Array 1 5056731-5054081 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP021939.1 Klebsiella pneumoniae strain AR_0145 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 5056730 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 5056669 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 5056608 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 5056547 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 5056485 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 5056424 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 5056363 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 5056302 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 5056241 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 5056180 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 5056119 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 5056058 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 5055997 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 5055936 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 5055875 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 5055814 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 5055753 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 5055692 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 5055631 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 5055570 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 5055509 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 5055448 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 5055387 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 5055326 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 5055265 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 5055204 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 5055143 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 5055082 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 5055021 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 5054960 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 5054899 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 5054838 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 5054777 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 5054716 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 5054655 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 5054594 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 5054533 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 5054472 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 5054411 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 5054350 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 5054289 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 5054228 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 5054167 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 5054109 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //