Array 1 131614-131168 **** Predicted by CRISPRDetect 2.4 *** >NZ_VKTL01000005.1 Enterobacter cloacae strain AS012445 AS012445_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 131613 28 96.4 32 A........................... AGAAAGCTTCGCCACCAAAGACTACGGACAAA 131553 28 96.4 32 A........................... AACTCACAAAGCGCCAGGAGAAGCTAAAACAG 131493 28 100.0 32 ............................ TACGGCTGGCTTGCTAACTGGCCGGGTATTAA 131433 28 100.0 32 ............................ TGACAGCGTGGTTAAACCAGAGGGCGAAGAAA 131373 28 100.0 32 ............................ ACCAGCGGCGATGGCTGCTTGGGTCTGATACG 131313 28 100.0 32 ............................ CCCTATCGCGTTCTCAAATGCCTGGCGGATAT 131253 28 100.0 30 ............................ CGCACTTCAGCCAGGAAAGCGTCGGTCTCG 131195 28 75.0 0 .G..........A...C....A..CT.C | ========== ====== ====== ====== ============================ ================================ ================== 8 28 96.0 32 GTGCACTGCCGTGCAGGCAGCTTAGAAA # Left flank : GAAGCGCGCCACGCGCTCACTTTCATCGGGGGTCAACGTACGACCCGCACTTTTACGACGCGCGACATTGCGCTCGTTTATCCCGGTGACGCGCAAAATGTCTGCTTTTGACATCGCCGTCCATTCATGAATGTTGTCGAGTACGCTAACGGGTAGACCTCGGTTGAGTAACTCGATCAGTTGCATACCTCGATTTGCAGGTAAACCGGCATAGCGCCAAAGCGCGTTATCAGCAGGCTTCTGCGCAGGAACCCATGTTCTCATTTTGACCTCCTGATATGTCATTTGTCATGATCTAGTATAGTCATTTGTCTGGTAATGCGAAATGAATATGTTCTGCACAAAGAAAGATAGGGTCAGCAAGATTGTGACCTTAATTTTTGGCTAATGTTTAGTTGGTTGATTTTAAGAAGAATTTAGATGGTGTAAAAAAGAGGGTTGGCAGAGGGATTTTAGCTTTTTTTGGATGAAAATCATGGCAGTGTGAAGATATTATTTCA # Right flank : CGCGTCGCCTGGCGGCGCTACGCTTGCACAGGCCTACAATGAGTTATGTAATTTATTGACATCGACGTAGGCTGGGTAAGCGTAGCGCCACCCGGCAAGAAAGGCGGTTGTATAATAGAGGGTAGGGTTTTTCATAAATTTAAGGCCGGGAATCTCCCGGCCTTATTAAATATTCATCTGCCATTACAGGCGAAAACAATTAGCGACTACGGAAGACAATGCGGCCTTTGCTCAGGTCGTACGGGGTCAGTTCAACAGTCACTTTGTCGCCCGTCAAAATGCGGATATAGTTTTTGCGCATTTTACCGGAGATGTGCGCAGTTACCACGTGACCGTTTTCCAGCTCTACGCGAAACATGGTGTTAGGCAACGTATCAAGTACGGTACCCTGCATTTCAATATTGTCTTCTTTGGCCATCTAATCCTCTGGGGTATCACTACCAAGTTTTGAACCGGCAAGATAATGCCGAAATTCATCAATTAAGTAAAGAATTGCGCGT # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCACTGCCGTGCAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGCAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.70,-5.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 142117-141428 **** Predicted by CRISPRDetect 2.4 *** >NZ_VKTL01000005.1 Enterobacter cloacae strain AS012445 AS012445_5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 142116 28 100.0 32 ............................ ATGATTGGGAAAGACTCATGCACTCAGCCTAA 142056 28 100.0 32 ............................ AGGGATGGGGAGAAATGGGGGCGGCAGAGGTT 141996 28 100.0 32 ............................ GTCGCGATTCGGCAGCCGATCACAGATATAAA 141936 28 100.0 32 ............................ GTACTCGTATTTGCTGACCTGCCGCACACCAC 141876 28 100.0 32 ............................ AGCAGAATTCACAGAGAGCACGAAGGGCAGAG 141816 28 100.0 30 ............................ CGTGACAGCTTAACGCGCGGCGGTTATCCC 141758 28 100.0 32 ............................ CAGCACACGGAGGATTTTTTTCTCGACCAGTT 141698 28 100.0 32 ............................ ATTAAGGAGCAGCGCAGGAAAATTGCCCGTCG 141638 28 100.0 32 ............................ TTAACCTCCTGCGCCTTTTCTCTCGTGATAGC 141578 28 100.0 32 ............................ GCGCCCGGTGTTCGCAACGGCTGGCGCTGAAC 141518 28 96.4 32 ...............A............ ATGGGCATCAAAACTGCTCTGGACCTCTCAGA 141458 27 92.9 0 ...........C............-... | AA,AT [141435,141438] ========== ====== ====== ====== ============================ ================================ ================== 12 28 99.1 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : ACTCCCACAAACGCAGCCCGTATGCCGCTGTCTCGGAGCCTATTTGAAAGAAGTGAAAACCGGCCTCACAGAATCAATGCGTGATTTTCAGGTAGTGGAATTTGAGGACGACGCGGAGCAACCGCGACATAGAGAGTGGTTGCTGGAGGATACCGAAACGAAATGCGACTACTGCCGGGCGTTAAACCATGTGTTGCTGGTGTCGCATGTTGACCGCGATATGTTGCCGCACCTGACGGGGCTGCTCCATGACATTACGCATTCAATGGCGGCAGATGTCTTTGCACCTCAAACTTAAGAACAGTTAATGCACATTATTTCCTGAGTGCGAGCTGAGGAATCGGGGAAGCTCCTCTGACGCCAATGGTTTAACCCTTTTTTTGATGTGTACGTAAATCATTGATTTATATGGTGCGGGTTTACGTTTCTGAAAAAAGGGTTTTATGCGCAAAAGTTGATTATTTTCTTTTCGAACAATAAGATGGCGTTGTTTCCTTTTA # Right flank : CCAATCCTCTGAAATATTCACCCCATCTATTAAAAAGTTAATGCTATCAACCCCACACTCTCTATTTTTCACAATAAATAAAAAAATAATTCACGCACAAATTATATTTTGGCGAATATATTATTTGTAAAAATAATATTTCAAAGCAAAAAATAATTCTTCGCTAGATTATCACTGCAGTTACTATTCGTTTGATATCCATCACATTTGCTTGCAGCTTATCTTCGATAACATACCGCGCATTCAACACTTTGAAATAAAAGCCCTTGCCATGCCCGTCAACAGCATCACCCCAACAGACTTAAAAACTATTCTCCATTCTAAGCGCGCCAATATCTATTACCTGGAAAAATGTCGTATTCAGGTGAATGGTGGGCGCGTTGAATATATCACTCAGGAAGGCAAAGAATCGTTTTACTGGAATATTCCCATCGCCAATACCACGGCAGTGATGCTGGGTATGGGAACATCCGTTACGCAAATGGCAATGCGGGAGTTCG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [50.0-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //