Array 1 63776-62223 **** Predicted by CRISPRDetect 2.4 *** >NZ_MKIR01000001.1 Floricoccus tropicus strain DF1 DF1_Contig1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 63775 36 100.0 30 .................................... ATTTTAAGTTTTGAACATCTATAACTTTTT 63709 36 100.0 30 .................................... ATTTAAAAATGATAGTGTTGCAAGGTAGGT 63643 36 100.0 30 .................................... TCTCACTCTTGTATCGGTAATCACGAGGTA 63577 36 100.0 30 .................................... TAGTCTGCTAGTTCATTTCTTTGCTTCTCA 63511 36 100.0 30 .................................... ACGTTGAAAATAGGAGAGGCATTCATGCAC 63445 36 100.0 30 .................................... CACCATTCCAATTAACACCTAAATTTGTAA 63379 36 100.0 30 .................................... AATCTTTTAAATTCTGATCCAACGAACTAC 63313 36 100.0 30 .................................... GTATACGTTAGACGAAATACAAAACAAGGG 63247 36 100.0 30 .................................... TAGAAAAGTTAAATGAAATGTTAATATCAA 63181 36 100.0 30 .................................... AGTTGTAGTAGTCTCTAATGCGTTAAGTAT 63115 36 100.0 30 .................................... TTGCAGTGATTAAACTAATTATCAGTAACA 63049 36 100.0 30 .................................... TTGTGACATTTGATGTAGCAGTAAGCAGGT 62983 36 100.0 30 .................................... AAAAAACACATCAATGCACGCAAAGCAGAT 62917 36 100.0 30 .................................... GCTAAAAATTGATTTTATGAAAGTATATGA 62851 36 100.0 30 .................................... GACTAATAGAGCAAGCAAACATATCTAATA 62785 36 100.0 30 .................................... TATAGACATCTATATTAATAATTTTTACGA 62719 36 100.0 30 .................................... ACTTGATATGTGTGATATAGAAGCCTGGAA 62653 36 100.0 30 .................................... ATAGGAGCAGGATATACTTCATCTTCTTCA 62587 36 100.0 30 .................................... TTCTTTTTCTGTAATGATATTACATTCATA 62521 36 100.0 30 .................................... TTCAAAGTTGATAAATGGTCTGATTGGATT 62455 36 100.0 30 .................................... TTTTAAAAAGAATGATGTCGCTATAATGTA 62389 36 100.0 30 .................................... AGAATAGAAATATTAATAATAAAAATGCTA 62323 36 97.2 30 .......................G............ ATGCTAACGATGCTAAAGCTGGTATTCAGT 62257 35 91.7 0 ................TC-................. | ========== ====== ====== ====== ==================================== ============================== ================== 24 36 99.5 30 GTTTTAGTGCTATGTTAAATTGAATGCTTCCAAAAC # Left flank : GAACTTAGAAACAAAATTCATCAACTGAAAAATGAAATATCTAATTTATTAATTGATGAAATTATTGAATATCCTCTGGATTTATCATTTGATGAAATAACTAATATAGAATTGATAAAGTCACTTGGTGTTAAAATAAATGAAAGCTCTACAAGTTTGTACGAAAAACTAATTGATATTCTTAACTTATATAAATTTCTTCCAAATAAAGAACTCCTTATACTAACTAATGTATCATGTTATTTTTCAAAAGATGAGATGGAAGAATTGAGAAGGCATTCGTCTTTATTAGGAGGAAAAGTCTTGCTTGTTGAGCCAAGAAAAGTGTATGGATTTCCACAATACATGTTAGATGATGATTTTTATATGAGTTCAATATTATGATATAATTAGTTCAATATTATGATATAATAAGTTAAATAAAACTATGGGAGATTGAATTTTGAAGCCTTGCTAGGGTTAATAGCATGCTAAAAAACCTCAAAGAAAAATTCTACGAG # Right flank : AGATGATACAGATGAACAAACAGACGACACGTTTTAGTGCTATGTTTTTAATATCTCAAGAAAGATTCTGATCCTATAAAGTTAACGTGTAAATTAAAAAATACAAAAAAGTATGTCTTCGTGCGACATACTTTTTCTCATAATATTATGTTTTAATCAACCAATAAATATTCATCAATCACTTGAGCACATCCTCCGTGATCGTTATCATTCACAACGACATCAGCAAGTGATTTTATATTTTCATTGGCATTTCCCATGGCAACACCAAGTCCTGCAATTTTAATCATACTTTCATCATTATCTGCATCACCCACAGCAATCGCTTGAGATATAGGTATGTTCAAATAATCGCATAAGAACTCAAGACCTTCACCTTTTTCAACACCTTTGTCAGTAATTTCGACACCAGTTTCCTCAGCCTTAACAATAGTAATATTTTCTTTTCTTAGTTCTTCATATGTATCTAATCTATCCTTATCAGTAAAATGGTAAAGGTT # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGTGCTATGTTAAATTGAATGCTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //