Array 1 211073-209700 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZTC01000012.1 Klebsiella grimontii strain 06D021, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 211072 29 100.0 32 ............................. TTCGCCAGCACGGAGGCCACCAGTGAAGCCCC 211011 29 100.0 32 ............................. TGGCTGGCGTTTTTCGGGTCGGCATTCAGCCC 210950 29 100.0 32 ............................. TTGACTCCTGCGCCAGGTCGGGGCGCTGCCGT 210889 29 100.0 32 ............................. TTACCGCAAACGCGGCGCATAGCTTGATCACG 210828 29 100.0 32 ............................. CCGATCAAAGTCAAAACCGGGATCGTGATGCC 210767 29 100.0 32 ............................. CATCGCCCCGAGCTTATCCCGGCATATCGTGA 210706 29 100.0 32 ............................. CGACTGCTCGAGATTGCCGACGCGCTGGTCGT 210645 29 100.0 32 ............................. GCACTGAGGACAGAGGCGTGTAGTGTCAGAAT 210584 29 100.0 32 ............................. ACCATAGAACCAAAATCAACCTCAGGGTCAGC 210523 29 100.0 32 ............................. ACCACGAATGAAAATGTGGCCAGGAAAGCCGA 210462 29 100.0 33 ............................. GTTGGCCAGGCATACGCAGCAAATGCCATTGCG 210400 29 100.0 32 ............................. ACTTGTTCAGAAAAAACCCCATTAGGAGGTTA 210339 29 100.0 32 ............................. GGTGCTTGCCTGGGTAAAACTGAACAGGCTTA 210278 29 100.0 32 ............................. ACCATTCTCATCATTCACGGCACGCAGTTAGT 210217 29 100.0 32 ............................. CCGTTGATTTTTTCCGACGCTGGCTCAGTCTC 210156 29 100.0 32 ............................. CGCTTCCGTTTCCTGAGCATATAGGTCGCCAT 210095 29 100.0 32 ............................. CGACCGCCAGCGGCGTTGTTAAACACGCCTGG 210034 29 100.0 32 ............................. TGAAAGAATTAACGCCGGGAGAAATGACGGCA 209973 29 100.0 32 ............................. ACAACGCAGCCAACTGAGATTCAGAAGGCAGC 209912 29 100.0 32 ............................. CGATCCACTTTCTCACCGCAGAGCAAAAAGAA 209851 29 100.0 32 ............................. CCTGCCGTTGACGTCAGACATCAGACACTAGC 209790 29 96.6 33 ............................A GCTCCCGCTGGACGCTTCGACATGTCTGCGAAT 209728 29 82.8 0 .....G......TC.......G.T..... | ========== ====== ====== ====== ============================= ================================= ================== 23 29 99.1 32 GTGTTCCCCGCGCTAGCGGGGATAAACCG # Left flank : GTGCTAGCTGCTGGTGAGATTGAGCCGCCTAAGCCAGCGCCAGATATGTTGCCGCCGGCGATACCAGAGCCACAGCGACTCGGCGACGGCGGGCATCGGGGGCATGGCTGATGAGTATGGTAGTTGTTGTTACGGAAAACGTGCCGCCGCGCCTGCGAGGACGGCTTGCCATATGGTTGTTAGAGATTAGGGCTGGCGTCTACGTCGGCGATGTTTCAAAACGTGTGCGGGAGATGATTTGGCAACAGATTACGCAATTAGGCGGCGCTGGAAATGTTGTTATGGCCTGGGCGACGAATACAGAGTCCGGTTTTGAGTTTCAAACTTGGGGAGAAAATCGACGTAGTCCGGTAGATTTGGACGGCCTGAGATTGGTTTCTTTCCTTCCCATTGAAAATCAGTAAGTTATAAGTTCTTTAATAAAAAGGAATTGTAGAACATAAGTTGGTAAATTGTTGCTCTCTGAAAATTGTAATAGAAAACAAATATATATATTTAGA # Right flank : GTTTTTTCCCATACGCGCTCCGCATTCAGGGAATGTTCCCCGCGCCGCCATTCTTATTATCCTGTACTTTATTTTTTTACGTCATTATTTAGTGTGGCAAAGTCCAGTTCCAGTCAATACTTGCCAAAATTTTTGGCTCATGGGAACAGTGCGCCGTTTTTAACATAGCGCTTATACAGACGTTTTACCGATGCTGGGTTCTGAGCCCAAATCCAACCCGTCGTGCCAGACGCGCTGCCAGATATAAACCTGGTTGTCGGCGATGGACCGCGCGCTGGCAGCCAGTAGTAGAAACAACGGTATTAAAAAGCGAAAACGCATCATGGCGACAGTCCTTGTTGCCAGATTTTATCGTTAGTCTATTTTGAGGTGGGCTTCTTCTCCGCCTTCGCCAGCTCTTTCACCAGCGGCAGCATCACTTTCATCACATCGCGTCCGCGATGCTCAATCCGCCCCGGCAGCGCTTTATCAATATACTGCAGGTTATCCAACTGAAGGTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCTAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCTAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 61469-60220 **** Predicted by CRISPRDetect 2.4 *** >NZ_FZTC01000022.1 Klebsiella grimontii strain 06D021, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 61468 29 100.0 32 ............................. CCTCCGTTCCCCAGTTGCCGGGACATCTGTCC 61407 29 100.0 32 ............................. CCAATTCGATAGGCGCGGTCACGGTCCGTTAC 61346 29 100.0 32 ............................. CCGCGGTTGATATGCGGGGTTTCCCACCAGTC 61285 29 100.0 32 ............................. GCTATCGCGTGGCCAGCTCTGACCCGTCGAAA 61224 29 100.0 32 ............................. CTGGCGAGTGGACTGATAATGGTGCTTCTATC 61163 29 100.0 32 ............................. GCACCCTGTATCCCGCGCGGTGGGTAACGTTA 61102 29 100.0 32 ............................. CGATTGATAAATCCGCTCACACGTCACCCCGG 61041 29 100.0 32 ............................. TCGACGATGACAACGATGATGATGAAGATGAG 60980 29 100.0 32 ............................. CTCGTTCCCGTATTCGCGACAGAGGGCATTCG 60919 29 100.0 32 ............................. CTTATCGGTAGCGCACAAGCGGCGCTCTACAC 60858 29 100.0 32 ............................. TCCTCGATACAGCCTGGCCGCGATACCGTTAT 60797 29 100.0 32 ............................. GGGACCGGATAAATTCGAACATCACTTTCAGG 60736 29 100.0 32 ............................. CGTTTTGCCGTGACACCCTCATCCCAGTAATC 60675 29 100.0 32 ............................. GTGTCTCCATCCATAAGAACGAAGTGAGTGAC 60614 29 100.0 32 ............................. GTCCATGATGTTGTGTTTTTTCACCCAGCTGA 60553 29 100.0 32 ............................. GTGATATCCCTTACCCAGGCTTCAAAAAGTTG 60492 29 100.0 32 ............................. TGCGCGCGCTTCTTCTTCATCCGCTCCTTTGG 60431 29 100.0 32 ............................. GACTTATAGCCATCGCCCATGTCGAATACCCA 60370 29 100.0 32 ............................. GGGCGGCCGGTAGTCGTCCTTTCCAATAATGA 60309 29 96.6 32 .............T............... AACAGCCCACAAAACTTTTTGCATGGGGCCGC 60248 29 93.1 0 .............T..............A | ========== ====== ====== ====== ============================= ================================ ================== 21 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CGCGATATCGCGGTGTTCTCAAAGGGCAATATTCAGCGCCTGGTCGGCGCGCTGGCGGAGAGCCATCGCCTCACGCTGCATACGCGTTATCAGGTTGACTATATTGAAACGCTTTACGGCCTGGTGCGTTCCCGGCTGGCGGTGGCGATTCTGCCTGAGCTTTATACCACTCACCTTCAGGATCCGGCGTTAAAGGTGGCGCAACTTCAGCAGCCGGCGCTGACGCGAACCGTGGCCCTGATGCGCGGGCCGCAGCCTCTGCCGCCGCTGATAGAAGCGTGTTTTACATTATTACTGAGTTCGCTGCGGGAAGTGAATCTGTAGAGGCCGTTGCTCTCTCAGCTTGTTGTGGTGAAATGCGAGAGAGGTAACGGAATAGTTTCTTGTGCCTTTTAAAATCAAATAGTTATGGCTCTTTAAAAAAATCAATTTGTTGCAAAAATGTTGGTAGATTGTTCTTGGCGGATAAATTTATTATAAAACAATAAGATATGGTTAGT # Right flank : CAGTCAATGTTTCCCGAACATGGTTCTAAAGAGTGTTCCCCCGCAGCTGGCCGCCGCGGGGGCTGATTTACGGCGTCACGATATTGAACCAGAACTCAAATTTATCCATATAGCCCAGCATCTCATCCAGCTTCGCGCCATCGCCGGTCACTTTCACTTCACCCTTATCTTGCGCCTGTTTTAGCGTTTCCTCTTTCAGGATGATTTTGTTCAGCGTGGCGCGATCCAACGCAATGGTAGCATCCGCGTCCTTGGCTTCGGCATCGGCGGTGTGGTTGAGCACGCCGTTTTCCAGCTCCAGCTTATATTTACCGCCATCGTTACCCAGGTCGATATTGAACACCGCTTTGGCGGTTCCGGCTTTCTCACCATTAATATGCACCGCAAGGTAATCGAAGAACATTTCCGGGGTCATCGCCCGTACGGTATCCGGGCTGGCGGTGTTCGGCGTCGGGCCTTTCACTACGCCGTTGCGTAGCTCCTGAGCGCCGGTCAGGTAG # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //