGGTGAGATTATGTACGTTATATGTGTGTATGATGTTAACGAAAAGACATGTGCTAAAGTAATGAAAATATTAAGAAGATACTTGTTTCATATACAAAAATCTGTTTTTGAAGGAACTTTAACACCCAAACAATTTAGTACTTTAAAGGAAGAACTGCATAAAGTTACAAGTGATGAGGATTCAATATTGTTTTATTTTTCATATAATGAAAAGCAGATATATAAAGAAGGATTGGATAAAGTGAACGAATCTCTAAATATTTTAATTGATTGATCATTCGACCATCAGTATAAAATTCAACCAAAAAAGCCTATATTTCCATTAAAAAGTAAAGGTGATCGAAAAAATTTGACATATTTTCCTAATGATTACTGAATTTTTAAGTGTTTATAGCCATTTTTGTAGTAAAATACTACGTATATGGCAAAAATTTGCT # Right flank : TACGTTTGTTTAAACAAAAAAGAAGTATTGCTACTTCTTAGGTGTTATATTAACTACCACATACTCACATATACCCTCTGTTCTTATAGGAAAACCTCAATCAACAAGGCCTGAGCTAATGATTTTTTGCGTAGTGCATGAATGTTTCTTTTCCGTAATTACCGGCAAAGTCAGGTTGTAAATGGTAAGAATAAGAGAGTGGAAACATTTGACCGTTATGAGTATGGCCGCTGAGTTGAGGTCGACATTATTTTTAATGTTTTCTCTTGTTCCTTGTGGTTGATGGTCGAGGATGATGTTGTAGGTTTTGTTTGTTAGATTGTAGTCTTTTGTTTTCTTTCGTTTTTTTTTTTTTGTAATCTTTTCTGCCGATAAGGATAATGTTATTTAAATGTACTTCTTGATCATTTAGAATGGTGATATTGTTTTTTGTAATTTCTTGATTGAGTTTGTTTCTTGTGAATTTTGTTTTGCCTTCGTGGTTGCCGTATACAAAATAG # Questionable array : NO Score: 3.16 # Score Detail : 1:0, 2:0, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAATATTGTTCTTATAAAGGATTAACGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:70.97%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-1.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.78 Confidence: HIGH] # Array family : NA //