Array 1 249699-253626 **** Predicted by CRISPRDetect 2.4 *** >NZ_UIWQ01000002.1 Klebsiella pneumoniae strain EuSCAPE_PT071, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 249699 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 249758 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 249819 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 249880 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 249941 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 250002 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 250063 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 250124 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 250185 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 250246 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 250307 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 250368 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 250429 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 250490 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 250551 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 250612 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 250673 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 250734 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 250795 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 250856 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 250917 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 250978 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 251039 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 251100 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 251161 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 251222 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 251283 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 251344 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 251405 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 251466 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 251527 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 251588 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 251649 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 251710 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 251771 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 251832 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 251893 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 251954 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 252015 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 252076 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 252137 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 252198 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 252259 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 252320 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 252381 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 252442 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 252503 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 252564 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 252625 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 252686 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 252747 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 252808 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 252869 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 252930 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 252991 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 253052 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 253113 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 253174 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 253235 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 253296 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 253357 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 253418 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 253479 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 253540 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 253598 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //