Array 1 101408-100646 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_PTQN01000017.1 Escherichia coli strain SWEC1172 contig000017, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                  	Insertion/Deletion
==========	======	======	======	=============================	=================================	==================
    101407	    29	 100.0	    32	.............................	CGACAAAATTCTCAAAACTCGATCAGGAAAAT 	
    101346	    29	 100.0	    32	.............................	CCACCGTTTTCGCCCACCAGGGCGCACAACCC 	
    101285	    29	 100.0	    32	.............................	GAAAAAGAGAAGGTAGAGAAAGCGGAATCTGG 	
    101224	    29	 100.0	    32	.............................	CAGGTCTATCGGGCGATCAATAAAATCGGTCA 	
    101163	    29	 100.0	    32	.............................	GCGCACCGTTGCGTCGAAAAGGCGCTGGAGAT 	
    101102	    29	 100.0	    32	.............................	TACGCTTACACAACGGGCGAATATTTTAACGG 	
    101041	    29	 100.0	    32	.............................	GAACCCAATAGTGAAATACAGCATCATTTTTT 	
    100980	    29	 100.0	    32	.............................	ACCTGGAGGCGAAAAAGGCGCTTCGACGTAAA 	
    100919	    29	 100.0	    33	.............................	GAGGCCTATATCTCTAACCGCATCGGGCTGCGC	
    100857	    29	 100.0	    32	.............................	GGGCAAATATAAATTCCAGCGTGCTTCATGAA 	
    100796	    29	 100.0	    32	.............................	GGGCAAATATAAATTCCAGCGTGCTTCATGAA 	
    100735	    29	 100.0	    32	.............................	CTGCGTAGCGACCTTTGCTCTCAATTTCGTTG 	
    100674	    29	 100.0	     0	.............................	|                                	
==========	======	======	======	=============================	=================================	==================
        13	    29	 100.0	    32	GTGTTCCCCGCGCCAGCGGGGATAAACCG	                                 	       

# Left flank :   GTCCTTGCTGCAGGTGAAATTGAACCACCACAACCCGCGCCGGATATGTTACCGCCTGCCATCCCTGAACCTGAAACGCTGGGTGATAGTGGTCACCGGGGGCGCGGCGGATGAGCATGGTCGTGGTTGTTACAGAAAATGTCCCTCCGCGCTTACGTGGACGGCTCGCAATCTGGCTACTGGAAGTGCGTGCCGGTGTGTATGTTGGTGATACATCAAAACGTATTCGGGAGATGATCTGGCAACAAATTACCCAACTGGCTGGTTGCGGAAATGTGGTGATGGCCTGGGCGACCAATACCGAATCGGGTTTTGAATTTCAGACCTGGGGAGAAAACAGACGTATTCCGGTGGATTTGGATGGGTTACGTTTGGTTTCTTTTCTTCCTGTTGATAATCAATAGGTTATGTGTTCTTTAAAAATAAGGAAATGTTTGAATTTAGTTGGTAGATTGTTGATGTGGAATAAATTTGTTTAAAAACAGATATGTATGCTTAGT
# Right flank :  GGCGCACTGGATGCGATGATGGATATCACTTGGAGTTCCCCCGCCCCTGCGGTAGAACTCCCAGCTCCCATTTTCCAACCCATCAAGACGCCTTCGCCAACTCTTTCACCAGAGGTAGCATTATCCGCATAACGTCACGGCAGCGACGTTCTATTCTTCCAGGAAGTGCCTTATCAATATGCTGTTGATTATCAAACCTGACGTCATGCCAGCTATTTCCCGCAGGGAATGCGGCTGTTTTTGCGCGTTGCTGATAACCATCCTTATTCCCAAGATTCCAGTTAGTCGCTTCCACCGAAAGTACAGCAATGCCCGCTTTGTCGAATATTTCTGCGTCATTACAACACCCGGTGCCTTTCGGATAGTTTTTATTCAAACCAGGATTGGTCGTCGCGGCTATTCCCTGACTGCGCGCAATTGCCAGTGCCCTGTCGCGCGTTAATTTCCTTACTGCTTCAGGGGTTTTTACACCGCTGTTGAAATACAATTTATCGCCAACA

# Questionable array : NO	 Score: 6.26
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTGTTCCCCGCGCCAGCGGGGATAAACCG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [4,5] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-12.00,-13.50] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: R [40.0-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0,5.51   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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