Array 1 61845-58974 **** Predicted by CRISPRDetect 2.4 *** >NZ_SPHS01000001.1 Flavonifractor plautii strain 1001175st1_C9 NODE_1_length_437508_cov_35.5241, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================= ====================================== ================== 61844 33 100.0 35 ................................. TGCTGGACGACGTTGCTCAGGTCGACCACGGCGGC 61776 33 100.0 36 ................................. TGGAATTGCGAGACGAGAGGTACCAACTGAGCCAGA 61707 33 100.0 35 ................................. CATGCCTCTCCGTGGTCTTTGTCCTCGGGTGTAGC 61639 33 100.0 37 ................................. CGCAGCACCATCATCCCGGTGCGGTCGGTCGGTGCGC 61569 33 100.0 34 ................................. ATTTTGCAAAGGAGGCACAAAGACATGAGTGAGA 61502 33 100.0 35 ................................. AGAAAGGAGCGATCACATGGAACGCATGACGCACG 61434 33 100.0 34 ................................. CGCGACGACACTTAACAGTACAATTACCGCGCAC 61367 33 100.0 33 ................................. AAAGATTTTGCCCCTGTCACCTCTGAAAAAAGT 61301 33 100.0 35 ................................. TGACATGGGCGAGGATGTGGATAACTGTCCTACCA 61233 33 100.0 34 ................................. TGCGCCCCAGTAACCGCTGTCCTGGCCGCTCTCA 61166 33 100.0 34 ................................. TACCGAGAAATCACCCCACATTGGGACGGGAACA 61099 33 100.0 34 ................................. CTCCGCCGCCTTGCGCTGCATCATGGCATCGTAC 61032 33 100.0 34 ................................. ATTATTAGCGGATATTTTAGTGCGCGATCCAATT 60965 33 100.0 34 ................................. CGAGCTTGAGCATATTTACACAGAGTTGCGCAAA 60898 33 100.0 35 ................................. TAGATTAATGCCTACCGCCAGCACCCAGTCATCAT 60830 33 100.0 37 ................................. TTTGCTTGTCCGTCAGCCGTGCAGCCATGCAGCCATG 60760 33 100.0 35 ................................. AGAAATAAGAGGTGAATTAAATATGACCATCATCC 60692 33 100.0 34 ................................. CGGCTATATCCCTTTCACGAAGGAGATGGCCGAT 60625 33 100.0 34 ................................. AGAGGCTTTACAAAAGGCTTGGAGTGTGGTACAA 60558 33 100.0 34 ................................. TCCATTGGTGTGCTCCTTGGCCTTCTCCGCCATA 60491 33 100.0 34 ................................. ACACCGGAACAGGTTAGCGCCTCCAGGTGGTCAC 60424 33 100.0 33 ................................. GGACTATTTGACCGCCGCCGCTGTCGGCATTGT 60358 33 100.0 35 ................................. ATGACGGCTCCAGTCACCCCATCACCACCAAAGCA 60290 33 100.0 34 ................................. TAATACAGCCTTGATGATTGTGATGTGATCCCGC 60223 33 100.0 36 ................................. AAACAAAGGGAATTTGCGCGCCCTGTTCTGCTCATC 60154 33 100.0 34 ................................. CGTGGTGACAGGCTTCGGAAGTTACGGGAAGGGA 60087 33 100.0 33 ................................. AACGCACCCCGCCGAATCCAAACGGGAGGCCAA 60021 33 100.0 35 ................................. CTCCGGCAACCTCTCCTTGACGCTGATCCACTCGC 59953 33 100.0 36 ................................. CATAGGCATCCTCGTTAAATGCTCTACAATTTGTAA 59884 33 100.0 35 ................................. ATCAACACTTTAGTAAGTGCATCCTCAATCTTTGC 59816 33 100.0 37 ................................. GTGTCCCTGGAAATGGATGAGGAGCAGTTAGCCGCCA 59746 33 100.0 35 ................................. ATACCATACTCCACGCTTCCAGGCCCCTTAATTGC 59678 33 100.0 34 ................................. CATTCGTCGCATTTGTGAAGAAACGGGTACGACA 59611 33 100.0 34 ................................. TGCCTATTGTATCAATACAATCACACAAGGTTGG 59544 33 100.0 34 ................................. GTCAACAAATACTGTCCCAAATTTATAAATACTA 59477 33 100.0 34 ................................. TCTGTCCACCATGTTAATAACTGTAATTGCTTTT 59410 33 100.0 34 ................................. AGCAAAGGCAAGGCGGTGAAAAATCACCGCCTCC 59343 33 100.0 33 ................................. TAAAAAGGCGGGGCCGGATTGGGAGTGGTCAAT 59277 33 100.0 35 ................................. TGGTTTGTTAATCTTAAATATGCACCTACAGAATC 59209 33 100.0 33 ................................. ACCCTTGGAGTTATAAACACGCTGGTAAACACC 59143 33 100.0 38 ................................. AGTGAGAAATACGACATCACCAAGCATCCCCGGTATAA 59072 33 93.9 34 ............A............G....... CAGCGGCTGGACCGCGGCCACATGGAGTATGTCT 59005 32 93.9 0 .................-.............C. | ========== ====== ====== ====== ================================= ====================================== ================== 43 33 99.7 35 GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Left flank : GGACGCCTATCCACCCTTTTTGTGGAAGTGAGGCCATTATGCTGGTTTTGATTACCTACGATGTCAATACAGCGGATGCCGCCGGGCGCAACCGCCTGCGGCAGATCGCCAGGCAGTGCGTCAACTACGGCCAGCGGGTTCAGAACTCCGTCTTTGAGTGCAAGCTGGATCCGGCCCAGTACAAGCTGCTTCAAGCCAAGCTGTGCGCAATCATGGACCCCGAACGGGACAGTCTCCGCTTTTATTCCCTGGGAAATCGCTATGAGCAGAAGATCGAGCACTTTGGCTGTAAGCAGACCTACCTTCCAGACGAACCTTTGATTTTGTAGCGTGCGAAGTCCAAGATGACACGCCTTCTCCGGCCGGTTCGCACCCAAAAAGCATAAAGGAAAGCTTAATGGAGCATAGGCGCGTTTGTTTTTGTATGCTCAGCCTTCTTCCCCTTGTGCAAATAAGCAAATTGAGCCAAGCAAACTCCCTGCTCTTTGGTAAAGTTTGCT # Right flank : GTCTTACAGGGGCGCCTGGTCAGTTTGCAGGAGACGCCGCATAGGGGCGCGGGTCGATTCAAATTTTCACCCCGCGCCCCTGCTGTTTGCGTTTCTTTTCGTTGACTGGTATAGTAGGGAATGATATAATAGGATGATTATGACAAAAACTATGGTGGGAAGATCATATTATGTGGATTTCAAGTGACTGGAAGGACTATGAGCTGCTGGACTGCGGCGGCGGCGAGCGTCTGGAGCGCTGGGGCAAGTATCTGTTGGTGCGGCCCGATCCTCAGGCCATCTGGCGTCCGGAGGGGCGGCATCCCGGATGGCGGAGGCACGACGCCCGGTACCAGCGCGCCTCCACCGGAGGGGGCCAGTGGGTCAAGAAGGAACTGCCCCAGCGCTGGACATTGGGTTACAAGGGGCTGACCCTCAACATCAAGCCTATGAACTTCAAGCACACCGGCGTCTTTCCGGAGCAGGCGGCCAACTGGGATTTCGCCATGGAGCGCATCCGT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACCCCTCGCGGGGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [7,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACCTCTCGCGGGGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.90,-8.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [35.0-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.74,9.68 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //