Array 1 28879-31778 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAFHHB010000021.1 Klebsiella aerogenes strain Survcare395 NODE_21_length_79052_cov_11.2943, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 28879 29 100.0 32 ............................. CCTATCTCCCGATTTTATCGTGGGATACATGC 28940 29 100.0 32 ............................. AGTTCGGTATCACTGCTCCACTCGATCAGGCA 29001 29 100.0 32 ............................. CACACCCCATGACGAACGCCAGTTAACGATCC 29062 29 100.0 32 ............................. GCGGGTTAAAGTATCAGGGTGTCACGATGAAC 29123 29 100.0 32 ............................. CAGCAACCCTGCTGTTCAGGCGCTGGCTCTGC 29184 29 100.0 32 ............................. GTTGGAGGGTTTGTTCAGGGTATGGATAAAGC 29245 29 100.0 32 ............................. TCACTGCCAGCATTGAAGAAGCAACTGGAAAG 29306 29 100.0 32 ............................. AGTATTTTTAACAAATGATGTAAGCATTGCTG 29367 29 100.0 32 ............................. CTTTCGGATTTAAAATCTACCGTTTTATATTC 29428 29 100.0 32 ............................. AGTTCCAAAAACAGTAACACCGCGCCCATCAC 29489 29 100.0 32 ............................. GCGATAACGAGGCGGTGGCGCGCGTGCTGACT 29550 29 100.0 32 ............................. TCGCACACCCGGAGCCGCCAGACCGGCACGTG 29611 29 100.0 32 ............................. GTTTACGATCGTTTGACCGGCGGCTCTCGCGC 29672 29 100.0 32 ............................. TCGCGGTAATCTGCCCGCTGTCCTCGTCGAGT 29733 29 100.0 32 ............................. CCTTGCATAAAAGTTGTAAGTTGCTTTCATCG 29794 29 100.0 32 ............................. GCTCCAATAATAGTATTACCTACTGGTTCCGG 29855 29 100.0 32 ............................. AATCATCCCTAAATTGTCAAACTGACCTGAAA 29916 29 100.0 32 ............................. AAAGACGGATTTCTGTAAAAGTTAACGCCTCT 29977 29 100.0 32 ............................. GCGGCAAATCCGGCCATGTGTTTTCTGAATAC 30038 29 100.0 32 ............................. GTGAATATTTCCGTGTCCCTCAGGGCACTGGA 30099 29 100.0 32 ............................. ATTGCCTTGATAGGTGATTCTCTCACCAATCG 30160 29 100.0 33 ............................. GATATTACGGCGGCGAACCAGGCCATCACCAGC 30222 29 100.0 32 ............................. CCCAGAGAGAAAACCGATACTTACCGCCACCA 30283 29 100.0 32 ............................. GCAATTGGGCGATCATTTGGGCCTTATTCATG 30344 29 100.0 32 ............................. CCGTGCGCAATCTGGCCGCAAAAGAAAAAATC 30405 29 100.0 32 ............................. AAAAATTACATCCAGCTAATTCCGGGGAAACC 30466 29 100.0 32 ............................. CCGCTATCGCCTCAAAATCGCTCAGCGCCTCC 30527 29 100.0 33 ............................. GACCGCATGGTCGAAATTGATGTTGGTCTTGAC 30589 29 100.0 33 ............................. CCAGTATTCAAGGGCAGGCAGGCCGCCCGCCGC 30651 29 100.0 32 ............................. GTGAAGGATGAGGTATGCAATACGGTTAAATC 30712 29 100.0 32 ............................. CCGCGCCCAGACCGTTGATCGCTACCGGGTGT 30773 29 100.0 32 ............................. GTTCGACACCCGACCTGTAATGGCTGTAATAG 30834 29 100.0 32 ............................. TACATCCGCCGGGCAGCAGTGCTTGACCCTGC 30895 29 93.1 32 ...........T....T............ CCTCGCATCACGGTTCCGGATCTCGGGCTGAA 30956 29 100.0 32 ............................. ATAATTTAGTTTTTGGCAAATGGCGAACAACC 31017 29 100.0 32 ............................. CGTGTCAGCAATGACTACCTGATCGGGTGTTT 31078 29 100.0 32 ............................. CAGTACATCTCCACGCTTTCACAGGTTACCGA 31139 29 100.0 32 ............................. AGTTATGCGATACCGGCGTCAACATGGGGCCG 31200 29 100.0 32 ............................. GAGTGGGGGGATATTCGCCAGCGACTGTCTTC 31261 29 100.0 32 ............................. GAAAATCGAGGATGGTTCATCCACTTTGCGAC 31322 29 100.0 32 ............................. CTTGGTGGCAGTGGTTCTCATACTAACAACTG 31383 29 100.0 33 ............................. GGCCCCGATAATCATCAGGCCATCATCCCCTCC 31445 29 96.6 32 .............T............... TGCATCACCAACGTAAACAGGCCACTTAACAG 31506 29 96.6 32 .............T............... GATGTCTTCAGGTTCAATGCCGCGATAACTGC 31567 29 96.6 32 .............T............... TGTGGCTGTATTGTCGAAATCGACCGGGAACC 31628 29 93.1 32 G............T............... AACGCATAGGAATCAGCAAAAGGAGTCTTGCA 31689 29 93.1 32 G............T............... GGCACATCGGGTAAACAAACGTTTTCTGGTAT 31750 29 82.8 0 G........C.AT.C.............. | ========== ====== ====== ====== ============================= ================================= ================== 48 29 99.0 32 ATGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTTCTTGCCGCAGGAGAAATTCTGCCTCCTCTGCCCCCTGAAGATGCACAACCTGTAGCGATCCCACTTCCCGTCTCTTTGGGAGATATCGGCCATCGGAGCAACTGATAATGAGCATGTTGGTTGTTGTGACAGAAAACGTACCTCCTCGTCTGCGGGGGCGGCTTGCCATCTGGCTGCTGGAGGTTCGTGCAGGAGTGTACGTTGGTGATACCTCAAAGCGGATCCGGGAAATGATTTGGCAACAGGTGAGACAGCTTAGCGATTGCGGAAATGTGGTGATGGCTTGGGCGACGAACAGTGAATCTGGTTTTGAGTTTCAAACCTGGGGAGAGAACCGCCGCATGCCGGTAGATTTGGATGGCTTGCGATTGGTTTCATTTCTTCCCATTGAAAATCAGTGAGTTGCATGTTCTTTAATAATATGAAATTGTTGGAATAAAGTTGGTAGATTGTCGTTGTCTTAAAAAATCATTATAAAACAGTAGTATATGTTTAGT # Right flank : GTCTGCAACCGAGTCTAAGGTAAAATCAGCACCGTATTCCCCGCTCTTACCGTTGCAACCCTACAAAATATATCTTTGCCAACAATTTCATTCTCTATTTAACTTATGTATCTAATAAAAATTCATATAGCCTATGAAAATTATTCGCTTAATGAATAATTAAATCTAATTAATAATATTAAACGGCATTGTAAAAAATGCTTGTTATTTTTATTTCTATCCATTTAATATGTCGAGGTTGCATTAATTACTGATTTACTAATTCTTGCTCGGTATTATATGCAATATGAATGGAATCTGGTTTGTTATTTATAATGGATGAGGGGAATCTCAGTGAAATAATATAAAGCTGTTATTTATCAGCAGGGTATGCTGGGTAGTCTGTTGTTTGGCGCTTCTAAAGTTGATCCGGTAAAATTCTCTGAGTTCCTGAATAAAAATGCGAAAGAGGGCTGGCGCGTCGTGACCATGGAAAAGGACATCCGCCGCATGATGCTCTT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched ATGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [75.0-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //