Array 1 2552373-2548439 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP028918.1 Gemmobacter aquarius strain HYN0069 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 2552372 29 100.0 32 ............................. CCTATAACGGCGATCTGATCCGGCCGCTGAAA 2552311 29 100.0 32 ............................. CTGTCGTGCTGGGATGCGTCGGTCGGGGATGT 2552250 29 100.0 32 ............................. ATTGGGTGCTGGTCTGATGATCGAGGCGCGCC 2552189 29 100.0 32 ............................. AGATTACCGCCAACTGCCTGATCGAGATCACG 2552128 29 100.0 32 ............................. GGCGGCGGCGTTGGCCTTCAGCCATTCGCCGA 2552067 29 100.0 32 ............................. CAGGGCAGGTTCATTGCCACACACCCCAGCGG 2552006 29 100.0 32 ............................. AGGCACCGCTTCGACCAGACCAAGGCCGCGAT 2551945 29 100.0 32 ............................. GTTGATTTCGTCGCCGACAACAACTCGCCCGA 2551884 29 100.0 32 ............................. CATCATCGTTGAACTTCTGGACCGGGTAAGCG 2551823 29 100.0 32 ............................. CTGGCGGTCGATGCGCTATGGTTGACGATCGT 2551762 29 100.0 32 ............................. TCGCAGGATCTGTCGCGCCTGGTGGTGCTGAG 2551701 29 100.0 32 ............................. CTGTCGTGCTGGGATGCGTCGGTCGGGGATGT 2551640 29 100.0 32 ............................. GCAGCCTGCGCTGCCGGCGTTGATCTATCCTG 2551579 29 100.0 32 ............................. GCGCTGGTCGCGGTGACCCTGTCGGAATCGCC 2551518 29 100.0 32 ............................. ACGTCAGCAACGCCTCGATGTTCTCTTTCGGC 2551457 29 100.0 32 ............................. GCCTTGTCGCCGAACATTTCCGGCCAGAGCCA 2551396 29 100.0 32 ............................. CAATGCGGCTCGCGTCTCCCGTGCGCTGGATG 2551335 29 100.0 32 ............................. GACTTGCGCTGGGGATCGATGACGGGTTGCCG 2551274 29 100.0 32 ............................. GAGGCCGATATCATCGTGCTGGCGCGCACCGC 2551213 29 100.0 32 ............................. CGACACGCAAGCGACCGTGGCGCTGATGCCTG 2551152 29 100.0 32 ............................. AATTCGATCTCGACATCGTGCTCGTAGTGATA 2551091 29 100.0 32 ............................. GACCGCGCAGCCACGCACGGCGAGGCTGAGGA 2551030 29 100.0 32 ............................. GTGTCGATCTGGGTCTGACGATCATCGCGCTG 2550969 29 100.0 32 ............................. CCTATCGTCCTGATGTGAACGCGGGCGAGGCG 2550908 29 100.0 32 ............................. CCTGCTGAGCGCGATGGCCGGACGTGCGGCCT 2550847 29 100.0 32 ............................. TTGACCTCGGCAATCGAGGTAGGGCTTCGGAC 2550786 29 100.0 32 ............................. GGGCAAGGAATGACATCTCAGACCCTCCACGC 2550725 29 100.0 32 ............................. GCCTTGGCCTTGGCCATGGCTTCGGCAACGGC 2550664 29 100.0 32 ............................. TCCACTGGGGCGCAGAACGCCCAGTGTCCCAT 2550603 29 100.0 32 ............................. GACCCGTCGATCGACCAGGTGATTTCCGGCAC 2550542 29 100.0 32 ............................. CCAAGGCGAACGCAACCGAAGCCGAAGCCGCC 2550481 29 100.0 32 ............................. GCCCGCATGGTCGTCAACTGGTCGGCATCGCC 2550420 29 100.0 32 ............................. CCTGATCTGCTCCGTAAACGCTTCAATCCCAA 2550359 29 100.0 32 ............................. GACGCCGTGCTGTTCATCGCCAGCGCCCAGAT 2550298 29 100.0 33 ............................. GAAATTCGTCTTGATTGGGGCTTGTGGCCGCAC 2550236 29 100.0 32 ............................. ATTCAGGCTCGGCAATCTCAACTCTCTCAATT 2550175 29 100.0 32 ............................. CCGGGGGCTTGCCGGCGCATCGGCAGCCACTT 2550114 29 100.0 32 ............................. ATCGCCACCGCGGTAGACGCCATGGCCGGACG 2550053 29 100.0 32 ............................. GTGACGGCCTTTAGCTCGAGTGTGAACGTGGC 2549992 29 100.0 32 ............................. GTCTTGATCTCAAGCGCATGGTGCCCGGTCTC 2549931 29 100.0 32 ............................. GAAACGGCGGCGGACAAAGCCGTTCGGGATAA 2549870 29 100.0 32 ............................. CCATGGGCGGGGGCGGCGATGCCGTTCCCGCC 2549809 29 100.0 32 ............................. GATATGCGGCGCTTTGGTCCAGACCAAAACAG 2549748 29 100.0 32 ............................. TCAAAGGCGGAATGTGTGGCGGAACTGAAAAC 2549687 29 100.0 32 ............................. CTTTACCGGGGGTCTGATCGGTGGTTGCACCT 2549626 29 100.0 32 ............................. GGCACGGTTTCCAAAATGGCGCAGGGGCAGAT 2549565 29 100.0 32 ............................. GGGGCAACGCATGACGGCACAGGCACCTATCA 2549504 29 100.0 32 ............................. GTCCGCGCCAATGACTTCATGCGCAGACCGGA 2549443 29 100.0 32 ............................. AACATCGAGGACGCGTAGACGCCCAGCTTATC 2549382 29 100.0 32 ............................. CCCGCAATGCCGTTCACCCGCACTTTGGCCGT 2549321 29 100.0 32 ............................. GAACCAAACCCCAACGGCGTTAAGCGAATGCG 2549260 29 100.0 32 ............................. GTCGCCCAGCGTCTGGGCGTGTCGCTGACGAT 2549199 29 100.0 32 ............................. CGCCATGGGCGGGGCTGCTAGGTGGTCTGGGG 2549138 29 100.0 32 ............................. GCGCAGGGCGAAAACCCTGTCTGGCAGTTGAC 2549077 29 100.0 32 ............................. GCGCAGGGCGAAAACCCTGTCTGGCAGTTGAC 2549016 29 100.0 32 ............................. GGGTCATCATGCCACCCCCTGCCCCACAGCCG 2548955 29 100.0 32 ............................. AAACCCGCTACTACCTCAACGGCAGTTACTGG 2548894 29 100.0 32 ............................. ACGCGGAAACGAAAGCCGCCCGGGTTTGCGGG 2548833 29 100.0 32 ............................. GGGCAGCGCAAGGGCGGCGCAATCGAGCTGAC 2548772 29 100.0 32 ............................. GCAAACAGACCGCAGCCGGGATGCCGCCCCAG 2548711 29 100.0 32 ............................. TGGCCAGCGATGCAACCGTTATCGCACTTCAC 2548650 29 100.0 32 ............................. CAGCAGAGGCGGCTATTTCCGAACTCGACACG 2548589 29 100.0 32 ............................. ATTGCCGCCGATGCGCTTGGCCTTGACTTCTA 2548528 29 100.0 32 ............................. ACAACTGGGACGGGATCGTTGCCTGGTTCGCG 2548467 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================= ================== 65 29 100.0 32 GCGTTCCCCGCACCCGCGGGGATGAACCG # Left flank : CGCCTTTCGTCGCACGGGGCTGTTGCAAAAGATCATTCCCGGCATCGAAGATGTGCTCGAGGCGGGCGAACTCCCTCGCCCCGATCCACCGCCCGAGGCGATGCCCGTGGCCTTCGCCGACGCGCCACCATCAGGAGACGAGGGGATGCGAGGATGATGGTCATCGTCACCGCCAACGCCCCGCCCCGACTGCGCGGACGACTGGCCGCATGGCTTCTGGAGGTGCGGGCCGGCGTCTATGTCGGCGACTACAGCGCACGCACGCGCGAACGGATCTGGGGGCAGGTGACAGCCTATATCGAGCAAGGCGACGCCGTGATGGTCTGGAAAGCGCCCACCGACCAAGGCTTCGACTTCGCAACCTGCGGCAGAAACCGCCGGATGCCGGTGGATTTCGACGGGCTGAAACTGGTCAGCTTCTTCCCGGAAAAACCGGCCTGAAAATCGGTGCGCTCTTTGACATCGTGAAAACCGTGGTGCATCAATGCCCTACACGAAGA # Right flank : GTCTGGAGAAGACACTATCTTCTCCAACGCCCGCGTTCCCCATATCCGATCTCCCCTTGGGTGTCGCTCGTCGGGGTGATGCTGTGAGACCCTATGGGATGAAAGCGCCTGCACCCCGGATGGGAGTTTCGGCGGCACCAAGGCCAAGGGCCGCGAAACAGGATTTGCGCCGAAAGCCATATCCGCGTTCAGCTACATCGGAAGGAATACGTGTGTGCACATCCAGCGATGTAGCTTTCTATGCACGCTCTTCCTCGTGTTCGCCCTGAGGGAGGACCAAACGATCAGCTCCAGCCAAGCCGGTCTCATCTGACGGACCATTGCAATAGGTGCATAGCTGTCCGGTTTACAAATCCTCGTAAAATCGGTGCAGCACCATATGGTTGTCGAAAGATATCAATCGCCTTGTTTTCTTGATCGCTTGAGGTTTTCACTCTTCTTTTTCGTCAACTGGCAGACCCGTGTTTGGTGCGAGTGGAAGCCTCGGACCAACCATGGTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCGTTCCCCGCACCCGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GCGTTCCCCGCACCCGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [43.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.24 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //