Array 1 116-1752 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCEB010000029.1 Flavobacterium psychrophilum strain 6739/18 contig00029, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================================== ============================== ================== 116 46 69.6 29 TAAT.T....A.ACC...CGGGT....................... TTTTGTTTTCGTCAAATTCCCCATTTGTG 191 46 100.0 30 .............................................. ATTAATGCGCTAATTATCGAAGGTAGCACT 267 46 100.0 30 .............................................. AGGACGATTATAAATTTATGCTAAATATTA 343 46 100.0 30 .............................................. AGATATATCTAATACTAGAGCGTACGACAG 419 46 100.0 30 .............................................. AAAAACAATATCGAAAAACTGAAAGAGAAT 495 46 100.0 30 .............................................. TATATCCGTGTTTGAATACACATTGCCACC 571 46 100.0 29 .............................................. CGTTTTCGCACGTGAAATCAAAGTACTAT 646 46 100.0 30 .............................................. TTTTAAAAAATGGTTAAGTAGGAAAACTTA 722 46 100.0 30 .............................................. TCCAGTAAGCGAGATGTCGTATATCAAAGT 798 46 100.0 30 .............................................. AGCCAATGCCTTGTGTCCTGTTATGTGTTC 874 46 100.0 30 .............................................. AAAAGATTTAGCAACATAGATGATTGTTTT 950 46 100.0 29 .............................................. TTTTACTTTTTATTTAAAGCAACTGTAAT 1025 46 100.0 30 .............................................. TAATAAGTTGCTCGTTTCCGTTTATTCCGT 1101 46 100.0 30 .............................................. AGTAGGTAATGTATTCACAATAGACACATT 1177 46 100.0 29 .............................................. AAAACGAAATACATACAGCGCACGCATTC 1252 46 97.8 30 ............................C................. AGGCACTTCTTTAGACTTAAATAAGTCTTT 1328 46 100.0 29 .............................................. AGTAATAGATGGGGGGTTTGAATGCCGTA 1403 46 100.0 30 .............................................. TCATCATCTGATGAAAATTGCTGTTCAATA 1479 46 100.0 30 .............................................. AAGCAAAATAAAATAAAAGAAATATTTAGC 1555 46 100.0 30 .............................................. AATCAAAATAAGGTTTTAAAAGCGGCTTGG 1631 46 100.0 30 .............................................. AGGGCTTCGATTTTCTCGGGTTTCCATTTA 1707 46 100.0 0 .............................................. | ========== ====== ====== ====== ============================================== ============================== ================== 22 46 98.5 30 GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Left flank : CAAAATTGGGGTATTGTTTTAAATCAATTTAATCTTATATTTGACAAAAGGCTCAGATTATAAAATCCAAGCCTAACTTTTTAACTTACACACTTTGCGGGATAGTGTCATCAAAT # Right flank : CATACCGCGAGTTAATCGTTTGATATGTTGGTGGTTATATGCTTATTTTGAAATTAAAAAACAGTTCTGTTTGTGTGTTGATATTCTGGTAGGTCTAATATTTCTAAATCCTATTTTTCAAAAAAGTTCTAATTGTTGCGAAGGTTTGTCTGTTTCTACAGGTTTTTTTCCATAAAAAAGCTCCATCATACCAAATTGTTTATCGGTTATTTGCATTACTCCAATTTTGCCGTGTTCGGGCAAACTATTTCTTATTCTTTTGGTATGTACTTCGGCATTTTCTCTGCTGGCACAAAATCGTATATAGATCGAAAACTGAAACATAGAAAAACCATCGTCCAATAATTTCTTGCGAAATTCACTGGCAATTTTACGCTCTTTCCGCGTTTCGGTAGGTAAGTCAAAAAAAACTAATATCCACAAACTTCTATACTGGTTTAAACGGGTGTAATGTTCGTCATACATAAATAGGGTATAAAATTTTTCTTGCGGCTCCCGCA # Questionable array : NO Score: 6.19 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.91%AT] # Reference repeat match prediction: F [matched GTTGTGAATTGCTTTCAAAATTGTATTTTAGCTTATAATTACCAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.00,-0.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [14-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0.41 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 1 4514-4347 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJCEB010000032.1 Flavobacterium psychrophilum strain 6739/18 contig00032, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 4513 29 100.0 40 ............................. CCGATGTTAAACCAAAACAGCCAAAAAAAGCAAAATTTTC 4444 29 96.6 40 ........................T.... CTGATATTAAACCAGAACAGCCTGCAAAAATACCCCTTCT 4375 29 96.6 0 ....A........................ | ========== ====== ====== ====== ============================= ======================================== ================== 3 29 97.7 40 AATAGCAGTCACAGAATTAGGAATGGTAA # Left flank : TCCTAAAAAAGGAATTAAAATGACAAATAATAATTTTTTCATGTTTTTGTTTTTAATTATTGTATAATGATTGTTTTTGTTGCTTTACCTTGGTTTGTTATTACTTCTACAAAGTAATTTCCTTTTGCAAAGCTTGAAACGTTTGTTTCTAAATGATTAGTTGTTTTTATTAACTGCCCTAATGTGTTGTAAAAATTTACTTTTTCTAATTGTAATCCCTCTTGCAAGGCTATGTTTAAAATTTCTGAAACTGGGTTTGGGTATATTTTTAAAGCGCTTTCTATTGCAAATGAATGATTAGAAAGTAAACTACCAGAAATAGGGCTAAAATTCCTCCAAACCGCGGCTGCCTGATAAACGGCTTGCGTACCAGTAGGAACATTTAAAGCACAGTTTGATTGAGTAACATTACCGAAGACATTTGCATTAATAACTAAAGGGCTTGTAATATGACAATTTACTGTTCTTAAACTGCTACAGTCTGCAAAAGCACGCTCTTC # Right flank : TCGATGTTAGACCAGAACATTTTTCAAAAGCAGCATCTCCGATAGATGTAACGGTATTGTTAGGGATTGTAATTGATGTTAAATTAGAACAAAGCGCAAAAGCATCCTTTTCGATAGATCTAACAGAATTCCCAACGTTAACCGACGTTAAACCTTGACAGGTAAAAAACGCAGATTCTCCAATAGCAGTCACAATATAGTTTTTTGAATTATAAGTTACTATTTCTGGTATTTCTGCTGCTCCAGTAAAATTAGCGTTTCTAGCTACCTTAACAGTAAAAGGAGCTGTTGAAGAAGTAATGGTATATCTTATATGGTTTGCTGTAAAATCTTGTGCTATTCCTAAAAAAGGAATTAAAATAAAAAATAATAATTTTTTCATGTTTTTTGTTTTTAATTATTGTATAATAATTGTTTTTGTTGCCTTACCTTGGTTTGTGATTACTTCTACAAAGTAATTTCCTTTTGCAAAGCTTGAAACGTTTATTTCTGAATGATTA # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATAGCAGTCACAGAATTAGGAATGGTAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:65.52%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //