Array 1 63783-64968 **** Predicted by CRISPRDetect 2.4 *** >NZ_LUCJ01000011.1 Komagataeibacter hansenii strain NQ5 contig013, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 63783 29 100.0 32 ............................. TGTTTCCTGCTCTTCCACATCCGCCGGGTCTT 63844 29 100.0 32 ............................. CCCTACGTGCAGAACTGGCTGCGGACGCGGCA 63905 29 100.0 32 ............................. GCTCTTTGCAGACCCGCAAATGGACGGACCAG 63966 29 100.0 32 ............................. ATCCTGTGGCCCATCCTCAACAAGTTGGATCA 64027 29 100.0 32 ............................. GCGATTTCCTCTTTGGCTTGAAGTTCGACTTT 64088 29 100.0 32 ............................. GCGTGGGCCAACATCTCCGATACATCAATCGC 64149 29 100.0 32 ............................. TGGGCACAGTCTACGCGCGGGACAACCTCGAC 64210 29 100.0 32 ............................. CCCCTGAACCATTCCGTCACTTCATCCACGCT 64271 29 100.0 32 ............................. ATCCTGCTCACAACCCACCAGCGCGTGCGGAT 64332 29 100.0 32 ............................. AAACGCAATAGAACCATTTTTTGTGATGCGAA 64393 29 100.0 32 ............................. GTAAAGGCGGCGAGTGGCTTCTATGACATTCT 64454 29 100.0 32 ............................. TGCCACCAACACTGAACATGGTGCTGTCGCCG 64515 29 100.0 32 ............................. CAGCGTGTCGATGCGCTGTCCTGCGCTGTTGA 64576 29 100.0 32 ............................. GGCATATTTCGACATACCTGTGATGGTCTCAT 64637 29 100.0 32 ............................. GCCATGCTCCAGAGGTTTTTTGCCTCCTGAAG 64698 29 100.0 32 ............................. TCTGGCCTGACTGCCTTTGCGACCGCCGCCGG 64759 29 100.0 32 ............................. GTGTCCGAGATCGTGCGCCAGCTTGCCGGTCG 64820 29 100.0 32 ............................. GCGTGGTGTCGGGTATCTGGACTATCGATTCC 64881 29 96.6 32 ............................A CATACATTACATGTGCGCACACACATGCACAC 64942 27 89.7 0 ........................--T.. | ========== ====== ====== ====== ============================= ================================ ================== 20 29 99.3 32 GTGTTCCCCGCACACGCGGGGATGAACCG # Left flank : TATGCTGCAGATCATAGGGTTGCGTTTTGCCCCTTGGGCGAACTCCCCCAATCAGAGGTTTCCAGATCGCACATGTCTCGTCCGCAAAAGCATCTATTCTGTTCACTCCCCTTCCAATCAAATAAAATAGAAATAATTTAAATATATAACATGTCATAATAAATGATATTTTATTATATATTATGAAATTTATTGTATTTATTAAAATAATTACTATGTTAATATTGTATTAATATGCATTATTTTAATTTTAATATTTATGGATAGGATTCTGTTGTTGGGGGCTTGGCTCGCCATGTTTTTATGGAGTGTGCAGACTATCATTCAATGGCTTTGAGGCAGCATCACCAATGACCGCTTGTTTTCTCAGAATATGACCGTTTGAACCGCGGCCTTGTAGCTTTCGCAGAGGAAGAAAAAAAGCTAATAATTTAGGGTGTTTCACACGGTGGAATTTTGACAATAAAATAAATATTTAAAATCAATGGGTTCCAGGAAGA # Right flank : GGCAGATGATATTGTAAATAGATATTTGATGCGTTGGTTGAAAGGCTGTTCTGCTTTTTTCTAAACTTACAAATCCAAGTATGTTGGGTATGGTTTTTTTGCAAAACCTGTCGAGTGCATAAAAAGGCGGTGTCATGCTGGATGCAGGCGACGATATGCTGAAGTTTTTTTGGGGTAAGGCTCAATCAGGCGATGGAAAAAAGCCGGGAGAGCCTGATTATCATCCGCTTGTCGCCCACATGCTGGATGTCGCCGCCGTAGCTGTTCTCTTGCCGGGGAACGTGCATACGGGGCTGGATCGTCGGCAGCTTGGTTTACTGGTGGCGTTACATGATATTGGTAAAATAATGCCTGCGTTTCAGGCAAAGGTGCCGGCGTGTTGGCCGCACCAGGCACTCGGCCCGTATGCTGATGCGGTAACGCTCTCGCGCCATGATGTCGATGGTCTGCTGCTTCTTGATTATGTCTGCGAAGATGTGCTGGCGCCGCTCTTTGGTGTG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCACACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCACACGCGGGGATGAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 74323-75266 **** Predicted by CRISPRDetect 2.4 *** >NZ_LUCJ01000011.1 Komagataeibacter hansenii strain NQ5 contig013, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 74323 29 100.0 32 ............................. AGAACCGGCTCCCGCTGCATCTTCCGGGGCAT 74384 29 100.0 32 ............................. GCGCTGGCTCCTTCTTTCGCCCGTCCCGCAAC 74445 29 100.0 32 ............................. ACGGACGAAAATTGTCACAAGCACATTCGGGC 74506 29 100.0 32 ............................. CACTGCCACTGATGCGCTTATTCGATCGGGCG 74567 29 100.0 32 ............................. GCGGCGTGGCTACGCTTGACGCCAGTGGGAAT 74628 29 100.0 32 ............................. GCCCTGACGTTCCACGGTCCGACCGGCAGCAC 74689 29 100.0 32 ............................. TAAAGAACATCAATTCCGATTTTATCGAAAGC 74750 29 100.0 32 ............................. GCGGCGGCTGCTGCCACCGCTGCCTTGAACTC 74811 29 100.0 32 ............................. CAGGAACTGGCCGGCGCTGCGCTTCAGGAGGC 74872 29 100.0 32 ............................. ATACACAGCAAACGCTGATCCATCCAAATCCG 74933 29 100.0 32 ............................. ACGATTGAATCCTTTTTTATACACTTGAGTAA 74994 29 100.0 32 ............................. GGTTTAACAGTTTGTGATGTGACATAGCTGGT 75055 29 100.0 32 ............................. GCGTCCCGTCCTCAACATCTGCGGATAATCCA 75116 29 100.0 32 ............................. GGAGCCAAGTCAAGCTGTATTGGGGAATGTTG 75177 29 100.0 32 ............................. GGCAGCGGGTCCGGCACGTCGCTGGTGCGTTA 75238 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 16 29 100.0 32 GTGTTCCCCGCATACGCGGGGATGAACCG # Left flank : ATGTGCTGGCTGCGGGCGGGATGGAGGTTCCGTCAGCACAGGAAGAAGCCATGCCAATTGCGTTCATGGATCGTAAAGGGCTGGGTGATGCTGGTCATCGTGGTTGAAAATGCCCCGCCACGTCTGCGTGGGCGTCTGGCTGTATGGCTGCTGGAGGTACGTGCAGGTGTCTATATCGGCAGTTACGGGCGACGCGTGCGTGAAATGATATGGGGACAGGTATGTGCCTATATAGATACGGGAAATGCCGTGATCGCTTGGGCCACGCCCAATGATGCTGGTTTCGAATTCGACACCTGTGGGAAAAACCGTCGTATCCCGGTCGATCTGGATGGACTGCGTCTGGTGTCTTTTGGCCCAGAAGCCGCGTTGCCGGCGCATCCCGGCCCGACTGTCAGGTCACTTTCATCCCGATCTGGAAAGGGATAAATACAGAGGTTAAAGTTGGTAGATTCTTTGACAACAAAATAACCGTTTAAAATCAAATGGTTCCACGAAGA # Right flank : GTCGAACACGAGATCCCCCAACCCGACCTCGCGGTGTTCCCCGCATGCCCTGTGCCATCGCCTGTGTTTGCGCAGCATGGCAGGAGGCTGATGTTTTCCGACTCTGCGATCATCGGATGTTACAAAAAAACTGTTTCATGAGTCGCGCGGCGAAAGTCCTGCCCTTCGTGGGGGTATTCACACGCTCTGGATAAAATTTCTCCGTGCATGACACCATATCTGGTGTCATGATTACCTTCTTTCCACTAAATGCGCGAACCGGTGTCCTCGCATGGCCCTCGTTCGCCTGCACGAGGGAGCCAGTGCATGGACGGAGGTTTTTCGCTGTTTGGCGGCGCGCGTGCGCAGATACGTGATCCCTTCGAAGGGGCATTCGGCCTATCCCCGCTGCCTGCCCGTTCGCTGGATCGTGGGATGGGGGCGGCTGTGGGGCGGCGGACCGTGTTCCGCCCCACCGATCACGAGGATTTCGGCCATGTGGCCGCGCGTGTGGCGCGGGG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCATACGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [5,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCATGCGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //