Array 1 270666-273314 **** Predicted by CRISPRDetect 2.4 *** >NZ_UKPP01000003.1 Klebsiella pneumoniae strain EuSCAPE_IL028, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 270666 29 100.0 32 ............................. CTGCTGACGACGTGGATCCGCTGGAACGTCAC 270727 29 100.0 32 ............................. TACTGGCAACGGAATTCGGTTCGACGTTTATG 270788 29 100.0 32 ............................. CGCTCCCCAGGACAAACGCGGTCTCCGGATCC 270849 29 100.0 32 ............................. TTGCACGCACGTGAATAGTCCAGGCCGCCTGG 270910 29 100.0 32 ............................. TCCAGCGTGTGCATCTCGCCGATCTCTTTTTG 270971 29 100.0 32 ............................. TAGGGTATCCCGTTCTCATCCACGGCAATATG 271032 29 96.6 32 ............................T TGAACTGATCAAGGGGCGGCTTCAGGCAATTG 271093 29 100.0 32 ............................. AGTAACGAAACGGTCGCACTCAACCGCGCCGC 271154 29 100.0 32 ............................. TCTTGTTAGTGATTGAGTAGCCCATCTGGGAC 271215 29 100.0 32 ............................. CTACCCGTAAAAAAACCGCTGCCGCTGTCGCC 271276 29 100.0 32 ............................. CTCTTAATGGAATTCGTGAAGACGCTGGCCTT 271337 29 100.0 32 ............................. ATCTGGCGAGATTTTACGGGAAATAATATCCC 271398 29 100.0 32 ............................. GTTTTGACCGAGTATATCTGGCGGGATACCCC 271459 29 100.0 32 ............................. GTCCTGGCTGACCCGGACGAATTTGTTGTGAT 271520 29 100.0 32 ............................. GCGGTTTGCTATCAGATGAGCCTGTCATCAAA 271581 29 96.6 32 ............................T GCTGCACGATGTGATTGAGAGATGCCGGGAAG 271642 29 100.0 32 ............................. GGTTTATAGAGGCTGAGGTATTCACAATGCGC 271703 29 100.0 32 ............................. GGCCTGAACCAGAGCACGATCTACACCTGGAA 271764 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 271825 29 100.0 32 ............................. GTTGCGAAGCCTACGTCCAGATCGTAGAGATA 271886 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 271947 29 100.0 32 ............................. AGCTGCGTGACGTTGAAAAAGATGGCTGCGGG 272008 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 272069 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 272130 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 272191 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 272252 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 272313 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 272374 29 100.0 32 ............................. TCTTCGAGTTCAGGCCGGTATCCCACTCGCTC 272435 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 272496 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 272557 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 272618 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 272679 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 272740 29 100.0 32 ............................. TACAGGACGCACTGGCTGCGAAGCCGTTCGCG 272801 29 100.0 32 ............................. TCGCTCTGTGTCATACGGTTATTAGCCCTGGA 272862 29 100.0 32 ............................. AATTTGCTCATAGAATTGAGACAGTAAACTTT 272923 29 100.0 32 ............................. CCGAAATGGATACCGCCGCGATTGAGTATTCG 272984 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 273045 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 273106 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 273167 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 273228 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 273286 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 44 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCTTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGAACGCGTTGCCGTTCGCCAACACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATATAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //