Array 1 245362-248755 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP065631.1 Fannyhessea vaginae strain FDAARGOS_934 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 245362 28 100.0 34 ............................ TCAGGATTATGTGATATTTCCTGCGCTAATTCTA 245424 28 100.0 33 ............................ CTAAAAAGCTTGGTTACGATGACGCAGAAGAGA 245485 28 100.0 34 ............................ TTGAAAAACAGTTAAAAGAAGATGATAGTGATGA 245547 28 100.0 33 ............................ CGAGATAATGCAATTTTGGGAACACTTTTTAGA 245608 28 100.0 33 ............................ CTTGCCTTCCCCGTACAAAGAGTCCATCTCATT 245669 28 100.0 33 ............................ TAATGAAAAATCTCTTTATAGAGTATGCAAAGA 245730 28 100.0 33 ............................ TAATATATGAGCATACACTCCCGATAAGTGGTA 245791 28 100.0 33 ............................ CGCACCAGCCTCTTTCGCGGCTGCCGTTGTAAC 245852 28 100.0 33 ............................ CAAAAGAGCCTGCAACAATTGCAAGCCCTGACG 245913 28 100.0 33 ............................ TACAGCTCCTCAAGACAATTTGCAGCATAATGC 245974 28 100.0 33 ............................ TTGAAAAATATCAGTTCGCTCTTAAAAAAATCC 246035 28 100.0 33 ............................ CAAGGTTATCGCAAACTACGATAGAGGCTGGGA 246096 28 100.0 33 ............................ CACGAACGGACACTATTGTGCGCGACAAGATAC 246157 28 100.0 33 ............................ TAAGTGGTATTCCCCACTGTATAAACGCGCTTA 246218 28 100.0 33 ............................ CCCATTTAGCGTCAAACCGAGCGCCATGTTTAA 246279 28 100.0 33 ............................ TTGCACCCAACACAGCTACAGCTACAGTGCCAA 246340 28 100.0 33 ............................ CTAAAAAGCTTGGTTACGATGACGCAGAAGAGA 246401 28 100.0 34 ............................ TTGAAAAACAGTTAAAAGAAGATGATAGTGATGA 246463 28 100.0 33 ............................ CGAGATAATGCAATTTTGGGAACACTTTTTAGA 246524 28 100.0 33 ............................ CTTGCCTTCCCCGTACAAAGAGTCCATCTCATT 246585 28 100.0 33 ............................ TAATGAAAAATCTCTTTATAGAGTATGCAAAGA 246646 28 100.0 33 ............................ TAATATATGAGCATACACTCCCGATAAGTGGTA 246707 28 100.0 33 ............................ CGCACCAGCCTCTTTCGCGGCTGCCGTTGTAAC 246768 28 100.0 33 ............................ CAAAAGAGCCTGCAACAATTGCAAGCCCTGACG 246829 28 100.0 33 ............................ TACAGCTCCTCAAGACAATTTGCAGCATAATGC 246890 28 100.0 33 ............................ TTGAAAAATATCAGTTCGCTCTTAAAAAAATCC 246951 28 100.0 33 ............................ CAAGGTTATCGCAAACTACGATAGAGGCTGGGA 247012 28 100.0 33 ............................ CACGAACGGACACTATTGTGCGCGACAAGATAC 247073 28 100.0 33 ............................ TAAGTGGTATTCCCCACTGTATAAACGCGCTTA 247134 28 100.0 33 ............................ CCCATTTAGCGTCAAACCGAGCGCCATGTTTAA 247195 28 100.0 33 ............................ TTGCACCCAACACAGCTACAGCTACAGTGCCAA 247256 28 100.0 33 ............................ CTAAAAAGCTTGGTTACGATGACGCAGAAGAGA 247317 28 100.0 34 ............................ TTGAAAAACAGTTAAAAGAAGATGATAGTGATGA 247379 28 100.0 33 ............................ CGAGATAATGCAATTTTGGGAACACTTTTTAGA 247440 28 100.0 33 ............................ CTTGCCTTCCCCGTACAAAGAGTCCATCTCATT 247501 28 100.0 33 ............................ TAATGAAAAATCTCTTTATAGAGTATGCAAAGA 247562 28 100.0 34 ............................ TTGGGCGCGTGGTGAGATAGGCTATTCTCGTTGG 247624 28 100.0 34 ............................ CACCAAAATTTGATAACCTCGGAGCCAATGTAAA 247686 28 100.0 33 ............................ TAATATACACCTTGATAATCCTGTACATGCTCT 247747 28 100.0 33 ............................ CACAAAAAAAGGAGACATCTGCCGCGCTTTCGA 247808 28 100.0 33 ............................ CGCCTTTAGGTAGGCTTTCAGTCAAAGTCACAG 247869 28 100.0 33 ............................ TAAGCTTGCAAAAAATACCCTCAGACAAAAGAG 247930 28 100.0 33 ............................ TAAGCTTGCAAAAAATACCCTCAGACAAAAGAG 247991 28 100.0 33 ............................ CGGAGCGTCCCATTTGCCTTGTAGCTCATGTGC 248052 28 100.0 34 ............................ TTATATACCGCAACGTTTCGATTGTACACTAAAG 248114 28 96.4 33 ............C............... CGTATTATATAAGATATACGCAACAATTAATAA 248175 28 96.4 34 ............C............... CAAGCAAAATACTACCTTGACACCGTAAACGATG 248237 28 96.4 33 ............C............... TATTTCTGTCTACGCTGTTGTTTTCGTTCCACT 248298 28 100.0 33 ............................ CGAAAGCATGACGGTCGCAACGTTCGCACGTAT 248359 28 96.4 33 .....A...................... CGGCGTTGGCACGCAATTGTACAAGGAGATATT 248420 28 96.4 34 ..A......................... CGCTGGTATAGATGTAACAAAGGTTTCAAAGCTG 248482 28 96.4 34 ..A......................... TAAGTTCATCTGCGTCTTGTGCGCTAATAGGTGA 248544 28 96.4 34 ..A......................... TCGTGGAAAGCAGCGTGTAGGACGTGGGATATTC 248606 28 96.4 33 ..A......................... TTGGGCACGTGGCGAGATTGGATATTCACGTTG 248667 28 96.4 33 ..A......................... TGGTCATTCTGTCATTGAATTTGAGGTAAAAAG 248728 28 82.1 0 ..A...................G.G.GA | ========== ====== ====== ====== ============================ ================================== ================== 56 28 99.1 33 GTTTTTCCCGCATACGCGGGGGTGATCC # Left flank : AACAGACGACAAAATCATAGAAATAGGCGCAATTAGAATTTGCGACAAGCAGGTAGATGACTATCAGTGTTTAATTAAACGGGATTCATTGAATCTTTCCCCAGCTATAACCCAACTAACTGGGCTTACCGATATAGAGCTCGCCAATCGGGGAGTAAATCCTAACTTGGCTCTTAATGGGTTGAAACAGTTTATAGGACATTTGCCTGTTCTAGGTTATAACATTGCGTTTGATATGCGATTTATAAATAATGAGCTACGCTCTATGAACGAAGAGCTTCTTGATAACAGAGAAATTGATGTAATGAGATTTATTAAGAAAGAAAAGATGTTCTTAGAGAGTTATGCGCTTGATAATGTTCTTAAAGTGTATGGAATATCAGCTACTGTTCCGCACCGGGCGCTTGGAGATGCTAAACTGATAGCAAAGCTTGCATTAAAAGTGAATAAAATTCTTGATGTTCTCTAGTTAAAGCAGCTTTAAACAGGGATTTTTAAGA # Right flank : ACCCCATCAACCTTGAGGTACATGGCGGTGTAAACGTGATTTTTACGATTGGTGGATTCGTCAAGTGTAAAGTTGAACAAGCGCATCTCTACTGGTTTGTTATGACACTTGCAACGTATGTTGTTAGTGTGTCACCTTAAAGAAAGAGCTTGAGGCGGACGCACGTGCGCTCATACCACGCCTAAACGCTAAAGGAGAAATATTACTGAAGACGACGTAACGAACGTGTAGAAGCGTTTACAAAGAGCTGTATTACGCATTCGATTAACTAATTGGTTGGATAACGGTAACTACACAGGGAGTAACCACTAAAATAATCTTGTTGAAAAATGTTGCAAGGATAATTCGAACGGTAAAAAATTGATTGTGAACGTGAAACCGAAATATTACGTCATACCGTTTTAAAACGGTGGAATTCTTATTTATATGTTATATTGTATAAAACACTTTACGCTGTAAAGTAAATGCTATAAATAGAATGTTAAAAGAGGTAATTATGA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTCCCGCATACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCCTTCCCGCACACGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-9.90,-9.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.18,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //