Array 1 36-12486 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIMA01000124.1 Paenibacillus koleovorans NBRC 103111 PKO02S_CON000124, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ======================================================== ================== 36 31 100.0 39 ............................... GTCTATGATAACGTTTTTGCAGATGGACGGTCAAACATG 106 31 100.0 35 ............................... TGCTTATATTTCTAGGTTCGATTTATGTTTTTAAG 172 31 100.0 36 ............................... CGGAAAAAATTCCGGTGAAGGAAATTCTACCTCAAG 239 31 100.0 36 ............................... ACCATTACTAAAGTAGAAACGGCGGCTGTTGTTTCG 306 31 100.0 36 ............................... TCTATCAGCTCGCTCTGGTTGCTTGGAAGATTATCG 373 31 100.0 35 ............................... TTTTTGTGCTATATTTTACTCGTACCACCACTATG 439 31 100.0 37 ............................... TACAATTCCTGTAGTCCCATCTATTGCAGATAAGTTG 507 31 100.0 37 ............................... TTGACGCAATTGTTGGATTGGATAAGTCGGGTTCCAG 575 31 100.0 34 ............................... ATTTTCTTCATAAGTGCATCCAGCCTAGACTCCG 640 31 100.0 34 ............................... ATCATGGCTGCTGGTACGTTCGAAGGGTACATCG 705 31 100.0 36 ............................... ACAATAGTGCCGACAAAGTCGATAACCCCACTATAG 772 31 100.0 35 ............................... AAATTCTCAGGCGACCAAGCCTTCGAAGTGTTTTG 838 31 100.0 35 ............................... TCGTCTTACGAATGACGGTATCGGCACGTACCAGG 904 31 100.0 35 ............................... ATTACTGACAATCCGATTAATCCGTCCACGATCAG 970 31 100.0 35 ............................... GTATCGAGCTTTCTGTTTTCGGCGCATCCTTCAGG 1036 31 100.0 36 ............................... CATTATAAAAGCTCACAAGCAAGGCATTTGTTACCG 1103 31 100.0 36 ............................... TAAAAGCAGCTAAGCCTCTGGATTACTACGATGACG 1170 31 100.0 37 ............................... TCATTACCTCCCTGCCCCTGTGGGCTGATCTCTTGAG 1238 31 96.8 35 .T............................. GTATTCCTCGGGATGCCGGCGGATGTTCTTGACCG 1304 31 100.0 35 ............................... ATGCAGTCTGAGACCCTGCAGCGGAAAGGTGGGGG 1370 31 100.0 37 ............................... ATCAGCTCTTGGCCGTAGAAGGAAGGGATGTCGGGCG 1438 31 100.0 35 ............................... AAAATCCCGCGAACAAATGCTGAAGATTTAATTGG 1504 31 100.0 36 ............................... AGTCTGAATTTCTACAAACCACTCGGTAACGTACTG 1571 31 100.0 35 ............................... AGTCAACAGCACGAGATTGTGACCTGGACGGCAGG 1637 31 100.0 36 ............................... GCTCCGACAATGCGGAGTTGCTCGAGGAACCGCGAG 1704 31 100.0 35 ............................... TTCTCGCGTTCCTCCTCCAAATCCTGAATGCGTGG 1770 31 100.0 34 ............................... TGTCCTTCAAACAATCCGTTAGCCGGATCCGACG 1835 31 100.0 36 ............................... AAACTGCGGCCGCTTAGTCAGGATGTACTCGTCCAG 1902 31 100.0 35 ............................... TCTTCTTGCTTCAAGAGCGCTTCGGTCACGTCAAG 1968 31 100.0 35 ............................... TGGATCGATTACCACAACGATCCGCGTAAACGTCG 2034 31 100.0 36 ............................... ACCCCACGACGCCCGCTGCTCGCGATCAGTTGCAGG 2101 31 100.0 34 ............................... GACTATCAGCCGAGCAGCTGGTCGGTGCTGGAAG 2166 31 100.0 34 ............................... CCTTGAGACGAAGGTCAATAAGGCCAAGGCGAGG 2231 31 100.0 35 ............................... AGTCCGACGTTTAGTTCGTTCGGAAAAAACGCCTG 2297 31 100.0 37 ............................... GTCAGGATCTGGAGGCTCGCAATCGGCGGGCAACCAG 2365 31 100.0 37 ............................... AGCATGTAATTGCTGAGATCCTCGAGACCATTTTCGT 2432 29 93.5 35 --............................. TGAGATCAGTTGGACGCTGTCGTTATGTGCAGGAG 2496 31 100.0 39 ............................... AAGAATGGGTGAAGGGACTATACGAAAAGGGGTAACAGG 2566 31 100.0 35 ............................... TTCCCGGACACGATGTCGATCCGGTCAATCAGAGG 2632 31 100.0 34 ............................... TGAAAATATCTTTTACACGCCGTCAACTCTTCGG 2697 31 100.0 37 ............................... GTTTGCGTAGGGCTGGTTGTGGTCGTGGTTCGCGCCG 2765 31 100.0 35 ............................... ATCCCTCTGCCCCTGTTGTATGGCCTGTTCTGCCG 2831 31 100.0 35 ............................... ATAAGCTCTTGGCCGTAGAAGGAAGGGATATCAGG 2897 31 100.0 37 ............................... GGCTTAGCCGGCTTCGTTGGCAGTGTCCTCATGCTGG 2965 31 100.0 36 ............................... AATCATACGTTGAAAGCGCCACATGGGACGGTGTGG 3032 31 100.0 35 ............................... CTTTTTCTGGGTTGTAGTAAATCAGCCCGACTTCG 3098 31 100.0 36 ............................... TGTCCGAAGCCGAAGTAGGTAGACCGTCTGCAAATG 3165 31 100.0 35 ............................... TTAAATGCGTTGGTCGATTCGATCATCGCTATATG 3231 31 100.0 35 ............................... CATCAACCACTATTGCGGGTTTTTCGAGAACCTGG 3297 31 100.0 34 ............................... TGCAAAATGACACGTTCCTGCCCGGGGTGATAAG 3362 31 100.0 34 ............................... TTCCTTCGACCTCCGGGAACTCCTCCCAGTTACG 3427 31 100.0 34 ............................... TTGTCCTTCCGGAAGTTGTACTCCGGGTGCCAAG 3492 31 100.0 35 ............................... TCGATGAAAGTGTAATCGGCAAGTACTGGCCGATG 3558 31 100.0 35 ............................... AAAATTGGATTTTCTGGTTTAGTTTCTGGTTTGGG 3624 31 100.0 34 ............................... ATCTCCTTAATATTGTATATGAATTATTTTTGCG 3689 31 100.0 35 ............................... GCCTACGGGGAGGTAACGGCGCATCTCCTTCAGCG 3755 31 100.0 36 ............................... CGCTTACAAACGTTGCGGGAATAGCTGTATCGGACG 3822 31 100.0 37 ............................... TTAAAATGATGGGGTACGTAAATGCTGCGAACGCTTG 3890 31 100.0 37 ............................... TCTTCTCCGGCTTTTCGAGCGGCTGCAGCTGCCTCCG 3958 31 100.0 35 ............................... TTCAGGCTCAGGAAGCAGGTCAGACAGCTGTTTGG 4024 31 100.0 35 ............................... CTTCCCGGCGAGTTGGGCATAAGCGGTGGCAGTAG 4090 31 100.0 36 ............................... ATCAGATTTTCGTACATTTCGCGGTCGGACTGCCGG 4157 31 100.0 37 ............................... GTTCCTCGAGGTTGGTACCATGCATAGGGTCATCCAG 4225 31 100.0 35 ............................... GGCTTATGCTGAGAGCGCAGTCCAAGGGCGACTCG 4291 31 100.0 36 ............................... TTGCTTAGTCATTGTGGTTGACATAGATGCCTCCTG 4358 31 100.0 35 ............................... CCTAATTCGTTCGACAAGCGATTTCAGTCTCTGGG 4424 31 100.0 36 ............................... AGAGATAGCCTAGCGATCTACAGCCCCCTTTATTGG 4491 31 100.0 34 ............................... CATGTCACCAGCTGCATACGCAGCATAGGACAGG 4556 31 100.0 34 ............................... CGACTACGCAGGATGTCGATATATTGCCTAAGCG 4621 31 100.0 35 ............................... GCAAACAAGAAGTCTGTGCGACAAACTGAATTTTG 4687 31 96.8 34 ..........................A.... AAGCAGTGGGGCGAGTGGGGGCCGGAATATAACG 4752 31 100.0 35 ............................... ATCCCCCGCCGGACGAAGCCGAGCTGCTTGAATAG 4818 31 100.0 35 ............................... CTTCCGCTTGGAGAAAAAAAGATGATTTCGCGTCG 4884 31 100.0 37 ............................... GTTATGGGGGAAAGGACGCCGGGTTAACACGAGGAAG 4952 31 100.0 35 ............................... TTGTGCAATGATGGTTAGCTTTTTGGATACATTGG 5018 31 100.0 35 ............................... ATCGTGTGGCTAGGTAAGGAGGTCCTTGTCCCACG 5084 31 100.0 37 ............................... ATAATACTTAAGTCAATACAAAGTATTAGTTAGTTGG 5152 31 100.0 37 ............................... ATGCGTGTGACGCTGGAGGGGTACGAGGAAGACCTTG 5220 31 100.0 35 ............................... CCTCCCTCCCCTGCATATTAGGGGCTAGTTGTGGG 5286 31 100.0 38 ............................... ATTTCATTCGCCGGGCGTTCTGCTCGGCAGTATGCACG 5355 31 100.0 36 ............................... TATGTAGGTTCCGGCGGCGATCGCATCGACCACTTG 5422 31 100.0 35 ............................... GAATTAGGCTGAATGAACGTAACAATCTTTCCGCG 5488 31 100.0 35 ............................... AACGACGAACCGATCACAGAGACGCTACCGGCGTG 5554 31 100.0 35 ............................... TCCTGTCTCGCAGGGCACCACATTTACGGCGTCCG 5620 31 100.0 36 ............................... ATTTACCCGTTTTCTCCTGTCTCGCAGGGCACCACG 5687 31 100.0 36 ............................... CAACTGGTCGGCATCCAGCGCCGCCAGTTCGGTCTG 5754 31 100.0 34 ............................... GTTAAACGACGCAACCACGCGACGAAAGCCTGAG 5819 31 100.0 34 ............................... ATCGGACACGTTGACTTGCTGTCCGGTAGCCGTG 5884 31 100.0 34 ............................... TCCGATTTTTGTATCTGGTTCTATTCCCAGTACG 5949 31 100.0 36 ............................... AATTCGTGCTTCTCAATGTAACGTGGGAGTTTTTTG 6016 31 100.0 36 ............................... GTTTCTTGGCTGACCTACCTATCTCCCTCAATGACG 6083 31 100.0 34 ............................... CAGCCATCGCCGCACACGTGACCGCCGAAGCTAG 6148 31 100.0 35 ............................... TACGCTTGGACTTACGCATATCCCACTTATCAAAG 6214 31 100.0 36 ............................... CGGATCCGCTGTCGCACCGTACGCAGCACTAAGCCG 6281 31 100.0 35 ............................... AATATGGCCCCTGTTGAGGGCGGGGATGAACTGAG 6347 31 100.0 36 ............................... GGGGTAGTCAAGGTCCAGTCACGCTAAAACCGAATG 6414 31 100.0 36 ............................... TCACTACCGCTTCGGCCTCCCGTACAGCCAATCTTG 6481 31 100.0 38 ............................... GTTTGAGTGGGGCTTGATGTCGTTGTTGTCCTCGGCGG 6550 31 100.0 36 ............................... TGTCCAATCCGTACCCACAGCAAAACTTGCGCCATG 6617 31 100.0 35 ............................... CAGTCAGCCGGGATAGGGAAAGGCTTTATCACGTG 6683 31 100.0 33 ............................... TGAGCGACCTGCTCGTCCGTCGGTGTCATCTCG 6747 31 100.0 34 ............................... CAACCTGGTACGCGGTTGCCTGCCTTTGCCTGAG 6812 31 100.0 35 ............................... ATCCCAATATCCCAGTTGAACCAAGTACCACAAAG 6878 31 100.0 36 ............................... ATCAAACATTTCGTATAGATCATCAATCAATTGCGG 6945 31 100.0 37 ............................... TCCATTTCCCCCCACGCCCAAGTCACCAAAACTAACG 7013 31 100.0 35 ............................... CTTCGGGCAACTGTCCCTCGTCCGCTGATATCCCG 7079 31 100.0 34 ............................... TTAACGACCACCTTGTTTCGATCATCGTCAAGAG 7144 31 100.0 37 ............................... AGCCATTCTCCGGCGGTTTTGGGGGCAATATTGCCCG 7212 31 100.0 36 ............................... TGATACATTTCGTATTCCTCCATTAGAGCTTCGACG 7279 31 100.0 36 ............................... TTAACGACCACCTTGTTTCGATCATCGTCAAGAGCG 7346 31 100.0 37 ............................... TGGTCGAGGTAAGGTGGTACAAGGCAACGTTTCCGCG 7414 31 100.0 35 ............................... AAGTTGAGCCATCCCTGAATGCGTTCGTTGGACGG 7480 31 100.0 36 ............................... ACGTCATCGAGCCGTTCGTCATCCCGGACAGCTGGG 7547 31 100.0 35 ............................... CAACCTAGTATTTCCGCAGCCCTAGATAGTCCTAG 7613 31 100.0 34 ............................... CCTCCTGTAGATTCTAGTTGTCACGCTTGATACG 7678 31 100.0 56 ............................... TCTTGCATAAACCGCCGATAAAATGCGGAGTACAACGAGATGACCCCGCATGAACG 7765 31 100.0 35 ............................... AAGCGATGGAGTCAAGAAGATATTCACGGTGGAAG 7831 31 100.0 35 ............................... AAGAGCTAAAGAAGTGGAAGATGGCTTGTCCGGCG 7897 31 100.0 36 ............................... ACTCGGTTGGCGGCTAGATCCGCAGCAAGTTCCTTG 7964 31 100.0 35 ............................... AAAAGGAGACGGGAGCCTTTCGGCCCCCGTTACGG 8030 31 100.0 35 ............................... CATCACGGAATGATCGTGAGGTGAACAAGGTTGAG 8096 31 100.0 33 ............................... ACGGCAACTGGATCATGGCAGTATGTTACTGCG 8160 31 100.0 35 ............................... ATTTTTCCGTGTGTCCGCACCACTGGCACTCCCAG 8226 31 100.0 36 ............................... ACCTCCTTCGCGTGATCTACATCCGTACATCGACAG 8293 31 100.0 35 ............................... AGCTTGGCCGGCTTCGTCGGTTGTGGCCGGCTCAG 8359 31 100.0 33 ............................... AATCCCGTGCTTTTTGTGCTCCGCGAAGACTTG 8423 31 100.0 34 ............................... TCCTCCTAGACTGTCGATCGCTCGTTGAATGGCG 8488 31 100.0 35 ............................... TTCGATGACTTGCCACCATGCGGCGGACGTGTCGG 8554 31 100.0 35 ............................... CAACCCATACTTCGACGTAGTAGAATTGTCCCTCG 8620 31 100.0 36 ............................... TTTCAAACTCTCACCGGTGCGGCGCCCTTGTGCGTG 8687 31 100.0 35 ............................... GTTAAATAGGCGCTCACGTTCTCCCATTCGGATCG 8753 31 100.0 36 ............................... ATCTCCGGCAAGCTAGACCCTTGGACGATGTTGATG 8820 31 100.0 34 ............................... CTGTGACCGGCAAGCATACGGACGGCGAATACAG 8885 31 100.0 36 ............................... TTCAAGAATATGTTGACCGGATAGTGATTCAGCGTG 8952 31 100.0 35 ............................... AATTGTCCAGATTATACGGGAGTTAAGTTGTCGGG 9018 31 100.0 35 ............................... ACAACAGGTATGTGCGCGAAGCAGTAAGATCATAG 9084 31 100.0 37 ............................... AACGCGCCGAAAGCATTCCGTGCATGGCAGACCATCG 9152 31 100.0 34 ............................... CTAGCCGCATCCATGACGCGGGTGTTTTTCAAGG 9217 31 100.0 35 ............................... TTCATGGCGGCTGCGTATTTCTTCGGCCCGATCGG 9283 31 100.0 37 ............................... AGATCCTACCGCAAGAGGTCGGCGTCGAGCGCGTCAG 9351 31 100.0 36 ............................... TGTACGGTTCGCAACCAGCTTGCGACGTTAGCAAGG 9418 31 100.0 35 ............................... TACTTCCTCTACAAGATAGGCGAGCTGGTGCTCGG 9484 31 100.0 34 ............................... ATGGCGATCCCCCTAATTGATCCGTGCTTTTCCG 9549 31 100.0 35 ............................... ACCTCCTTACGCTGATTTACTCGGTACGATGCTGG 9615 31 100.0 35 ............................... GCTTGATCCATCTCCAGACAAGCAAAGCCGGAACG 9681 31 100.0 36 ............................... CTGACCAGCCGTACATTGCTCCAATTGTTACGGATG 9748 31 100.0 34 ............................... CAGACATAAGGGAAGTCCTTAGTACCTTGTCGTG 9813 31 100.0 34 ............................... ACCATAAATGTCCAATGTGGAACTCATTTTCTGG 9878 31 100.0 36 ............................... TCGACTGGGGCGGAACTGGAAGAGCTCGTCAGCTTG 9945 31 96.8 35 ....C.......................... TCTTCGTCTTGATCAGTATCTAGTTGTTGTGGCTG 10011 31 100.0 36 ............................... ACCCCATCACCTCGACTCGCTGGGCGGAAAAGTGGG 10078 31 100.0 34 ............................... GCAGATGGAAGCGGCGATCGCGAGAAGGTCCTCG 10143 31 100.0 34 ............................... GAACAGCAGCAGCTCGACGAGAATAACGCCAAAG 10208 31 100.0 35 ............................... AGGAGGCGAGGTGTGATGACATGGCCGAACACAAG 10274 31 100.0 35 ............................... ATGGTCATTATCCTTTCTTTGTTCCGTCGAAGTCG 10340 31 100.0 36 ............................... GATAAGTTTGGGTAGAATGCTCGTCTGGACATCTCG 10407 31 100.0 35 ............................... CACGTACGATCTGGTTTTCAGCGGAAGGCGTTCCG 10473 31 100.0 35 ............................... TCTTTACAAGTGCACTCGCGTTTAGCCCACTTTTG 10539 31 100.0 36 ............................... CACAGAAACTTATGGTTCAGCGTCACGGCAATCATG 10606 31 100.0 36 ............................... TCCTCCTGCTGAGCTGGATTTCAACAGCGTGGCTGG 10673 31 100.0 35 ............................... AATCGTTTCCGGCCAATCAATCATCGGAGCTTGCG 10739 31 100.0 34 ............................... GATCCGGATCCGCGAGAGCTAACCGAAAACATTG 10804 31 100.0 36 ............................... TTTCATTCGTGAAGGTTCGATGGTGAGTGCTAATGG 10871 31 100.0 34 ............................... TTTTTCGTCTCGACACATTCCTCAAAGGTTTTTG 10936 31 100.0 36 ............................... TTGACAGGGTCGTCGATGATGGCGATACGTGCACCG 11003 31 100.0 36 ............................... CTGCTCGATGCGGACGAGGTTTGCAATCAGTTCGGG 11070 31 100.0 35 ............................... TTCGAATGGTTATTATTCCGAGAGAGTAGATTTTG 11136 31 100.0 36 ............................... GAGCCGAAGTAGATCGTATGGCCGTCGCTGATCCGG 11203 31 100.0 35 ............................... CACGCTGGGCGGAGTTGCTACTCAAGGTGGGTCTG 11269 31 100.0 35 ............................... CTTTCGTCTCTCCCGCCGCCGCCAAAATTTGCTCG 11335 31 100.0 35 ............................... CTTTAATCCGTACTTATAATAAGCATCATACTGTG 11401 31 100.0 34 ............................... ATTTACATGGCCAGCGAGACCGAAATCATGCGGG 11466 31 100.0 34 ............................... ATGTCCTTCCAAGCGTGGATTTCGTCCATCAGTG 11531 31 100.0 34 ............................... GTCTACGGGGAGGTTACCTCCCACCTCGTCCAGG 11596 31 96.8 34 ..................T............ ATATAGCAAAGCATCTAACCTAAGTCGCATCACG 11661 31 100.0 34 ............................... TTCCGGGCAAGCAGCATTGGGAAATCAAACTCCG 11726 31 100.0 34 ............................... CGTCCGGCCACGTCATGGTGCAGTACGCACCAAG 11791 31 100.0 35 ............................... TTTTCTTCCCCGCCGCCGTGGGGGGTGACTAATAG 11857 31 100.0 35 ............................... CACCATCCGGAGTTTGGCGAAGCAACGGAAGGGCG 11923 31 100.0 37 ............................... GCTTAACGAGAAGTCTTGAAGTTGTATTGCCAAGTCG 11991 31 100.0 34 ............................... TTTGCTTTGATGCTACTTTTGATTTTGGTTACGG 12056 31 100.0 37 ............................... GTCTCGGGTGGGACGTTTAGGGATTGGGTTTTTCCCG 12124 31 100.0 33 ............................... ATGCCGGGGAGGCAGCAGACAATCGCCTTGCCG 12188 31 96.8 37 .....................A......... ACTGTTGGAGAAGTACACAAGATTGTGACAGCGATCG 12256 31 96.8 36 ...........A................... TCGTCGATGTAGGACTTCACGGATAGTGGAATACGG 12323 31 93.5 37 ...........A.................G. TGGCGGCGATCTGACGCTATTTGCTAACTACGAACTG 12391 31 96.8 34 ............T.................. AAGACGCCGTTCGGGATCACCGGCACGGCCAACG 12456 31 87.1 0 .........C.A...............T.G. | ========== ====== ====== ====== =============================== ======================================================== ================== 188 31 99.7 35 TCGCACCCCGTGCGGGTGCGTGGATTGAAAT # Left flank : AAGTGAAAGCGATGGGAAAGGATTTAAGGGTTTGGT # Right flank : TTATATAAACCCCATCCATCAACCTACAACCGCTGCCCATCCTCCAGCAAACGCCGCCGCAAGAAAGCATAGTCGACGCGCTGTACGCTGACGCCCGCCTCGAGCGCCAGGGCCGCGGCCGTAGCCGCCGATTGGCCCAGCACCATGAACACGGGCTCCATCCGAATGGAGCCGTAGGCAATGTGCGAAGCCGACAAGCAGACCGGAACGAAAAGATTGGCGCATTCGCTTTCCCGTGGGACGATGGAGCGGTAGCTGATCGGATAAGGCTCGCTCACTTGCACCTGGACGTCGCCTTCATTGACGACATCCCCGTTCGGCCCCACATACCGCTGCGTATGATGGGAGTCCATCCAGTACGAGCCAAGTCCGACGCTGTCCACCACCGACAAACGCCGATAAATATGGTTCTCGTTCATAACGACGTCCCCGAGCATCCGCCTCGACTCCCGAATGTACAGCTGCGGAGTCCAGTGGCCGTACTCGACGAACTCATCCCG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGCACCCCGTGCGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCGCACCCCATGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.60,-5.60] Score: 0/0.37 # Array degeneracy analysis prediction: F [2-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-45.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.41,0.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 11938-11440 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIMA01000065.1 Paenibacillus koleovorans NBRC 103111 PKO02S_CON000065, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 11937 32 100.0 35 ................................ TTAAATGACTTCACTAATGAAGAAAATGTATTTTC 11870 32 100.0 36 ................................ TTGTACCTGACCTTGTTGCGCGGCCTGCTCTGCCGC 11802 32 100.0 34 ................................ TTCGTACCATCTGCCGACGTCACTCTGACGACTT 11736 32 100.0 34 ................................ TCAGCTAATGCAGTCAATTTTCGTCATATATTCA 11670 32 100.0 35 ................................ AAGAATTGCATTGAGTATGCCGATAGCTCCGCGAT 11603 31 96.9 35 .........-...................... ATAACTACGCAGCGCTCGTTACGATCATGCTGGAA G [11590] 11536 32 93.8 33 .........C...T.................. TCTGCTTGCAACTGGAGATACTCTAAATAGCTT 11471 32 90.6 0 .........C...T.....A............ | ========== ====== ====== ====== ================================ ==================================== ================== 8 32 97.7 35 GTCGCACCCTGTGCGGGTGCGTGGATTGAAAT # Left flank : GCACTCCCTGCAGGAGGAAATCCGGAAGCTGCTGCCCTGATAGAAATAGCCTGCCGAGAAGGCGAAGCGGCAGCCGCTGACTACATGGGGTCCTTGCGCTGATTAATATGAAGTCAATAAACCAAGAGATTTTTTGAAAAAAGAGAATGGTGCTGTTATCATGAAAGAGGATGTTAGGAAATAGTTTCTAAGTGAATGACGTGGCAGAGTAAGAAGCAAGAGAATAGACACTGCCCCATTCAAAGTGTTGAAGCTGAAGCTCCAGACGGTAATTGACCCGGCTCAGGGCAGCTTGCGATTGGAATCCGGAAAAAACACTGGTTCTGTAGTACCTGCACATGGTGCGAACCCCAAGCGTACACGAAGTTGCCGGACGGTTCGCACCACGTTTTTGCAAGGAATTGTAAAATTCCAATGTCGAAGAGAAGGTCTATAACGTGAGTTGATTGATTGTCGCTCCGATTTATGCCTTTATTGGGATTTTATGATTGTTTTTCGCT # Right flank : ACGGCGACCGAGACGCTGAAGGCGCGCGGCGAGGGACGTTGTCAGGTTAGCGGCTCCAGCATCCAGCCTGGAGTTTGAGAGGGAATCCGAATAGGAGCCACGAAGCCGATATGATTGTGCCTCCAACCGATACCGAATCTGTCTGATCGTTCCGGGAAGGGCGACTATTTAAACCCGGCAGCACGTAAGCGGACCGTACGGCCCTTATGTGTGAACAAAAGGGCTATTTTACTGGGGGAGCGGACATACGATTCGTTATTTGGGTCAAAAGGGAGGTTTGGAGTGGGAGGACGGGCAAATAAGAGCATCTGTGTCCGCTAACTAAGCAGTCCAGCTGCTTTCAGACCAAATAAGGTATTCTGTGTCCGCACCGAGTTCGGCCTGGCGAGGCACTCCGATCCCCTTCAATAGCTTCATCGACTCCGCATAGCGAACGAGTGCGCTTATAATCCTTAACCTGATAACATTGACCCGTGCGGGTGAATGGATTGAAAACAAGA # Questionable array : NO Score: 9.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCTGTGCGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCCTTCGCGGGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-5.50,-4.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [30.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 22363-38434 **** Predicted by CRISPRDetect 2.4 *** >NZ_BIMA01000065.1 Paenibacillus koleovorans NBRC 103111 PKO02S_CON000065, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ======================================= ================== 22363 31 100.0 36 ............................... AGGGTAAAAGCGTAGCCGAGGTTGGAGCCGAATTGG 22430 31 100.0 36 ............................... TCGATATTCCGACGCGCCCGCGCCTCCATGCTCGTG 22497 31 100.0 36 ............................... CTTTCGCCTCATCCGCTGTCTGCGGCTTATTGGTCG 22564 31 100.0 34 ............................... GATACGAAGGGCAACAAAGGAATCGCTGCAGGCG 22629 31 100.0 33 ............................... CTGCCGATTGGAAGCTTGTACTTGACCCGTCTG 22693 31 100.0 34 ............................... TTCAACGCCAAAAGCAAGAACAAGCCGGGTATCG 22758 31 100.0 34 ............................... GAGCGCGAGTTTAGCCTCGTTCTCATCCTTAATG 22823 31 100.0 33 ............................... TCAGGCGGTCGCTCAGGCAGCGGAGCCTCCAGG 22887 31 100.0 36 ............................... CACGCGAACCGTAGCGTGTTTGGCGACCCGCTGACG 22954 31 100.0 36 ............................... AGCGTGACGGACAACTCAACGTAGTCGGTGTTGATG 23021 31 100.0 35 ............................... ATCTATCGGTATGAGACACATGATTGACACCCTCG 23087 31 100.0 36 ............................... CTGAGTTTCAGTGGCTGGGTAGGCGCTGTTGACAAG 23154 31 100.0 33 ............................... GAGCCGAATATCGACCTTTGCCCACGTGTCCGG 23218 31 100.0 35 ............................... CTGATATGGCTAGGGGAGAAAGTCCTTGTCCCACG 23284 31 100.0 36 ............................... CACTACATCTACCCGCGTCTCACTCGTCAGCGGGTG 23351 31 100.0 37 ............................... GACTCTACGATCCGGGGTACGCTTACGACCAAGGACG 23419 31 100.0 35 ............................... GCGCCAAGGTACAGCTGATAGCTACGAGGTATACG 23485 31 100.0 35 ............................... ATTTACCCGTTCTCGCCTGTCTCGCAGGGCACCAG 23551 31 100.0 36 ............................... CTGCCATATTGTCAACAAATACAGGCAACGAATCCG 23618 31 100.0 35 ............................... TACTGTTCTGAGAGCAGCCGTCGTAGGAATTAGCG 23684 31 100.0 35 ............................... TCCAGGAGCCACCCAAACAGGTTGATAGCTCATCG 23750 31 100.0 35 ............................... TTCGACTTCGATTTCTTCCCACCAAGCAGCCCCGG 23816 31 100.0 36 ............................... ACAGCTATGAAGCTGTCGGCTGCGGGGAGGATATTG 23883 31 100.0 34 ............................... TCGATCGCGCTCTTCGGCCCGCTGTTCGACTCGG 23948 31 100.0 34 ............................... TGATTGCTTTTTATTGTATCCTTAGAGTCTTTTG 24013 31 100.0 35 ............................... CCGATCACCAGGTAGGACTTTTTTCTAGTCTCCCG 24079 31 100.0 35 ............................... AAATCATTTACTATATCCAGACTTGAAACGTCTAG 24145 31 100.0 35 ............................... AGACAATGCAGGAACATGTGCAGACAGATGTATAG 24211 31 100.0 34 ............................... ATCTCGCAACGTCGAATATACTATATAGTAAGAG 24276 31 100.0 35 ............................... TGCAATTCCGTTCCAACTAGCCGGTGAATAGTAGG 24342 31 100.0 36 ............................... TGGCTTGTCGGGTTCTGCCGCGGTCATCAGCGCTGG 24409 31 100.0 37 ............................... TCGCATACATCCTCACAAAATGCAGATTTTGACCAGG 24477 31 100.0 36 ............................... CTCGATCCAAGCCCAGCACAACACGCCAACGTCGAG 24544 31 100.0 35 ............................... ATGTAGCCATTCGCCTTTAAAGCCTTTGATATAAG 24610 31 100.0 35 ............................... ACAGCGAGATATGCTAGTGATTTCGAAACCATTGG 24676 31 100.0 36 ............................... CTTCAATTGGTAGAGTCCGCGATAGCGCTCGGCATG 24743 31 100.0 33 ............................... TCTTCCGGTCCGGGTACCGGATCACTTCCCGGG 24807 31 100.0 36 ............................... TTCCTTCGTCATATCTTCTTGCCCTCCTCATGTCCG 24874 31 100.0 36 ............................... GTCCCGCGTGATCCTCGGAGGCTCCTCGGGTTCTGG 24941 31 100.0 38 ............................... TCGATCCTGTCGACTACCCTCCAGATCGTGCAGAGCCG 25010 31 100.0 36 ............................... TCGTATATCCGAAAGATACGAGGGTAGGAGAATTCG 25077 31 100.0 35 ............................... CTGAGAAGGGCAACCTCTTTTACGAGGAGTTGTCG 25143 31 100.0 35 ............................... ACCGTTACCGCCTGCAACTGCTGCGGCAGACCGAG 25209 31 100.0 35 ............................... CACATCCCATCATAGGACTTCTGTGTCTCTACTAG 25275 31 100.0 34 ............................... CCCTGGATACCCAAGAGATAGGAGTATGGTACAG 25340 31 100.0 38 ............................... TGCCCGTTAACCTCAGCACCCAGTACGTCCGTAGGTAG 25409 31 100.0 36 ............................... CGTCGTTCCATAGCGAGTTAGTAGCGCTCCAACGAG 25476 31 100.0 34 ............................... TAATCGTGGTACCGTTGTTCCCTGTTGGGTACAG 25541 31 100.0 34 ............................... ACAATAGTGCCGACAAAGTCGATAACCCCGCTAG 25606 31 100.0 36 ............................... ATCTTTTTAACCTCCCAAGTTAATTGAATATTATAG 25673 31 100.0 34 ............................... CATAATTTTCGACTTTGAAGCGTTTTTTTGCAAG 25738 31 100.0 35 ............................... GATTGTTACGGTCAGTACTACATGTCTGTTATTGG 25804 31 100.0 35 ............................... TCGCCTGTTTCGCAGGGTACCGCATTTACGGCGTG 25870 31 100.0 36 ............................... AAGATCATGAGGAGGCTATTAGACCATGAAAGCTAG 25937 31 100.0 35 ............................... ATAGTCTCTGACACTCACGTGAGTTGCGCCGTTTG 26003 31 100.0 37 ............................... TCTTTGGGGTCACATTTACTGCTGGAAGGCTTAAAGG 26071 31 100.0 35 ............................... TTTTAGGTATCGTAAATTCATTATATCCTCCCAGG 26137 31 100.0 35 ............................... AATCATTTTTTCATGGCCCCACTCAACTGATATAG 26203 31 100.0 34 ............................... TTGTCAAGTCTTTTTTATACACATAAATATTTAG 26268 31 100.0 35 ............................... ATCTTTTTAAACTCTCCCTTTAAAATCTGCCTTAG 26334 31 100.0 35 ............................... TAGCACACGAAAAACTAGAATTCCTACAGCAGTTG 26400 31 100.0 36 ............................... TCTCCGAGGGCGGAGAATTCCCTTCGCTTGTTATGG 26467 31 100.0 35 ............................... CCTTCGCTTGTTATGTCGCTGGCTGAGTTGATTAG 26533 31 100.0 35 ............................... AATGCACTAACCCCTTTTCGAATTGGAAGTAGCGG 26599 31 100.0 38 ............................... ACACCGTTAACTTCGGTGTGAGCAAGGAAATGACAAAG 26668 31 100.0 35 ............................... ATATCAATCCGGACGGGACGCAGTACGTGGTTGCG 26734 31 100.0 34 ............................... CGGATTTTTGTTCAGCTCGATCAGCTTGATCCGG 26799 31 100.0 36 ............................... ATGACATCGTAAGTATTAGCAGCAACATCCGTCCAG 26866 31 100.0 36 ............................... AGATCAGCGGCGTCGATTGTAACCATCGTTTACGTG 26933 31 100.0 35 ............................... CTTCTGCATATCCTTCACGCCCTGAAGCAAGTGAG 26999 31 100.0 35 ............................... ATACCATCCCTGGAGCTCCGAAAAGACAGTGCTCG 27065 31 100.0 34 ............................... TCCTTTTCGCCCTTTGTCTTTGGCTCCGTAGTGG 27130 31 100.0 37 ............................... CTGGCAGGAGACGGTATAGCAAGGCTGCAGGAAGTCG 27198 31 100.0 35 ............................... TCTTTATAACGGCAAGGCGTCAATCGCATTTGCCG 27264 31 100.0 36 ............................... TCTTAAATATTTAGCGAGTTTATCAAAAGCGTTTTG 27331 31 100.0 36 ............................... ATTTCAGCAGCGCTCAAACCGGCAGCAGCGGATTGG 27398 31 100.0 35 ............................... AATACTAGGGGGCTTACCCCTATGGTAATCAATGG 27464 31 100.0 35 ............................... CGGTACCTGTGAACGCTCCTGCTCCAATCCCGGTG 27530 31 100.0 35 ............................... TTATTAGGGTCGATTCTCCACCAATAGCCAGCCTG 27596 31 100.0 34 ............................... AGCTTTTCGTCGTAGGCAATATATTCGGGTGGAG 27661 31 100.0 35 ............................... AATAATGGAGCTGGCTGCGATCCCCCCGGCGGCGG 27727 31 100.0 35 ............................... GCCCATGGTTACGAACCAATAACGGACGAGATAAG 27793 31 100.0 35 ............................... AACGTCACCACATCTGGATTTGCTCCACTACCAAG 27859 31 100.0 35 ............................... TATCACCGGAACCAGTCCGATGAATGGATCGACAG 27925 31 100.0 35 ............................... CTGACCTGTATCGCACGAAAGCGAGTGATTGTGAG 27991 31 100.0 36 ............................... ATCCTTTAATCCTATTGATATTGTTGATAGTGCTGG 28058 31 100.0 34 ............................... AATATGAAACATTGTATTACAGCATTTTGGAATG 28123 31 100.0 35 ............................... AAATAGGGAGTGATGGCCGTGGAAGAGAAAAAGAG 28189 31 100.0 36 ............................... TTGTCAGTATCCGTTATAACAAAGACACTGACGAAG 28256 31 100.0 38 ............................... CACCTCACCGGGCTGTCCGCCTTCTAACGGAATAAGCG 28325 31 100.0 34 ............................... ACATCTTCAATCTCGTACAGTTTACGCGATGTTG 28390 31 100.0 35 ............................... CGAGCAATTCAGCAATCACGACATCGCGCTCCTGG 28456 31 100.0 37 ............................... GGTCAGCATGGCGATTTGATAAGCCGTCACGATGGCG 28524 31 100.0 35 ............................... CAACAACGTGACGTACTCTTGGCAGATTACGTCCG 28590 31 100.0 34 ............................... CCCTGCTCCGGTGAGCGCGTCGGAGTGGAATGAG 28655 31 100.0 35 ............................... AGCATACCCCCTTCAAACAGCAGGAGGCATTCAGG 28721 31 100.0 37 ............................... AGTTCACTGAGCTTGGATAGGTGGAAAGCAAATCAGG 28789 31 100.0 37 ............................... AACCGATACCCTTGTTCGCGGCGCGACAACACGCGCG 28857 31 100.0 36 ............................... GTTGCAGCTGTTTTTGGATTTGTTCATAAGATTGAG 28924 31 100.0 37 ............................... TCGCGAACAACCGCTAATCCTGATGATTTCGACCGCG 28992 31 100.0 34 ............................... CATACCTCACTGCCGTCATCGAACACATGACTGG 29057 31 100.0 36 ............................... AAACTGACGATGCAGAAGTAGCGAAGTTCTTCCTGG 29124 31 100.0 34 ............................... TCCGCAGCCTCATAAGCTGCGACATCCTCGTCCG 29189 31 100.0 34 ............................... GGCTCGACCCAGTGCTCGTACAGGCGGCTATCGG 29254 31 100.0 35 ............................... GCCATATACCACTTGTCCGGCTCGTCATCGAAGAG 29320 31 100.0 35 ............................... TCCGGATTCAATCCTCTTAATCTCCGGCACCGGCG 29386 31 100.0 36 ............................... GAATTGACGTCGAAACGTTTTCCAGCGTCGACCTGG 29453 31 100.0 37 ............................... CGGTTTGCCTGGCCGATCATCAAGAGGGACATCGAGG 29521 31 100.0 35 ............................... ATCTGTCATTACTGCATAATGGAACATGTCTAAAG 29587 31 100.0 34 ............................... CTCCGGTTGGACAATACGAACCCTGTTGCCGAGG 29652 31 100.0 34 ............................... ACCATTTTATTACAAGAACACATGAAAACTGTGG 29717 31 100.0 33 ............................... AGCACATCCAGTCGAACGTCGATCATTACGTCG 29781 31 100.0 35 ............................... CCTCGAGCGTAATCACGAACTGGTTTACGGCCGTG 29847 31 100.0 35 ............................... TCCAATCCAAGTCTGCCTTTCTGAGTTCGTTATCG 29913 31 100.0 36 ............................... GATCAGATTTGGAGCTTGGAGGAGGACCAGCAGGCG 29980 31 100.0 36 ............................... AGGAATCCAGCCATTGATGTGATCCCGTTGATTAAG 30047 31 100.0 36 ............................... TCCATCCCCCCAAGAGTGGATCTCATTACTCAAGCG 30114 31 100.0 36 ............................... AACACTGGGAAGCGCAACTGAGAAACAAAATTCAAG 30181 31 100.0 35 ............................... TAAAAACCAAAGGAGCAATCACACCATGGCAAACG 30247 31 100.0 35 ............................... CCGGTTGCGTCGTCGACCGTATGCGCCTTAGCGTG 30313 31 100.0 34 ............................... CCTACCCCGTCACCGGATACAATCGCGCCTTCGG 30378 31 100.0 34 ............................... CTTGCCGCCTTTGCCCGTAACCTTCGCGAGGCGG 30443 31 100.0 34 ............................... CCTTCTCATCCCTGCCGGGTTCGTATTTAAAACG 30508 31 100.0 35 ............................... ATCCATCATTTTCGATAACTCCGCCCGTGAACGCG 30574 31 100.0 34 ............................... ATGGCCGCGAAGGCGCGCAGCTCCGACGCCGTGG 30639 31 100.0 37 ............................... ACCACATCGATGGCACAAGAGCAGCAGCGAACGCGGG 30707 31 100.0 36 ............................... CCGGTTTGATCAAAGCCGGGGTCGAGTATATCAAAG 30774 31 100.0 34 ............................... AGGCTAGAATTGAGCTTGTTGTATTCGGTCTCGG 30839 31 100.0 37 ............................... ACAGTAGGCCAAACGACGAGATGAGCCCCTTTAACTG 30907 31 100.0 35 ............................... AAAAAGCTTCCGCTTGTCGATATACTCCCGCGTCG 30973 31 100.0 34 ............................... CAACTGCCGCCCTTAGTCTTATAGAGTTCCCGCG 31038 31 100.0 35 ............................... GCCAGGATTCCAGGACGATAACGGGTTCGGTAGCG 31104 31 100.0 36 ............................... CTCAGCTCGTCCGCAATGGTGCGGAGTACTTCCGCG 31171 31 100.0 35 ............................... ATAATGGCCGCGCGACTAAGCGAAAACGAATTGAG 31237 31 100.0 34 ............................... ACGTACATGACGAGGTTGTGTCTGATGCGCCGTG 31302 31 100.0 34 ............................... GGCTCGACCCAGTGCTCGTACAGGCGGCTATCGG 31367 31 100.0 34 ............................... TTACCGGTTGCATCTTTTTTGATTGTTTTTGTGG 31432 31 100.0 35 ............................... CCTTGTCGGTTGGGCCGAAGTAGATACTCGCCGTG 31498 31 100.0 36 ............................... ATCAAGGCGACGGAGGGCGTAGGCATCACGGATATG 31565 31 100.0 37 ............................... GTTTCGTACAAGCATTGCGCCGATGATCATACGTTGG 31633 31 100.0 36 ............................... ATCAAGTGATTTGAATTTATGAACTAGTTGTTGTTG 31700 31 100.0 39 ............................... CATTGAGAGAATGGGTCCTCATTCGGAATGCGATACTGG 31770 31 100.0 36 ............................... GCTAGGGTATGCTGCTGACGGCGTGACGATTGCATG 31837 31 100.0 35 ............................... ATGAAAATCCCCATATATCGGGGCAGGAAAATCAG 31903 31 100.0 35 ............................... TCATAAGTCGCTCAAACGAGCGTTGGATCGAAATG 31969 31 100.0 34 ............................... AAACGATCTTGAGCAAGCTGGCCGCGATCGAAGG 32034 31 100.0 36 ............................... ATTTTTCGCGTCGACCAACTGACTGCCCAGCTCCTG 32101 31 100.0 34 ............................... TCTTCCCACGTGTCCGCCCGGACCATAAATCCGG 32166 31 100.0 34 ............................... TGAAATTCGACCATCAGCGTCGTTTATAAGTGCG 32231 31 100.0 34 ............................... CATCTCGTAATGCCGGATCTCTCGTTTACTCACG 32296 31 100.0 34 ............................... TCGCCATTTATTATCAATCCGGCCGACGCGCAGG 32361 31 100.0 35 ............................... CAGGCATCGTACATGTTTTGCAGTGATATAAGCGG 32427 31 100.0 35 ............................... CCGACGGTAAGTGCGTTGTTAAATATCGGGGCTAG 32493 31 100.0 35 ............................... TCCGGGTTGATCTGGACGGCGCGGAAGTACTCTGG 32559 31 100.0 35 ............................... ATCCGGTGTGCATCATTGACCCGGATCTCAAATTG 32625 31 100.0 35 ............................... AAAACTGAATGCCCCGCTTGGGAACGCGCCGTTTG 32691 31 100.0 37 ............................... GCGGTACAAAATACGCGCATTCAAAGGGCTAATGAAG 32759 31 100.0 33 ............................... CTCTCATAGGAGTTATTTGCGCAGGCGACGGAG 32823 31 100.0 35 ............................... ATTTACCGGCTTGAGGGGGAGGCGATGGTCGAGCG 32889 31 100.0 34 ............................... TGGACGTATGAGCGAAACGAACGTTTGAGCTGTG 32954 31 100.0 35 ............................... CTTAGTGCTCGCGTCAGCTTGACGTACTGTTCGCG 33020 31 100.0 34 ............................... ATACGTACCTATCGGGATTAAACGTGATTACCAG 33085 31 100.0 35 ............................... TATGAAAATGACCCATGTAAGAAACAACAGCCTGG 33151 31 100.0 34 ............................... CGTGTTTCCAATCATATCTAATATGTTCCCGTTG 33216 31 100.0 38 ............................... TTGTGGTGGTGGGCGATGGATTACGCCCAGGATGGGGG 33285 31 100.0 35 ............................... ACAACAAAGAATCTATCGGGTGTATCCGTGGGTAG 33351 31 100.0 35 ............................... ATCGGTCAGTAGCCAGGAAAAAATGAGCGAGCTGG 33417 31 100.0 34 ............................... CGACAGCGGATGCTGGATAAACGGTTTGAGATCG 33482 31 100.0 36 ............................... CAAGAAGGGGGTGAGAAAAGAAAATGATATGGAACG 33549 31 100.0 35 ............................... CCCTCTGGATATAGTCGATAAACAGGAAACGGCAG 33615 31 100.0 34 ............................... GTATTGACATTTATTTAGCGATCGTTTATATTAG 33680 31 100.0 36 ............................... TTGTCTGAGACCTTTAAAATGTCTTGCTTTCTGAAG 33747 31 100.0 35 ............................... TCAGCAATCACTAAAAGCCGGCGGGCGAACGCGGG 33813 31 100.0 35 ............................... CCGATATCGACTTACAAACTAGTAACTAAATGAAG 33879 31 100.0 36 ............................... GAGCCAATATCGAGGGGATCAAGCGTGATCTCCCAG 33946 31 100.0 35 ............................... TTTGTACCGTCCACATAAACGTTGTAGCCAGCCAG 34012 31 100.0 34 ............................... TTCCTTCTCGCGTTCTTTGTTGCCGGTGCGATCG 34077 31 100.0 35 ............................... AAAACATAATTCTGCCACGTGCCTCCGGGAGATTG 34143 31 100.0 37 ............................... CCTTACTCTTCCTACCCTAATTTGACGGTATTTACGG 34211 31 100.0 35 ............................... AACAGAAGAACGTCCAGGAGCTGGACTTCTTGCGG 34277 31 100.0 39 ............................... TGTTGCGGCGGAGCTGCTTGCTCCCAGCCTGCCGGCGGG 34347 31 100.0 36 ............................... ATTCTTCGTGTCCTTGGACAAGGGCCGCAGCCACCG 34414 31 100.0 35 ............................... CAGGTATCAGCATCCGACACGTCCGGGAATGAATG 34480 31 100.0 36 ............................... ACCTACGCGATCAGCGTACCGGTCATCACGGTTTGG 34547 31 100.0 36 ............................... CTGTCTACCCTGTTCGGGGCGTTGTTCAATGGGCTG 34614 31 100.0 35 ............................... GCGGTGATGAGGACGACGTACCCCATTTGTTTAGG 34680 31 100.0 36 ............................... TCCATGGCTTGCAGGACGTGTGATTTTATATCCTCG 34747 31 100.0 35 ............................... GTGGGAAGGGCGACAAGGAGCGAGAGGTCTACTTG 34813 31 100.0 37 ............................... GATCGTGTATGTGCTCACGTGACCGCCCCTTTGATCG 34881 31 100.0 37 ............................... TTTCGTATTACCAAGAACTTTGGAGAGTTTGAGAGCG 34949 31 100.0 35 ............................... ATCTTGAACATGCTCATCGCGGGTCGGCCACCTCG 35015 31 100.0 35 ............................... ATAGTTCCACTGTCAGTTATTGAGGATAAAGTAGG 35081 31 100.0 34 ............................... AAAAAAATTGCTAATATCAATGTTATCGGCTTTG 35146 31 100.0 35 ............................... GTTGAAAAATGTTTGTTCTTTGTACCAAGTTTCCG 35212 31 100.0 34 ............................... GAGAAAAACGAATTATATCTTCGAAAACGCCTGG 35277 31 100.0 38 ............................... GACGCAAGAGGTAATCAAGCCCCGGCGTTTATCTCCGG 35346 31 100.0 36 ............................... TCTGACAAACTCCTTGGAGGCTCTCGTTTGGGTAGG 35413 31 100.0 35 ............................... ACCGACGGAGTATACTTCTCCGGGTTTAGTAACGG 35479 31 100.0 34 ............................... GGTCAACACTAAAACCGAAAATATAAATTTATTG 35544 31 100.0 36 ............................... GACTACAAGCACGGCAAGGGCGTCCCTGTCGAGGCG 35611 31 100.0 35 ............................... CCCGAAGGCGGTTCCTACCAGGACGTGCTGACGAG 35677 31 100.0 35 ............................... AGAGAGCCCCATGTCGAGTGCGCCCATGTTGATTG 35743 31 100.0 36 ............................... CCCTCGATCGCCGTAATCCCCGGCCTGATGCGAATG 35810 31 100.0 35 ............................... TTGCGTGAAACTTTGGCGGCGGCCTCTTTCCGGGG 35876 31 100.0 36 ............................... ATTCCGTTGTCAGCCATAATGCCGGTCGCCGCAGCG 35943 31 100.0 37 ............................... CGAAAACATGAGGAACCTCGATCCACGGAAACGACCG 36011 31 100.0 36 ............................... TATGCTCTTGATTTCGTTCTCGAACAATTCAAACGG 36078 31 100.0 36 ............................... TAAACTACAATCCCTAGAGTATCAATACATTACAAG 36145 31 100.0 36 ............................... CAAGGTTACCGAGGATAGGGTTAGATTGGGCGAGCG 36212 31 100.0 35 ............................... TATACACTTCTCGCAGATATTTTCATTTTTGCTAG 36278 31 100.0 33 ............................... ATATCGTCCCGTTGGAACTCTGTATACGTCAAG 36342 31 100.0 36 ............................... TTTGAAATCTAAGTAGTGTCCCAACTCATGGTATGG 36409 31 100.0 35 ............................... AGTACGAAGGCGGAGGAGTTTTTGACGATTTGCAG 36475 31 100.0 35 ............................... GAGACTATCTGCTGAATGCCGAATCGGCTCACCGG 36541 31 100.0 34 ............................... TCCGTTTGGTGATCCGGGTCAACAATGTCGGAGG 36606 31 100.0 35 ............................... CTTCGACCTTGACCCATGCTCGCCGGGACCCCGCG 36672 31 100.0 36 ............................... CCACATGGTCGCTTCGGTTTACTTGGCATAGGCGCG 36739 31 100.0 35 ............................... CTCTGTGATCTTTTTGCTATTTACAAACATACGTG 36805 31 100.0 37 ............................... CGGATCCTCAGGTACTTGCGCAGCCAGATCGAGCATG 36873 31 100.0 34 ............................... ACGCTAGCGGCGATTTTCGAGCTAAGAGCTGCGG 36938 31 100.0 38 ............................... TCTCCGTCGTCGTGCTGATCATCTTCTCACCTAACCTG 37007 31 100.0 35 ............................... CTTCTGGTCGACCCGCGTCCCGATCTTACCAAGGG 37073 31 100.0 35 ............................... GTTACAGCTCCAATTGAAAAAGCTGCACCTAATGG 37139 31 100.0 39 ............................... CCTTTCAGCCCCGGGCTGCTGATAAGGATCAGATACGGG 37209 31 100.0 36 ............................... GTTTCAATGAGGTAACCGTGTTGTGGGAATACAACG 37276 31 100.0 35 ............................... TCGACAGTATGCCGATTTGGACGCTGCTTTCGCTG 37342 31 100.0 35 ............................... TCGATAGAGAGACCGAAAGACTAGCACATCTCTCG 37408 31 100.0 36 ............................... TTTCTAAATCAGCTAGTAGAAATGCCCTGCAAATCG 37475 31 100.0 35 ............................... TCCTTAAGCGTCCGTTCCGCTTGACCTACATGCGG 37541 31 100.0 36 ............................... TGGTGAAGCTGATTGGATTTATAGTATCCATACCGG 37608 31 100.0 35 ............................... ATCCAACTGATCATAATACTCTTCTAGCAATTGAG 37674 31 100.0 35 ............................... AATGGCGGCAACCTAAAATATTGATTGTTGATGAG 37740 31 100.0 34 ............................... TTGGTGCGATGATAGTCATGCCTGTTATTGCGTG 37805 31 100.0 37 ............................... GCATAACCCTCAATAGCTGCTGCTATCTCATGCATTG 37873 31 100.0 37 ............................... TTCCTTCTCGCGTTCTTTGTTGCCGGTGCGATCAGCG 37941 31 100.0 35 ............................... TCCGCGTCCGGATTGTCCCAGCCGAAGTTTGCCTG 38007 31 100.0 36 ............................... GCCCCTCGCTCCGGTTGGACTCGTGTCAACTCCTCG 38074 31 100.0 33 ............................... CAATGAAATTTATGCTGCTCAGAGTGCTTGTAG 38138 31 100.0 37 ............................... GCCGGGCGCTATCTAAACACATGCGAGGACGTGATTG 38206 31 100.0 34 ............................... ATTTGTTTTTGGTTACTTTTTTCTTTCTTGCGTG 38271 31 100.0 36 ............................... TGTGGCCCTTACTTGGACGGCCGGAACGGATAATGG 38338 31 100.0 35 ............................... AAGGCATGGTTGATGCGCTTAATGGTGTGAAGGAG 38404 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ======================================= ================== 243 31 100.0 35 TCGCACCCCGTGCGGGTGCGTGGATTGAAAT # Left flank : ATGAATATCCACCGTTTCTGTGGAAGTAGGTGGGAGAATGCTGATTCTAGTGACGTATGATGTAAGTACGGCAACCAGCGAAGGTCGAAGACGGTTGAGACAGGTGTCGAAGGTCTGTCTGGCCTACGGCCAACGAGTTCAAAACTCCGTATTTGAATGTATTGTAGACGCTGCTCAATTCAAGTTGTTGAAGCTGAAGCTTTTGGCGGTGATCGATCCGGACCAGGACAGTCTACGATTCTATCAGTTGGGAAATAGTTACAAACACAAAGTGGAACACATAGGTATAAAAAGTTCGCTGGATCTCGAAGGACCGTTAATTCTATAGCGTGTGCGCTTGGTGCGAACCCCAAGCGCACACGAAATTGCCAGGGGGTTCGCACCATGTTTTTGTCAGAAATTGTAATTTTTATCTGCAAAAGAGAAGGTTTAGAGCTTGGGTCTCTTGATTATTGTAATAAAAGATCCTATTATTGGGGATTTTTAATTGTTTTTCGCTG # Right flank : ATTCCATCCCACTCCTTTTTGGTTTCGGTTACTATAAG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCGCACCCCGTGCGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: R [5,7] Score: 0.37/0.37 # Reference repeat match prediction: F [matched TCGCACCCCATGCGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.60,-5.60] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [71.7-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.27,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //