Array 1 11824-12511 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGRP010000086.1 Halomonas sp. ISL-60 ISL60_143, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 11824 28 100.0 32 ............................ TGAGATTTTGCGCATGAATGCTGCAGTACAAG 11884 28 100.0 32 ............................ TCGCTTAAAACTATCTCCGACTCTATCAATCA 11944 28 100.0 32 ............................ TCAAACGCTTTATTGAACTCGCTGTAATTGAT 12004 28 100.0 32 ............................ AGAACGGGCGCGGGGTTCTGGTTGAATCGCCG 12064 28 100.0 32 ............................ TAGCGTCGACATTGCGTTCAACGAAGCTATCC 12124 28 100.0 32 ............................ CGTTATTCAACAGATGCTAGGGCATGAACAAA 12184 28 100.0 32 ............................ GTGAAGAGAGGGGTTCAGGTTTAGGGGTTCAT 12244 28 100.0 32 ............................ GCGAACAGCGCGGAAGCATAATCACACTGAGA 12304 28 100.0 32 ............................ AGCTCAAGCCGACGAATTTCCGCTGAATCGCC 12364 28 100.0 32 ............................ AGCAGCCTGGGTATCTTCATTGCCAGAAAATT 12424 28 100.0 32 ............................ TAGCCACGCTGAATAACTTCGGCACCGTGCGC 12484 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 12 28 100.0 32 GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : CGCGTTTGCAGCAGCTAATGAGCGCCGACTGGCTAACGGGTATGCGCGATCACACCCAGGTGAGCGAGGTGCTTGCAGTACCTGCTGATGCTCAACACGTCAACGTGGCGCGTAAGCAGTTCAATACGGGCAGTGAAAGCCGAGCCAAGCGCTACGCTAAACGGCATGATATTTCCGAAGAAGAGGCGCGGAAAATTTACGCTAAGTTGGCCGAACGGCGCATTGAGCTCCCCTTTGTGCAGATCAATAGCCGCTCCACACAGCAGCGTTTTAGCCTGTTTATTGAACATGGCAAACCGGCCGCGTCTGCCACGGATGGCACGTTCAGCCATTACGGGCTAAGTCCCAACGCCACGGTGCCCTGGTTTTGACCCTTTTTCTCAGCAATAAATTAGGCCACCAATAATCAACCACTTAGCGGTATCGCTCAAAAAAGGGTGATACCGCTTTTTTCGGCTAAAGCTCTTTAACAATCAGCACATTAATTTTGATATGCTCTA # Right flank : | # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [66.7-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 51453-49686 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGGRP010000003.1 Halomonas sp. ISL-60 ISL60_25, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 51452 28 100.0 32 ............................ GTACCGGCAGCCGAGGAAGAAGACCCGGAAGA 51392 28 100.0 32 ............................ AAGTGTTGGGTCTGACACTGGCAGGCTATGAC 51332 28 100.0 32 ............................ ATCTACTCCCGAGCAGGTGCGCGCTGCGCTGG 51272 28 100.0 32 ............................ GATTACGTTCCCCGCGCCGGTGCCGACCTGGG 51212 28 100.0 32 ............................ TAGCCGGTAGGTCTGATTGTTCTCTCGCACAA 51152 28 100.0 32 ............................ TGCTTATCATCCGCCACCACGCCTCGATCTTC 51092 28 100.0 32 ............................ GTATAGCGCTGTCCGTGGGGGCCGTGGCCTGG 51032 28 100.0 32 ............................ AATGTAACGCTGCCCTACACGCCACTCTCAAG 50972 28 100.0 32 ............................ ACGGAAGGCGCGCTCTTCACTCATGCCGCACC 50912 28 100.0 32 ............................ TCAGCCGCTCGCTATTTGCGTGCCAATGTAAC 50852 28 100.0 32 ............................ CTCTAGTTGTGCTTCGATTCCCATCTTTGTAA 50792 28 100.0 32 ............................ TTTCCGCCAGTCCTGTTCCTGCCGAGCGATGC 50732 28 100.0 32 ............................ ATTACATCGCGGCTTCTGGGTTCCAGCGGATG 50672 28 100.0 32 ............................ TGAACTCAGGCCTCCGACATGAGCAGTGATAG 50612 28 100.0 32 ............................ TGCCCCCAGTACAGCCGGTTTAGCGTTAGTAC 50552 28 100.0 32 ............................ ACTGGCTTGATTCAGTTTATGCCCGCTACTGC 50492 28 100.0 32 ............................ TGATCCCTCAGCAACCGTTAGAACAAGAGCGA 50432 28 100.0 32 ............................ TTACCCATGCTCCACCTCCGCTAGCCGCTTTC 50372 28 100.0 32 ............................ TCCTTCGCTTCGATGAACGCCAGCGCATGCAA 50312 28 100.0 32 ............................ TCAGGAACGTGCTTCACTAAAGCAGGCTGCCA 50252 28 100.0 31 ............................ TACAGAAGGACGGTGCCAGCCAAGCGTTTCA 50193 28 100.0 32 ............................ AGCAGGATATTTATGGCCAGCGAGAATATTTT 50133 28 100.0 32 ............................ GACACGGTCGACCAGCTGGCCCATCTGCCCTG 50073 28 100.0 32 ............................ ATGCCGATATATCCTGCGTTGCTTCGGGCGCT 50013 28 100.0 32 ............................ AAAATGCTAGGCATCAGCCGCCAAGGCTATTC 49953 28 100.0 32 ............................ AATGTCAGTTTAAACGCCTCGCTGCTGACGAG 49893 28 100.0 32 ............................ ACCCGGAAGTGGGCCTGGAGGATTACCGGCGG 49833 28 100.0 32 ............................ TTGAAGTAGCCGATTAACTTGGTTATGTCTTC 49773 28 100.0 32 ............................ CAAAGCCGATCGCCGGGTTGGCCATAGGGGCA 49713 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 30 28 100.0 32 GTTCACCGCCGAGCAGGCGGCTTAGAAA # Left flank : CACACTGATTGACGCTATCCGTGATGCAAAAGCACTGACAGAGCAGGCTGTTATTCATTACCCCCGGGCAGTGCCGGAAGATTACGATGGGTCGTGGAGCATCTATCAGCGATTCCGTATTCCGGCACGCCGTTCAGAGCGCATACCAGGCCGGTCGGTTCGGCTCAAGCGCGTTCAAGAGGCCAACGCAAATGAGCTCTCCTTCTTTCAAATGCAGAGCAACAGCAATGGAGGTCGGTTTCGGCTTTACTGGGAAGTAAAACCCCATTCGGACGGCATGTCTGAAAATAATGAGGCACACCCAGACTCCTGGGGACTTTCAACAACGACAAGCCCAATACCCTTACCAGACATCAGCTAGTCAATTTGACCCTTTTTTTCACAGACCTCTACTCATCTATACAAAACAATTACTTAGAGCATGTACAGAAAAAAGGGTCTTTTGCTCTTTAAAACTGCAAACATCTGATATTATTAAGAAAGACAGGGTTAAATCTCTA # Right flank : GATAATCGTGCAGGCGATGCGTTGTGCGGCAAGTTCACTGCCGTGCATGTCAATCATCGCCCTGCGCTCATACAGCCAAACCTGTGCTAACATTTGTACACACGCGTAGATTTGAATAGGAAATCACTATGGACACCAGAATACAGTTTCGTGTTGATGAAGAAACAAAACGCTTAAGCCAACAAATGGCTGAGAGCCAAGGGCGCACATTGAGCGATGCCTGCCGGGAATTCACTGAGCAGTTGGCTGAGCAACAGCGCAAGGTGTTATCTCACGATGCATGGTTGACACAGCAAGTTAACCAGGCGTTTGAAAAACTTAATGAGGGAAAAGCTTCCTTTATTGATCATGAAAGCGCGAAAGCACAGATGACTGAACGCAAAGCTAAAATCCGTCACCGAGCTAAACCATGATTTTTTGGGAAGAAAAATCGCTTAATGATCGGGAGGTAATCTTCGAGTTTCTTCACGACTTTAACCCATTAGTGGCTGAAAAAACTG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACCGCCGAGCAGGCGGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACCGCCGCACAGGCGGCTTAGAAA with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.20,-9.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //