Array 1 5399-5670 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZGO01000053.1 Gilliamella apicola strain wkB292 Gilliamella_apicola_wkB292_contig57, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ============================== ================== 5399 31 100.0 29 ............................... AGTATAAGCCTGAGCTGAGGCTCGGCTGA 5459 31 100.0 29 ............................... TGGCAGAATAAACGATAACAATGATTGAC 5519 31 96.8 29 .A............................. CAATTTATCGGTTGTTGAAGTAGTATCAT 5579 31 96.8 30 ..T............................ GGCATCCGTTCGCATTGTTCCTGCACCTGA 5640 30 83.9 0 ..-.................C.......TTT | A [5665] ========== ====== ====== ====== =============================== ============================== ================== 5 31 95.5 30 CTAGTTTAACGCCGTGTAGGTGGTTTAGAAA # Left flank : TGTTACGCGATGGTAGAGAGCAAGCGCAATGGCAATGCTTACTTGAACAAGTCCATTGTGCTTTGTATCTAAAATGTCATCAATTAGGTGGTCTTCCTTCTGCAGAACATGGTATTGGTACTGCTAAAGTTAACTATTTTAAGCAGGCCATACCAGAAGAAAATCGCCAATTAATGCAAGCAATTAAACAGCAGTTTGATCATAAAAATATTCTTAATAATCAGGTTTATATTTTGCAAATTTAGATGTTTTTTATTTTTAATTTACTAAAAAGTCTTTGATGATAATCAAAGACTTTTTGTTATTACCTAAAGCAAAGACCTACTAATAAAAATAGGGTAACTTTACAAGTTCAATAAACATCATGACAAAACCCTTTTTTTTACTATAATTTAAACTTGTTTATAATCAATAGGTTAATTTTTAATGTAAAAAAAGGGTTTTTAAGCCTAAAACAAAGATTTATCTTTTGCCCAACAAGCGTTATAGTGTATTGGTTT # Right flank : TTTAAAATTCCATTTAAAGGATGGGATTAACGGTTATGCCAGATTTATCTGAGTTAGATAAGTTGTTTTTGTAATCATTTTAAGGTTATGAATCATCCCTTTACCAATTGCGCCATATTGTTTTATTTGTATGATTAAATTAAGTATTCTTGAGTTTAGTCTCTTGCTTGTTTTATGATTTGATAATTTTAGTATGTTATTTGGCCTACATTAAATAGTGAATCTTGGTGGTACACATTACTCTGCTTATTAAAAGGTATTAACTTGTGATGCAGGGCGTCATAAATGCAAAATCTTGTTAAATCCTTTATCAATAATTAACATTCTGGATGAGGTTTTTGAGTACAATTTTTAAGGGATATATGCTAGAGTTGAATCCCTTATTTTTCGACTCAGTAGGGAGGTAGGTCTTGAATCTTTCACCTAAAGCGTTTCATTATTTGGGCGTAATTGCTACTATCGCTTCACTTGGCATGTATGTTTCTTATATTCCACAAATC # Questionable array : NO Score: 2.76 # Score Detail : 1:0, 2:0, 3:0, 4:0.78, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.92, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTAGTTTAACGCCGTGTAGGTGGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.06%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.40,-0.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 6548-6102 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZGO01000057.1 Gilliamella apicola strain wkB292 Gilliamella_apicola_wkB292_contig60, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 6547 28 100.0 32 ............................ AACCGAGGCAAGAAATTCGTGGCGTTATTGCT 6487 28 100.0 32 ............................ GTAGCGTCACGTTAAATGGTATCTCACGTTCC 6427 28 100.0 32 ............................ TAACGCCCCCTTTTTGGTGGCAATCATTGGTG 6367 28 100.0 32 ............................ TTTTTAGAGCGCCAAGAAACAGATTGCAGGAA 6307 28 100.0 32 ............................ TTTATTTGTGATTTCGCAAATTGACGTCCTAC 6247 28 100.0 32 ............................ TACTGTTCGTGAGGAAAATTCCGAAATATGGG 6187 28 100.0 32 ............................ TTTATTAATTCAAATGAATTTAATCGGTAAAA 6127 26 82.1 0 .................C..A--..T.. | ========== ====== ====== ====== ============================ ================================ ================== 8 28 97.8 32 GTTCACTGCCGTGTAGGTAGTTTAGAAA # Left flank : GATATTTTATTTCAAAATAATTATTATTTAATGATATTATCAGGATAATAAACGTTGAAATCAACCCTCCAAGGGGATTGATACCTGTTATTTTTTATATAATCAACTGATGACAATTGCACAATTGTTTCTTGGATAATGCTAAATATCAATGCTCTGCGTGTATAACTTATTTTATATATCATCGGTCATTTTTTATATCGTAGATTACAAGATAATTAAACCTGTCAGCATTGCTAAACAGCAATTCTCATGACTGAATTTATATTGAGTATTAAGCTATGGATATTTTGCCTAAAAACTTCGCGACAAAGCTGTTTATAAACTCACAATTGAATGCTAACGCGTATACGACTAACCCTTTTACCAACCCTTTTTTTTCACCAGATATAAAAAATAATAAAATCAATATATTACAAAGCACATAAAAAAAAGGGTTTTTTAGTAGCAAAACATCATTTACCTTTCTGCCAACAACAGTTATAGTGGTTTAGATTCTA # Right flank : TGTTTAGTCTTGAAATTGTGATATTTTGCAAGGCTATCTTTTATTCGTGATATATTGCTCTTGATTGGTTAATAAATACCAGAAGATTTTCAGTTAATAATTATTGCTGATAGTTGGTTAATTTGTTTATAAAACGATAGAACTAAGTTTTTATATTCGTTTTGGTTGACACCTGTAAAGCCGGTATCAACCTTGAATAAGCTAGGGTGTTTGCATGCGAACAGTATTTTACTTATCTATGTCAGAAATTTGTGTTTACTCCGCAAACTTATTTTTATGATCATACCGGTTGTAGTGGATGTCATCACTAATCAAATAGTTATAAATATCATCGACAATTTCGATACCATTTTTTAGGTAGTCTGCTTCACGTTTTTTGCCACGTTCACCAGGAAAGAATACTTGGCTATTGCCTTTAGCGGGTTTGACATTTTTTAATTGATCGAGCATCGAAGACATAGTTTGTTTGAATATTTCAAGACCGATAAAATATTCTGGGT # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGTAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.62%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGTAGTTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.00,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 87427-87634 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZGO01000063.1 Gilliamella apicola strain wkB292 Gilliamella_apicola_wkB292_contig66, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 87427 28 100.0 32 ............................ TTTATCGTTAGCATTATCAGCCAATTTAATTA 87487 28 100.0 32 ............................ TTACGTCATGCCAATTATTGATGTCTTTATTG 87547 28 100.0 32 ............................ GCCAATTTAAATTCTTTGTATTTAATTAAGTT 87607 28 89.3 0 .....................CA.A... | ========== ====== ====== ====== ============================ ================================ ================== 4 28 97.3 32 GCTCAATACCGTGTAGGTAGTTTAGAAA # Left flank : AACATAAATATATTTAAGCTAAACTAATAGAACGACTTCAACAATTTCAATACTTTTGCAGTAAGCGATCTTAATATACCTAATGCACTGTTTCAATGTAATGGTCATAATGTGCAGCTATCCATATAAACTCAAAGCTAACAAGAATATTTGACACACTCCCTTAACGTTGCGATTTAAAATATATTTTTGTTTATCAATGGTAGTTGTTACTGTTTTGAATAAAAAGCAATTGATGTATTTTTAATATTGTTAAATAAATTGTCGAGCAGAGTAATTATAAATTGTAATTTGTTCGCATTAGATTTCAAACAGACTGTTTCAAGTCAATATCATTGAAACATTATCAATAATTACACCATCGTTTTTACCCTTTTTTTTCGCTAGATTTAAAGATTAATAAAATCAATGTATTACAAAACAGTTAAAAAAAAGGGTTTTTAAGTAATAAAACAATATTTACCTTTATGCCAAAGGCGATTATAGTATGTGCTGTTCTA # Right flank : AAGCAAAAATTTGAGGAAGTAGATTTTTACGGTTTAATAGCCTATCCGCAGGAAGCCTTTAGTTTAAGCATATAAAAATGCCCTAAAGTATTTCATTAAGATAAATGGGTTAAGTATGAAATTGTAATTATGTGCCTTTATTTCAACTTTATATCAACTATCACCTAGCTTGTTTCAGCTAATAGCCACACATAAACAGACATTTTGATGTGCTTTAAGCAACACACAATTAATACATAGGCCCTTAACATTCGCGGCATATATTCTTTTTTTGTATTCAGACAACTCAATCTTGTTAAGTTCAATATAGCAAAATATCTGCTCAAAAATTCTGTTTAGACTGATTATTAAATACCTTTACCACAGCTTATTTTTACAATTTATAAAAACAAGAAAGATTAAGCTTTATTAACAATGAAGGTAAAATTTTTGTCTGTTTGTTAAGTATTGCTAAAATGTCTTAGGTAGTTGAATGATAAAAATCAACAGTTAATTGATTA # Questionable array : NO Score: 2.72 # Score Detail : 1:0, 2:0, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTCAATACCGTGTAGGTAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.71%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.70,-2.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 21104-20956 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZGO01000072.1 Gilliamella apicola strain wkB292 Gilliamella_apicola_wkB292_contig74, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 21103 28 100.0 32 ............................ GCTGTCATTAATGCAAATGAACGGGTTTTAGC 21043 28 100.0 32 ............................ TATTGTCGGTGCGCCTAAACAACGTTTGCAAG 20983 28 89.3 0 ......................A.AT.. | ========== ====== ====== ====== ============================ ================================ ================== 3 28 96.4 32 GTTCACTGCCGTGTAGGTAGTTTAGAAA # Left flank : TTTTTATGAAGAAGGCTTCTATTATAAAGCAATGGACATGGAAGGGGTTTTCTACTGGGAGGACTTTATGTGTATTATGGTAACGCATGAAGTACTCTCTTTCAACTTTTGCCCAGCCGAAACACCAAAAGGCAAAGAAATGAAAAAATTCTATCCGCGCTTAGATACCTTTTATATGTTCATTCATGGCGATCGGCAAATACTAGAACTGATGATAATCCTCAGCCAAGAAATTGGTGATCTGGTTGAGTTTAGGTAGACATAGGAGATTTTGGGTTAGTTTGGTTTTTGGATGTAATTATCGTTATGAAAAAACATTAAACTATTAACGTCTGAAATTCTACCTAATCCAAATTATGCGAGTTTTTAACCCTTTTTTTTGACCTTATTTTAAATCAAATAAAATCAATAATTTACAAGTTCATTAAAAAAAAGGGGTTGAACCACCCAAAACACTATTTACCTTTGTCCAAACACAGTTTATAGTATTTGACACGCTA # Right flank : TCCTCTCAGACTAAAAGTCTACCCAAAATCCAAGGACAGGCGTGCGTTTTCGTATAGCCTTCCTAAAATGACAAAGTCTATTAAAAGATCTAAAATAGTTCCACTCACAAATATAAAAATAGATAAATAAGTTATTGATATTGTTAAATTTAATATTTGCACAATGATAAAACGCTGACAAATGAGAGTAGTGCATGTCTATAGGATGTTAGGTAAGGTACGGCCTTTGTTAGCAACAAATCAGCAAACTACACAACGCGAAGAACAAGGGACGTTGCAGACCCCCTTTCTAGCATTTTGTGGCGCACATTTTTATGGAAAAAATTTGAACAGATGATGGTTCGAAGAGGTAAGTATCCTAGATGACACAGGTAGCTTCGGGGGATTTTTCACAAATCTCCCAATTCGGGCGTTTTTACTGAAAAGAAAAATCACCCAATTATTAGTGCCCAAAAATTAAGAATTAAAGAAACGAATTTCTTAATAAATAGAAACAATTC # Questionable array : NO Score: 5.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGTAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGTAGTTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [58.3-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.87 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 93369-93040 **** Predicted by CRISPRDetect 2.4 *** >NZ_LZGO01000078.1 Gilliamella apicola strain wkB292 Gilliamella_apicola_wkB292_contig8, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 93368 28 100.0 32 ............................ AGCCATAAAAAAACCGCACTAGGCGGCTATTG 93308 28 100.0 32 ............................ GTATTGAGTAAATTCTTTAGTGAACTGTGAAT 93248 28 100.0 32 ............................ TTTTATTGTATTTGCAGATAACGCTAAAAAAG 93188 28 100.0 32 ............................ ATAGTCTGCCCACGTAGGGGGATTGCTAACAA 93128 28 100.0 32 ............................ GTTTCGTCAAATATTTTTATTGTTCCGTCTTT 93068 28 89.3 0 .................C..A...A... | G [93047] ========== ====== ====== ====== ============================ ================================ ================== 6 28 98.2 32 GTTCACTGCCGTGTAGGTAGTTTAGAAA # Left flank : TACCTAAGGTTAGGTGATATTTACAAGATTTCTAAACTATTTATACGGCAGTGAACTTAACGAGTCGAGGAGGTCAATTATCTCGAATTTTCTAAACTACTTACAGAGTAGTGAATAAAAATACAGACTAATAGTAAAAATTACAGAGTGTTAATTAATTGTCCTATCTTGGGTAAAAATAAAATCAATGTTAAAACGTCGAACTTATTTATTACGTTAGTCACAGGTTATCAGCAATATATTATTGATTTTATTTTCTTACTGTAACCTGATTAATTGATTGATTTTTTGCTAAGAATTATAAGGCTATAAATAAATTTTAGCTTTATTACAGCTGAATAAATAAAACAAAAAATTCCCCTTTTTTTAACCCTTTTTTTTCGCCCATTTTAAAAGTTAATAAAATCAATAGATTAAAAATAGCTACAAAAAAAGGGTTTTTAAAAGCAAAAATATCATTTACCTTTATCTGAACAACGATTATAGTAGGTCGTACTCTA # Right flank : TTTTACAGAAATTTAGTTGTGATTAATATCTGGTTTACAATCATTTTATGCCTTGGATAAACCAAGGTAATCTTCTTCCTATGAATTATCTCATCATCATTTAAAATTATCTAAATCGATAATAGTCCTATCTCGCATTGATATTCTGTAAAGAAGTTTAATTAAAGCTATATGTTATGATATAAAAAAGTCGGATCGAATCGGATCAATGATCCTTAAAAAAGATCCAAGTTAGATCGTTTTGATTTTTACCCATTACTGATAAATTTTTTAAAAATTAAGCAATTAAAAAGTTTTTATTTTAATTTATTATTTATTTTTTATCTAAGTTATGTTATCTTTTTGTGCAAATTTAGTTCAACTTTAAAAAGGGTAATATCTCAATGAAATTAGCTTTTCGACCAACTGATAGTTGGCGTTGGTATTTTGATAGTGATTATGATAGCTTGATGCTTGAAGTATCGCCCGAAATGCTATTTCGTTCATGTTATCCTAGTAAA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGTAGTTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGTAGTTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-1.00,-6.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //