Array 1 249226-253214 **** Predicted by CRISPRDetect 2.4 *** >NZ_UFCH01000004.1 Klebsiella pneumoniae strain 4300STDY6636972, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 249226 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 249285 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 249346 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 249407 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 249468 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 249529 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 249590 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 249651 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 249712 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 249773 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 249834 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 249895 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 249956 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 250017 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 250078 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 250139 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 250200 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 250261 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 250322 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 250383 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 250444 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 250505 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 250566 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 250627 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 250688 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 250749 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 250810 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 250871 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 250932 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 250993 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 251054 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 251115 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 251176 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 251237 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 251298 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 251359 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 251420 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 251481 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 251542 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 251603 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 251664 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 251725 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 251786 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 251847 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 251908 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 251969 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 252030 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 252091 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 252152 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 252213 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 252274 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 252335 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 252396 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 252457 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 252518 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 252579 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 252640 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 252701 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 252762 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 252823 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 252884 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 252945 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 253006 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 253067 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 253128 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 253186 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 66 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //