Array 1 204668-207375 **** Predicted by CRISPRDetect 2.4 *** >NZ_ULFJ01000005.1 Klebsiella pneumoniae strain EuSCAPE_LU001, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 204668 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 204727 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 204788 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 204849 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 204910 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 204971 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 205032 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 205093 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 205154 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 205215 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 205276 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 205337 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 205398 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 205459 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 205520 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 205581 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 205642 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 205703 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 205764 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 205825 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 205886 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 205947 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 206008 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 206069 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 206130 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 206191 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 206252 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 206313 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 206374 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 206435 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 206496 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 206557 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 206618 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 206679 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 206740 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 206801 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 206862 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 206923 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 206984 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 207045 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 207106 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 207167 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 207228 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 207289 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 207347 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 45 29 99.0 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-10] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //