Array 1 37071-35977 **** Predicted by CRISPRDetect 2.4 *** >NZ_MIXS01000039.1 Fructilactobacillus lindneri strain TMW 1.2006 seq5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 37070 36 100.0 30 .................................... TTATCAACATGACAAATTTGTACAATCGCA 37004 36 100.0 30 .................................... TTTTAACGATAAAAGTAAATTGGTTGTCCT 36938 36 100.0 30 .................................... GAAGCAATTCTATGATGTTTTGATCGCAGC 36872 36 100.0 30 .................................... CTTATACTGCTGAGGTTATCAAGTCCCCAG 36806 36 100.0 30 .................................... TATGCTAAAGCATACTCAAAGACTGCTGAT 36740 36 100.0 30 .................................... CCCTCAAGGGTCAAAGAATATTACAATTAA 36674 36 100.0 30 .................................... TGAATCAATTTGAATTCATTTACAAGATAC 36608 36 100.0 31 .................................... CTGATTGTTTTCCAATTCGACCAAGAAGTGG 36541 36 100.0 30 .................................... CCCTTAAATAATCTATGATGAATGTCCTTA 36475 36 100.0 30 .................................... TGAATTCGACCCATTTGTTGTTCCAGTAGG 36409 36 100.0 30 .................................... CAGCCACCAAATCATAATTCAGGTGGGAGC 36343 36 100.0 31 .................................... TAATGAACGTTTCATTAATTCATCAGCTTGT 36276 36 100.0 30 .................................... CTAACAGGATCTACAACAGCTTGACACATT 36210 36 100.0 30 .................................... TGGGCGGACAGCAATTTTAGTCCGGAGACG 36144 36 97.2 30 ................................T... TACGTTAACAACTAATGAAGCTATACGCAA 36078 36 100.0 30 .................................... AAATTAAGTAAAGAGATCAACTTACCGCAA 36012 36 94.4 0 .........T.........................T | ========== ====== ====== ====== ==================================== =============================== ================== 17 36 99.5 30 GTTTTAGAAGTACGTCATTCTAATGAGATTAAGAAC # Left flank : GTTATTTCTAATCCGAATTTGTTTTTACCATTCAAATTAAAATTAGAAAATTTAATTATTGAAGATTTAAATGAAAATGAAAGACAGAGACTTTTTCAATTGGACAGAGAAATTAAAAGTATTTTTTTAGGTGCTTCATATTTAGAAGATATTCCAATGTCGATTGACGAAGAGTGGAGTTTAAAAAAGCTGTATAAATACAGTGGAATCGACGTTTTGAAATCGGCAATCGATAATCCATATGATATAATTAAAGTAGTTCTTAATTCATATAAAAAGTTTTATCCTAAAAAACTAATTGTTCTTAATGTTTTATTTAATTATCTCGATTCCAGTCAAATTAGTAATTTGATTCAGATGATTAAAGATTTAGATTTGTATGTATTAATATTAAACTTTTCTAGTCAACCATATTCCAAGTTGTTTGAAAAGTGCCGTTATTACAGTGTTGATAGTGATTTTGTGAGATTTGATCGCTAGATAGGGTAATATTACAGACG # Right flank : TTACATTAAATTAACAATAATGTTTTTTCTATAAATGTTATAATTATATTATTAATCTTTGAATGTTACATCATTGATTAAAAAATCATCATTTAATTTAAGGAGCTTGAACATGTCTACTTTAACCACTATTGCTGGTATTTTAATCATACCGCTTTCATTTCGTTTATAGTTTGGTTAGTTAAGAAAGTTATGAAAAAAACAACTAAATATTCTGGCTGGTACGCCTTGATTGTAGGGATTGTTGGAATTATTATGTGGGTTATTGCAAATCCAATTTAAGTAGCGTTATTCATTTACGGTACACATTCTATTCTAGATGTGTATCGTATTTTTATTTGAAGATTAAAAATTAGGCACCCTTGAGCAAAGAACAAGAATCGTGTTTTATAAATATGGTATTCTAGTATAAATAAAAGTAGCTTATCACATAATGATAAATCCAAAAGGAGTTTTAAAAATGGCTGACAAACAATTTATTGCTAACAAAGTACTAGAAA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAAGTACGTCATTCTAATGAGATTAAGAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.40,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [90.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA //