Array 1 755579-757196 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP054507.1 Flavobacterium columnare strain F9S17 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 755579 36 97.2 30 ......A............................. ATTTTAAAAAGACAGATTAAATCGGCTGGG T,TATAA [755580,755588] 755651 36 100.0 30 .................................... TGACTAAAAAAGCCATTGCAAGCGCTACAG 755717 36 100.0 29 .................................... CGATTTGGTTACACGAAGGTATTTTCGAG 755782 36 100.0 29 .................................... TTTTAAATTTGGCGGTTGACCATAGATCG 755847 36 100.0 29 .................................... ATTGTAAGGTATTTCAAGTGGACACCGCA 755912 36 100.0 30 .................................... ATTATATTTGTGTTACATGGTGTAGTTAAA 755978 36 100.0 30 .................................... TTCAGAAGGAATTTAGAAGCTTCTGTTCCT 756044 36 100.0 30 .................................... TATAAAGCAAAACTAATTGATTGATAAACT 756110 36 100.0 30 .................................... GAAAGCTATGCTGCCATATAAACAGGATGG 756176 36 100.0 30 .................................... TTTGAAATAATTTTTAATTTTATAACATTA 756242 36 100.0 30 .................................... TCTACAAATACCTGAATTAACTCTAAACTG 756308 36 100.0 30 .................................... AAAATAAGAAGAGATAGTAACAGAAACAAA 756374 36 100.0 30 .................................... GCATTTCAAGATAGTAGAGAATTTAATCAG 756440 36 100.0 30 .................................... AACTTGCAAACAATACCAGACTATCAAAAA 756506 36 100.0 29 .................................... CTTATTTTTCAAGTCCGTCGGGGTCGATG 756571 36 100.0 30 .................................... GATGCTGAAGAAAAACACAAAAAAGAACAA 756637 36 100.0 30 .................................... TTATAACCTTTTTACTATTTCATTTAGCTT 756703 36 100.0 30 .................................... AGAATTTCGGTTGGATACTCAAAGCAATTG 756769 36 100.0 29 .................................... GGTTATAAAATTGATGAAGAAATAGGCTA 756834 36 100.0 30 .................................... CGACCGCAAACATACGATAGTTACTTTATA 756900 36 100.0 29 .................................... GTTATTCAAGATAATTGCAACATAGGGTA 756965 36 100.0 29 .................................... TACTCATTCTCACTAAAAGAAATAGCTTA 757030 36 100.0 30 .................................... ATGTTCTATCGGCGTAAAATAAGTTAGCAG 757096 36 100.0 29 .................................... TTAATTAAATCACAAAAAATGACAAGAGA 757161 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 25 36 99.9 30 GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Left flank : AAATGCTTGCCGAATTTAAAAAACGATTAAATGTATAATTATGATTTAAGCGAACAAGCTAAAATAGATTTGTTGCGTATTTATGAATATGGAATTGGTCAGTTTGGTCTAGACCAAGCTGATAAATATTTTGACATGATGCACGATTGTTTTAATAAAATTGCTAAAAATCCATATTTATTCCCTTTGGAATCAAATATTAAGTCAAATTATTACAAATGTGTTTGCGGAATTGACACCATCTATTATAAAGTTGTTACAAATGGAGTTATCATTACAACAATAGTTGGAAGGCAGGATTTTGAAATTCAAAATTTAGTTCATTGACATACACTATCAAATCGCAAATAACCAAACCTCATACTGATTGGTTTGATTAAAGATTAGAAACCGAGGGACGAGGTTCAACGAAGTCAAAACACGATATTATTTGGTTAAAAATTACGATTGTAATTTCAGTTGTGGTTTACAAACACCAAGTCAATATTTGTTATAGGTGT # Right flank : TAGCTAACAGCTTAGTTCTTAAATATCAAAGCATTAAGCCGAAATATCGTTAAAAAAAATGCTTCTTTTTTGGCACGTTATACCAAGATTGAAGCATTTTTTTATTTCTAAAACAGTTCCAGTTGGGTGGGTTGTGGTGCTTTAGGGGTTTCTACTTTACCCCAAAAGTTTTGTATGTTCCCAAATTGCTTGTCTGTAATTCGTAACATACTTACTTTTCCTGAAGGAGGCAGGAGTTTGTGTACACGTTTTTCATGTACATCGGCACTTTCGCTACTGGCACAATGCCGTATATATACCGAGTATTGCATCATACTAAAACCATCTTTCAAAAGTTGGTTCCGAAATCCAGAAGCATTTTTTCGGTCTTTCTTAGTCTCAGTAGGCAAATCAAAAAACACAAACAACCACATAATTCGATACCCGTTTAAATCCATAATTTTGGGTATTTTATCTTTTTACGATCGCCCGAAAAACACTGTTGTAAGGAACTTGCCGTT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: F [matched GTTGTGGTTTGATTAAAGATTAGAAAACACGATATT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [73.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], // Array 2 1284453-1285537 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP054507.1 Flavobacterium columnare strain F9S17 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 1284453 36 100.0 30 .................................... TATTCTAATGGATCAATTAAAAAAGCAAGA 1284519 36 100.0 30 .................................... TCGAGAGGTGTTAATGAAACGAACATAGTT 1284585 36 100.0 29 .................................... AATTACTGCTAAATGATACAATGTGTTTG 1284650 36 100.0 30 .................................... GGTAAATAATTTATCTCTAGATTATAGTAT 1284716 36 100.0 30 .................................... GCTATGCTACTTATACAGATGCACAACATC 1284782 36 100.0 30 .................................... TGGTTTTCCGTAATGATATAAATAGAATTT 1284848 36 100.0 29 .................................... CGGTTTGTCTGCATTTGAAACTCCAGCAC 1284913 36 100.0 29 .................................... TCGCGGGAAAAGTTGAAAAAGGATTAAAC 1284978 36 100.0 29 .................................... GTTTTAACCAAACATTTGCCAGGGCATAA 1285043 36 100.0 30 .................................... AGTGCGGAAAGCCCGGCTTTAGAACGCCCA 1285109 36 100.0 30 .................................... GGAGACATCCATCCTCTATCTAAACGTAAA 1285175 36 100.0 30 .................................... AATGAAGAAGTTTATTTAGAAAACCAAAGA 1285241 36 100.0 29 .................................... CAATCTCAAAGTATAATTGATAAATAGGC 1285306 36 100.0 29 .................................... TTCTAGCTTTGGCCACCTCATCTTTTGAA 1285371 36 100.0 29 .................................... TTGTCGAACTTTTCTTTTTTATAATGCAA 1285436 36 100.0 30 .................................... CATATTCTTCTTCAAAGTGATGTTTGTAAT 1285502 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 17 36 100.0 30 GTTGGGAAAGCCCTTATTTTGAAGGGTATCTACAAC # Left flank : GAGTACGCAAATACATCCAGCCGATTTTGAAAGAGAGGGCAATCCAAATTTTAAAAAATATTTAGCCCATTCTATTTTAGAAAACGAAGATGATCTTGATAAACTGCCTGAAAAAGCAGAAGCAATGAGGGAACTGGATGAAACAATTACTAATCCAATCATTAAAAAAGCGATTGTGTTAATTATCATTCGCAACAAAATGGCGCACAATCAATATCCACCTAAATTTATTTACGATTTAGCGAATCGTTTTGTCCCAAAAAAAGAAGAAGAATACTTTGCGACCTATTTCAACCGAGTTTTTGAAACCATAACAAAAGAATTATGGGAAAACAAAGAGAAAAAAGATAAAACACAGGTCTAAATACAATTGCTCTTTGACATTTTAAATTAGGATTAAAAAAATGACTACATTTGCAGTGATTAAAACAAAAAAAGTTCATTTTTTATAAAGAAAAATTGTAGTAATCCCTTACTATGAGAGGCTTACCAGCGTTTAG # Right flank : CACCCTTAGAATCTTCACCGTACCAATACCTGTTAGCCCTTATTTTGAAGGAGGGACGAGCGTTAAAAAATAGTCCAATGGACTATTTTAGCGAAGTAGCCAGGAGGTGCGTGGGCGTTTAAAACCGAATTCAATTTTTTTGAAGGAGGGACGAGCGTTAAGGAAGCTGTCCAAAAAGTACTAATTCAACATCCAGTTTGTCACTCCTACGTAAGGAGGAGTCTCATAATCAATAGTATGTAATTTCTTCCTTTGGTCAAAATCACAAGATTGCGAACTTTTTGGACAGTCTCTAGCAAAATAGCGAGCAGGCGTTTGAAACCAAATTCAATTATTTAAAAAATAGATAAACCATAATTCTTATTCATAGAAATACCTCTTTTTTTAAAATAACAAAAACAAACCTATAACACAATCAAGTAAATATGATCTGTATACTACCTCCTAAACTTCCTTATAATTTAACCTCAACACCTAAGATATTTTTGTAAATTTGAATC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGGGAAAGCCCTTATTTTGAAGGGTATCTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.70,-5.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [68.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.64,0 Confidence: HIGH] # Array family : NA //