Array 1 33543-30042 **** Predicted by CRISPRDetect 2.4 *** >NZ_QMFS01000007.1 Klebsiella pneumoniae strain CVUAS 30301 NODE_7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 33542 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 33483 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 33422 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 33361 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 33300 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 33239 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 33178 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 33117 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 33056 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 32995 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 32934 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 32873 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 32812 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 32751 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 32690 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 32629 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 32568 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 32507 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 32446 29 100.0 32 ............................. GACCTGTCATGACGGAAATAGCGGTTATAAAC 32385 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 32324 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 32263 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 32202 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 32141 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 32080 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 32019 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 31958 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 31897 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 31836 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 31775 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 31714 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 31653 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 31592 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 31531 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 31470 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 31409 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 31348 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 31287 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 31226 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 31165 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 31104 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 31043 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 30982 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 30921 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 30860 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 30799 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 30738 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 30677 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 30616 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 30555 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 30494 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 30433 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 30372 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 30311 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 30250 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 30189 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 30128 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 30070 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 58 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //