Array 1 97633-93949 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAFCM010000009.1 Klebsiella pneumoniae strain 9-43 NODE_9_length_179585_cov_90.237599, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 97632 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 97573 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 97512 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 97451 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 97390 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 97329 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 97268 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 97207 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 97146 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 97085 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 97024 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 96963 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 96902 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 96841 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 96780 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 96719 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 96658 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 96597 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 96536 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 96475 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 96414 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 96353 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 96292 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 96231 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 96170 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 96109 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 96048 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 95987 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 95926 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 95865 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 95804 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 95743 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 95682 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 95621 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 95560 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 95499 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 95438 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 95377 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 95316 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 95255 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 95194 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 95133 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 95072 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 95011 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 94950 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 94889 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 94828 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 94767 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 94706 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 94645 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 94584 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 94523 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 94462 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 94401 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 94340 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 94279 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 94218 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 94157 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 94096 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 94035 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 93977 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 61 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [9-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-78.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //