Array 1 22105-17145 **** Predicted by CRISPRDetect 2.4 *** >NZ_AOJK01000067.1 Halorubrum californiensis DSM 19288 contig_67, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 22104 30 100.0 36 .............................. GGGCGAAGAAATGGAGTCGATTATGAACCTGATCGA 22038 30 100.0 39 .............................. GGTCACTTGCGTAATCGGCTCGGCGTCCGCGTCGGACGC 21969 30 100.0 35 .............................. TGTGAGGCTACCCGTTATCGACAGGTCGCCCGTTG 21904 30 100.0 38 .............................. GACTTTGAGGCCGAGTGGGACGTGCGCCTGTTAGAACG 21836 30 83.3 0 .......................NG.TTT. - Deletion [21807] 21806 25 83.3 38 -----......................... GACTTTGAGGCCGAGTGGGACGTGCGCCTGTTAGAACG 21743 30 100.0 34 .............................. GGATCGTGGATACCCATCGAGTCAACCATATCGC 21679 30 100.0 34 .............................. AGCCGTCCCGCGATGGACGAAGTCGAGCAGGACA 21615 30 100.0 36 .............................. CAGAGATGTGTTACTCGGGCCGCCGTCGTAGTCGTA 21549 30 100.0 34 .............................. GTATTCAGGCAGCGAACCAGCCTGTACAGCGTCA 21485 30 100.0 37 .............................. GACCCGACTTCAAGGTCGTCGTGGCGTCGTCCCATTT 21418 30 100.0 37 .............................. TCGATGGTGACTCGGAGGCCGTGGTCGGCTTCGGTGA 21351 30 100.0 35 .............................. TCGGAGAACTCAAACTCGTCAGCGTCGGGATCGGA 21286 30 100.0 38 .............................. CGCTCGGAGATGCAGGGCGTCGTTACCGTGGAGGACTC 21218 30 100.0 37 .............................. GGCAAATTGTCGAGCGTGATCGCACAGACCGGCGTCT 21151 30 100.0 36 .............................. TGATGTCGATGGATCCGCCGCCGGGCTGTGCGTATT 21085 30 100.0 37 .............................. CACTTTTGCCGTGGGGTTGGCGCGGCTTCTTACTCCC 21018 30 100.0 36 .............................. GTCTCGTCGCCGGCCTTACGATACCTGTGACAACAC 20952 30 100.0 36 .............................. CGCGTCGTCGACCGCGTCGAGCGCGAGACTGCCGAG 20886 30 100.0 35 .............................. CGAGCAGCAGAGGACAACACGGGCAACAGCGTCAC 20821 30 100.0 38 .............................. GTAGTGCGCCCAGAGGCGGGTGCCGCCGTCCGGCGCCG 20753 30 100.0 34 .............................. CGCAAGTACTCGCCCGAAGGCGACGCCGCTGGCT 20689 30 100.0 34 .............................. GAGGGGCCGCTTGAGGTGCGCGACATCTCCAGCG 20625 30 100.0 33 .............................. GAGCAGGACGAGCTCGACGATGTCGACGTCCCC 20562 30 100.0 35 .............................. GTATTCAGGTCAGCGAACCAGCCTGTACAGCGTCA 20497 30 100.0 37 .............................. GGGCTTCCACCCGGCGTCGTGTCCGTTGAGACACCGC 20430 30 100.0 36 .............................. GACCGGCCGTGCTCTCCACGGACGTCGTCGACACGC 20364 30 100.0 35 .............................. ATCGAGGACCATCATGGCTGGGTCCGGGGATCCGA 20299 30 100.0 36 .............................. TGTGAGGCTACCCGTTATCGACAGGTCGCCCGTTGT 20233 30 100.0 36 .............................. CTGCCGGAGGTTGAGGTCGCCGGCGTTCGTGAGAGT 20167 30 100.0 36 .............................. TCCGGGAGCGCGTCGACGGCGGCCGACACATCGATA 20101 30 100.0 37 .............................. GACCGCGTGAGCATCGCCTCGACGTCGTCGGCACCTC 20034 30 100.0 36 .............................. GGAGTGATACCGGCCGAGGGCGTACCGCCCCGTGAG 19968 30 100.0 36 .............................. GGTCCGGGCGGCATTCAGGTCGGCGGAGACAGCGGC 19902 30 100.0 36 .............................. CGCGAGGTCTTCGAGGCTGTCCAGGGCGCCATGTCG 19836 30 100.0 34 .............................. GGTGAGTCGACGAGTACGGTCGGCCTTGCCGAGG 19772 30 100.0 37 .............................. CACGAGTCCGTGTTCTCGTACAGGCGTTCTACTGCTT 19705 30 100.0 36 .............................. TGCCGGTCGGGGGCTAAGACGAGACTGTGCCCGTTC 19639 30 100.0 36 .............................. CCGCGGTGCGTCATGCCGGCACCCCGCTCAGGTCGA 19573 30 100.0 38 .............................. GTCTTGAGGAACTCCTCGGTGAACTCGCCGGCGAACGG 19505 30 100.0 36 .............................. ACCGAGCGCACGAGCTACACCGCGACCCACCGCGCG 19439 30 100.0 37 .............................. GCCCTTGAGGAAGCAATCGACGAGTACGGCGCCGGCG 19372 30 100.0 35 .............................. TGTAGCGGCGCGGCCGACTCTCCTTATCTCCACCT 19307 30 100.0 34 .............................. CCCGAACCCGAGACGCCAGCTGGCAACGACGGCG 19243 30 100.0 36 .............................. ACGCGGCAGACGCACGTGAGCACGGCCGACGCCGTT 19177 30 100.0 34 .............................. CACGGCGGGTCGATCAACATCCCGACCGGAAGCG 19113 30 100.0 36 .............................. CTCAAGGGCGAACATCTGCTGCTGGACCCCGCCAGC 19047 30 100.0 37 .............................. GGCAGGTAAAGACGACGTCAGAGCCGAGCGAGGACTG 18980 30 100.0 35 .............................. GCCCCGGCGACCGCCTCGAACTCGATCTGTGCGGC 18915 30 100.0 36 .............................. CACCCGTGTCAGCGAGGTGGGCCGCGTCGTGGTACG 18849 30 100.0 35 .............................. CCGATGGAAGGGATTACCCACTCCACCTACTCGTG 18784 30 80.0 0 ......................NCG.TTT. - Deletion [18755] 18754 25 83.3 35 -----......................... CCGATGGAAGGGATTACCCACTCCACCTACTCGTG 18694 30 100.0 36 .............................. TCGTGGCCGGAGTTGCCAGACCTCTCCCCGCCTCCC 18628 30 100.0 36 .............................. GGCGCAACACCACTGGATGACACGGATAAATAACTG 18562 30 100.0 36 .............................. TCGACCGACTCCAGGTCCTCGGCGGTGACGTGGCCC 18496 30 100.0 36 .............................. GATGTCCGACGTCCCCATCTCTTGGTAGATCGCGTA 18430 30 100.0 36 .............................. GCGGACAGCCTCCTCGAGGCCGACGAGCTTCCGGAG 18364 30 100.0 36 .............................. AGGTCGCGGTACTCATTCCGCACGGCTTCGAGGTGG 18298 30 100.0 37 .............................. CGACCTCCAGCCGACGTCCTACGGGTGGGCGGACCTC 18231 30 100.0 37 .............................. AGATCACGAGTTCAGTCAGTCGTGGACTGAATACGAA 18164 30 100.0 37 .............................. TTCGAGGTCGTCGTACAACTCCCGCGGGAGCCACACG 18097 30 100.0 38 .............................. TCCGGACGGTAGTCGATACCGAGAGTGGGTAGCCGACA 18029 30 100.0 36 .............................. CCCGACGCGGCGTCCGACCGGGAGTGCGAGCAGCTC 17963 30 100.0 36 .............................. GAAGCGCCACTCGTAGTCGATCTGGTACTCCGTGTC 17897 30 100.0 35 .............................. GGCGAAGGGCCGACGCGGCCACGTCGGCCGCGCTT 17832 30 100.0 35 .............................. GGCGTCACGTCGCGGCCGGTCACGAAGTCCGCTGC 17767 30 100.0 37 .............................. GGCGAGCCACCAGCCGAGCGTGTCGGCGTCGATCGTC 17700 30 100.0 36 .............................. TACACCCATGGACGACGACACAGTCCTGAGCAACGC 17634 30 100.0 37 .............................. TGAGCCGGTGGGAGGGAGACGACGGATTTGTAAGTCG 17567 30 100.0 34 .............................. AATGAGTTCTGGGCGAATCTCGCGCGCGAACGTG 17503 30 100.0 37 .............................. GGTTCAAACCTGCTAAGTCCGGTCGCCTTGCCGAGCC 17436 30 100.0 36 .............................. AACCAGAAAGACGAACGGCAGCACGAAATTGAAAAG 17370 30 100.0 36 .............................. GTATCGACACGGCGGGTTGGGCGGCGACCGCGACGC 17304 30 100.0 35 .............................. ACCGTCAGTTGTAGAGAATCGACACCCGTACCAGA 17239 30 100.0 35 .............................. GGATCGAGGACCCGCCGGTCAAAAACTGGGACGAG 17174 30 96.7 0 ............................C. | ========== ====== ====== ====== ============================== ======================================= ================== 77 30 99.0 35 GTTTCAGACGTACCCTCGTGGGGTTGAAGC # Left flank : ACACTTGAGCGTACAGTCGAGCATCCGACGCTGAACCGGAAGGTGAGCTATCAGTATCTGCTTCGTTTGGAGGCGTACAAGCTCAAGAAGCACCTGTTAACCGGCGAATCGTACGATTCGTTCAAGCGGTGGTGGTAGATGTACGTCATCGTCGTCTACGACATGGAGGCCGATAGGACTCACCTAATGCTCAAACTCTGTCGTCGATATCTTGTTCACGTCCAAAATTCAGTGCTTGAAGGGGAGATCTCGGAAGGTGATCTAGCGACATTGAAGGGGGAAATTGAAGATCTCCTACAGGAAGGGGAATCAGTAATGATCTACGAACTCTCCTCGGATCGGTTGTTGAACCGTACTGTATATGGGAACGACCCGACCGAAGATAGCCGCTTTCTCTAACTGATGTCAACCCCCCGGTGGTTTGAGGGGGATTGCAGGTCGACGGAAATAGTGAAGTGAATCCCGGAAGTTGAGGGTGTATGGTGGGCAAAATCACCATG # Right flank : GAGCAAGCTGTCGAGCTCTTCCCCATGTTCGATCCTGTCTCAGAAGAACCCTACATATCGAGATAGGGGCCGCAACCCCGAAACGTGGGACTACGAATGTTGGCCAACTGGAATGGGGTCCTGACATAGTATCGGTAGCTCTGTGAAGTTATTCTGACGTTCAATATCAGAAACATAGAATCGCTGTGTGAACATGTTCAATTGTGACTCAACGCCTATTCAATAGAACGGAACAACCAATCATCAGCCTCCACTCGGTGAGACCTCAAGTCCCTCAGTAGCTATATCTTCAACAGTAGCCTTCCATCCGCCGACAGAGACTTCTTTCCCGTCAATATCGACAAGCAACGCCGCCTTGACAGGGATAGAAACCTTGTAATCAGTATCGGCTGGTCCTTGTAGTTCATAATCAACAACAGTCCCCGTCCAAGCCCCACTCATTCTCGAACCAGTTTCATAGCCGACAATACGGACGTTCAAAGGCTCATTGTTATCAAAAT # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:-0.06, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGACGTACCCTCGTGGGGTTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTTCAGACGAACCCTTGTGGGGTTGAAGC with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-4.60,-5.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [48.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //