Array 1 1327127-1325565 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP059103.1 Flavobacterium psychrophilum strain FPS-S11A chromosome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 1327126 46 71.7 29 A.AA.T....A.ACC...CGGGT....................... TTTTGTTTTCGTCAAATTCCCCATTTGTG T [1327122] 1327050 46 100.0 30 .............................................. ATTAATGCGCTAATTATCGAAGGTAGCACT 1326974 46 100.0 30 .............................................. AGGACGATTATAAATTTATGCTAAATATTA 1326898 46 100.0 30 .............................................. AGATATATCTAATACTAGAGCGTACGACAG 1326822 46 100.0 30 .............................................. AAAAACAATATCGAAAAACTGAAAGAGAAT 1326746 46 100.0 30 .............................................. TATATCCGTGTTMAAAAACTGAAAGAGAAT 1326670 46 100.0 30 .............................................. TATATCCGTGTTTGAATACACATTGCCACC 1326594 46 100.0 29 .............................................. CGTTTTCGCACGTGAAATCAAAGTACTAT 1326519 46 100.0 30 .............................................. TTTTAAAAAATGGTTAAGTAGGAAAACTTA 1326443 46 100.0 30 .............................................. TCCAGTAAGCGAGATGTCGTATATCAAAGT 1326367 46 100.0 30 .............................................. AGCCAATGCCTTGTGTCCTGTTATGTGTTC 1326291 46 100.0 30 .............................................. AAAAGATTTAGCAACATAGATGATTGTTTT 1326215 46 100.0 29 .............................................. TTTTACTTTTTATTTAAAGCAACTGTAAT 1326140 46 100.0 30 .............................................. TAATAAGTTGCTCGTTTCCGTTTATTCCGT 1326064 46 100.0 30 .............................................. AGTAGGTAATGTATTCACAATAGACACATT 1325988 46 100.0 29 .............................................. AAAACGAAATACATACAGCGCACGCATTC 1325913 46 97.8 30 ............................C................. AGGCACTTCTTTAGACTTAAATAAGTCTTT 1325837 46 100.0 29 .............................................. AGTAATAGATGGGGGGTTTGAATGCCGTA 1325762 46 100.0 30 .............................................. TCATCATCTGATGAAAATTGCTGTTCAATA 1325686 46 100.0 30 .............................................. AAGCAAAATAAAATAAAAGAAATATTTAGC 1325610 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 21 46 98.5 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : TTTGCGTGGTACATCAAATTAGAAACGCTTGTAGATATGTGGTATGGAAAGACAAAAAACAATTTACAACCGATATGAAACTTGTTTATACAGCACCAACAAAACAAGCTGCCGCATTAGCTTTGGAAGATTTTGCTCAAAAATGGGAATCCAAATATGGTTATGCCATCAAATCCTGGAGAGAAAACTGGGACGAATTAACCGTGTTTTTCGACTTCCCGCTAGAAATTCGAAAAATAATCTATACTACAAATTTAATAGAAAATTTAAATGGAAAAATTAGAAAATACACTAAAAATAAAATGTCATTCCCTACTGATGATGCGGTTCTAAAATCAGTTTATTTAGCTTTAAAAGAAGCAACAAAAAAATGGTCAATGCCAATACAAAATTGGGGTATTGTTTTAAATCAATTTAATCTTATATTTGACAAAAGGCTCAGATTATAAAATCCAAGCCTAACTTTTTAACTTACACACTTTGCGGGATAGTGTCATCAA # Right flank : ATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATTACTCCAATTTTGCCGTGTTCGGGCAAACTATTTCTTATTCTTTTGGTATGTACTTCGGCATTTTCTCTGCTGGCACAAAATCGTATATAGATCGAAAACTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTAGGTAAGTCAAAAAAAACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCAA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: R [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-0.90,-3.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-14] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [71.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //