Array 1 674754-675695 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_LGOZ01000001.1 Gardnerella vaginalis strain N101 2528314063, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	============================	=================================	==================
    674754	    28	 100.0	    33	............................	CTAAGGCTTTTTTGGCGTGTCGTAGCAGACTCT	
    674815	    28	 100.0	    33	............................	CTACTAGCGCGCTTTACTTGGTTTGAGACCTAT	
    674876	    27	  96.4	    33	.....................-......	TATTCTGCTTCCGCCTGCCAGCTGCCGCCACTA	
    674936	    28	 100.0	    33	............................	TTAGTAATTGCCCCTCGCTCCATGCGGGGGGTA	
    674997	    28	 100.0	    33	............................	CGAGAATACAAGTTGAAAATTAGTAATTGCCCC	
    675058	    28	 100.0	    33	............................	CAAATAACATGCGCTACGCTTAAAGTATTCTCT	
    675119	    28	 100.0	    33	............................	TTATATATAAAAGACTTCATAAAGGGGACGGCA	
    675180	    28	 100.0	    33	............................	CTAAAAGGAGCCTATTATGTTAGACGAGAACGG	
    675241	    28	 100.0	    33	............................	CGTGAAAGTATTGAATCTTGGAACGCGAGCCGC	
    675302	    28	 100.0	    33	............................	CAATTGCAGATCACTATCCTTTAGAACGCTTCG	
    675363	    28	 100.0	    33	............................	CTACAGGCGCGGCGTGGTCAAGCCGTCAGATAT	
    675424	    28	 100.0	    33	............................	CACGAGCTTTTTGCACACGTGGCTGATGCTATC	
    675485	    28	 100.0	    33	............................	TGTGCCATTTAAGGCGGAAAGACAAGTAGCGGA	
    675546	    28	 100.0	    33	............................	CATAGTCTTTTACAGCATTCACAAAGTATTCTG	
    675607	    28	 100.0	    33	............................	CAGTGCCTTTAAGGGCAATTACAAAAGACGGGA	
    675668	    28	  96.4	     0	..........................A.	|                                	
==========	======	======	======	============================	=================================	==================
        16	    28	  99.6	    33	GTCTTTCCCGCATACGCGGGGGTGATCC	                                 	       

# Left flank :   TTTATTCCTAATAAAATTATTGAGCTAACTGGTATTACAACTAATATGCTTGAGTCTTATGGTGTAGGATTAGATTTAGCATTAAGAGAATTCATTGATTTTATCGGAAAATTACCGATACTTGGATACAATATACAGTTTGATATGTCATTTTTGAATTCTGCTTTATCTTCATTAGGTGAAAGATTTGACGATTCTCTTTTAATTAATAAAATTTTTGATATCTCTCGTTTTGTAAAGAAAGAAAAGAAATTTTTAAAAAATTACCAGCTAAAGACGGTGCTGCACGAATACAACATTTCTGAATCCGTTCCGCATAGAGCTCTTCTGGACGCTAGACTAACAGCGCATCTTGTTTTTAATTTGAAAGGATTGTTAAAATTTATTTCATAAAAATAAAATACTGTTGTACCATGTTCTGTGATAGGTTGAATTTGAAAAGTAAATGAAATTTGACTGTTTCTGTTATGGAAATGGCCATTTTTATTGGGATTTTAAGT
# Right flank :  CTATATAAATATTGTGATACAGTATAACCAGCGTGGGGACCTCGGCAACCAGCTTTCAAGACTGGAACATCAGTCTGAGGAGCACCCCACGTTTTTCAGTTTTTTGCAACGATTGAGCGAGAAAAGAAAAAAGGGTGGCGCGTTAATACCTTGTTCTCAGTTGTGGAAAATAAGAGAGGAGTGAAAAGCTAATGGATATGATGAAAATTTGTTATGACATGGTTGAGAAACTCCGTCCATATGCAGAACCTAACATGGATAAGCTCTCTAAAGAAGCAGCCAATAGTGCTATTAGAGCAGGCGAACCATCGATTGCGATTGATTATTATTTAGTAGACGCGTGGCTACACAAGAGTGCACCTAAAGAGTTGCTAATTGAAGCTTATAATTTGCTAGATTCTTATGAATGCGGCGATGACTATGACGATATAGCGGATGATTTAGGAGTCCCGCGTAAAGTTCATTCCCCAGATGAATAAAGAATAAATTTTATATTAAAT

# Questionable array : NO	 Score: 6.24
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTTTCCCGCATACGCGGGGGTGATCC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [3,7] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCCTTCCCGCACACGCGGGGGTGATCC with 96% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-9.90,-9.80] Score: 0/0.37
# 	Array degeneracy analysis prediction:      R [6-1] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [71.7-58.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.77,0.78   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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