Array 1 79963-83707 **** Predicted by CRISPRDetect 2.4 *** >NZ_UIVW01000007.1 Klebsiella pneumoniae strain EuSCAPE_PT050, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 79963 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 80022 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 80083 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 80144 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 80205 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 80266 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 80327 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 80388 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 80449 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 80510 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 80571 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 80632 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 80693 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 80754 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 80815 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 80876 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 80937 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 80998 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 81059 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 81120 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 81181 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 81242 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 81303 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 81364 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 81425 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 81486 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 81547 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 81608 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 81669 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 81730 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 81791 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 81852 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 81913 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 81974 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 82035 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 82096 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 82157 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 82218 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 82279 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 82340 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 82401 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 82462 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 82523 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 82584 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 82645 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 82706 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 82767 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 82828 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 82889 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 82950 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 83011 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 83072 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 83133 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 83194 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 83255 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 83316 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 83377 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 83438 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 83499 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 83560 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 83621 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 83679 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 62 29 99.2 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //