Array 1 59028-54739 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAJGNM010000009.1 Pseudomonas aestusnigri strain FXH-240 NODE_9_length_133509_cov_205.459582, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 59027 28 100.0 32 ............................ TGTAGGAATTATCGACTTCAAATCTAGCGGCA 58967 28 100.0 32 ............................ AGACTTTGCGCGAGCTTCTTTTGCGTCAGCGT 58907 28 100.0 32 ............................ AGCAAAAGCTGGCATCAAAGCAGCCGCCGTCC 58847 28 100.0 32 ............................ AAAGCCATCTGCCTGCTACACCTCTGAGCGTA 58787 28 100.0 32 ............................ AGAGCCGTCACCGGAACCGTCATCACCGCCAC 58727 28 100.0 32 ............................ AAGAGTCCAAGGCAGCTCAAAGGAGCCCCATT 58667 28 100.0 32 ............................ TTGACCGTCTCGACAATCTCAATGCCGTCACG 58607 28 100.0 32 ............................ ATCAGGGCCACGATGTTTTTTTGATTTGTCAG 58547 28 100.0 32 ............................ AGCGTGCGCTGGTGGCGGCGCTCAAGCTCGTC 58487 28 100.0 32 ............................ TCGCTGCTCATCGTCAGCTCGGAGCGGGCATT 58427 28 100.0 32 ............................ AGTATTTCGAAGCGAGGTCCGTGGTCAATCGT 58367 28 100.0 32 ............................ AGAGGAACGAATCTGGACTTGTCGCCCTGGAA 58307 28 100.0 32 ............................ CGCGCAATGCAGTGTCCTGCGTCTCTGTAGAT 58247 28 100.0 32 ............................ TGAAATGAAAGCGACTGATCATCGTTAGTAAA 58187 28 100.0 32 ............................ ATCGCCAATCGAATCAACTCGCGCACCAACTG 58127 28 100.0 32 ............................ TCGGTGAGGCCGTGAGAGATAGGCCGCACCCA 58067 28 100.0 32 ............................ AGAGGTTGATGCCCGGGTGCTGGAGTCCTTCG 58007 28 100.0 32 ............................ AGCAGCAGGCTCACGCTGTGACAGGCGTTGAT 57947 28 100.0 32 ............................ TTATGCGATAGGTTGAAGCCCGCAGTGTCGAC 57887 28 100.0 32 ............................ TGAGTCGCGAAGGTCGCTCATGCGTGGCTTGG 57827 28 100.0 32 ............................ AAAAACCACCGCACCCAACTCGACCTACGCCA 57767 28 100.0 32 ............................ TGCTCGAACTCAGTGGGCTTGGTCGCGCCCAC 57707 28 100.0 32 ............................ GCTGGCTGCTGCTGTCACTGCTGATCCTGGCA 57647 28 100.0 32 ............................ AAAAGCCCTGGCCTAACCGCCGGGGTTTTTTT 57587 28 100.0 32 ............................ AGCATTCACCGCACCAGTCACCCATGGGGATC 57527 28 100.0 32 ............................ TCAGCGCTGAAGAGCGCCTGACTCAGGATGCG 57467 28 100.0 32 ............................ TGCTTGCGTGCGCTGTCCCAGTCGAACACCAG 57407 28 100.0 32 ............................ GCAGACATTACGCCAGTCGCCGCCTACCTGCG 57347 28 100.0 32 ............................ AAAGTAATCAGCCAGAGGCTTGACCACCTCGT 57287 28 100.0 32 ............................ TGCCGGCCTTGGGAGCCTTTTGCCGGCTTTCG 57227 28 100.0 32 ............................ CGGAACTGCAGCAGGCATGCGCCGGGGCGAGC 57167 28 100.0 32 ............................ TGCTGCTTGCGCAGGTGTGTCAGGGCCAGTTC 57107 28 100.0 32 ............................ TGAGCCGATCCACGCACCGATCACCCAGCACG 57047 28 100.0 32 ............................ TTACCAAAGCCCCACTTGGCAACGCCGGGCAG 56987 28 100.0 32 ............................ CGGTGCGCCGGGCGCTTTGATCTGATGCCGGA 56927 28 100.0 32 ............................ TGAGTCACGCCGAGCGGTCACAACAACCTGAC 56867 28 100.0 32 ............................ AGAGACTTCGCAGCAAAGCGCTTTGGAATCAT 56807 28 100.0 32 ............................ TTGTAGCGGATAGGCTCGTACAGCGGCGCCAG 56747 28 100.0 32 ............................ GAGATACGCGGATTGAACGGGACGCTGCTCCT 56687 28 100.0 32 ............................ TGCCCGCCCGGCTCTTTCATCCGTGAAACGGT 56627 28 100.0 32 ............................ CACGGGCTGATGGTTTCTGAGGCCGCCTGATC 56567 28 100.0 32 ............................ TTTGCCGTGCCATCGTTGGTCTCGATCGACAT 56507 28 100.0 32 ............................ CTGAACTTCCGCCAGCGCTCGGTCTTGTAGAA 56447 28 100.0 32 ............................ ATCCGCGGTGCTTTCGCGGTGGTACTCTGCGT 56387 28 100.0 32 ............................ AGGTCATCACACCTTACTTTGTCTAACCCAAC 56327 28 100.0 32 ............................ AGGATAGCGGCTACCAGGATAGCGGCTACCAG 56267 28 100.0 32 ............................ AGAGCGGGAGTACCGCTGGACGCATTCACCCC 56207 28 100.0 32 ............................ GTAGCGCTGTCTGCCGCTACCACCTTCAGCGT 56147 28 100.0 32 ............................ AAACGAAGCGCGGATCAGTGAAGGCAAGCCGG 56087 28 100.0 32 ............................ AGCTGCTGGCTGATGCGCCTGCGGTTGCTGCG 56027 28 100.0 32 ............................ GAAACGTAGGTAGAACACCCCTGCTGCCGGCC 55967 28 100.0 32 ............................ AAGAGCAAGGCTGCCAACAAGAAGGAGTCAAG 55907 28 100.0 32 ............................ ATGCTATGCAGCTCTTCAGCTGCCTCCAGGAT 55847 28 100.0 32 ............................ AGAAAGAGAAAGGCCCCTCAAGTGAGGGGCCA 55787 28 100.0 32 ............................ TGAAGAACGGCTGGGTTGTATCAAGCCGAGAC 55727 28 100.0 32 ............................ AGTACCTGTTCGCCTCGCCGACCGGCCTGGCT 55667 28 100.0 32 ............................ AGCTTGGACAGCTCCGCTGGCACCCTGATCGA 55607 28 100.0 32 ............................ TCACGCTGCCTAAGCAGCAACTCGCGCAAAGT 55547 28 100.0 33 ............................ GTCGTCTGCGGTGAGGCTTGGGCCGCTGGCGAT 55486 28 100.0 32 ............................ AATAAGCGCCCCCTTCCGACTCCAGAAGACCC 55426 28 100.0 32 ............................ CAAGGCTGGGACCGCGAGGACGTGTCGGTCAC 55366 28 100.0 32 ............................ AGATGCGCCGTGAGTGATTTCGAGCGAACGCA 55306 28 100.0 32 ............................ CCAGAGCTGGCGGGTGTAACCATCATCAACGC 55246 28 100.0 32 ............................ ATCATGGTTACGTTCACCTTCCCGCACACTCG 55186 28 100.0 32 ............................ AGAGAGCCAAAGTGCGCGGCCTTGTTGGCAGG 55126 28 100.0 32 ............................ TAGACCCGGAAGTTCACAAGGCGCTGAAGTTA 55066 28 100.0 32 ............................ GTAGCCAAACCAGTCATCCAGCTCTGCCCGTA 55006 28 100.0 32 ............................ ACCCGCATAAACACCGAGGCCGTCAACGAGGT 54946 28 100.0 32 ............................ GGGCCCTCGCACAGACCTAGGTGGAACGTGGC 54886 28 100.0 32 ............................ CGGAGACGATCAACAACGCAGCCAATGCCTAT 54826 28 100.0 32 ............................ ACATCCGGTCTTTGCAGGCTTGGCCGTAGTGG 54766 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 72 28 100.0 32 CTTCACTGCCGCACAGGCAGCTCAGAAA # Left flank : ACGGCTGAATGAGCACATGGCGCAGCAGTGGTTGCAGGGTATGCGCGATCACTTGGACATCTCCGACATTGCCCCTGTGCCCGAGACGGCCGGATACTGCCAGGTTCGTCGGGTGCAGGCAAAGTCCAGCTCGGAACGCCTGCAGCGGCGCTACCTGAAACGACACCCTGACGTTGACCAGAAGAGGGTGGCCGAGTTGTTTACGGCAGAGAAAGAGCGCCGACTGGCGCTGCCGTACCTGCGCATCAGAAGTGCCAGCTCGGACCAGCAGTTTCTTCTCTTTATTCAGCAGACGCCGGTAACAACGCCGCAAACAGGCGATTTCAATAGCTACGGCCTTAGCAGCACCGCCACGCTACCCTGGTTTTAACCCTTTATTTGGCGCTCTTTTGTATCGCCTTATAAATCAATTGGTTGGCGTTCGCTTCAAAAAAAGGGGCGAGCGCTAACCCGTTACTTCTGCTCTTTAAAAAACAATACCTTACGTGTCAGAATGCCTA # Right flank : ATGACAGGTGTCGTCGCGTAATGCTGTTCACTGAAGTGGAGCAGCTTTGCGGTTTGCCGGATAGCGGGTTTGGAAATCCTCGCCGTCCATAGTTTGCTGGCCCTGGACATATTTCCCAAATAGCGTCTTCGCGCACTTTCGGAGTTGTTGCCGGCTACAACACCAATGGATGCACGTGGCGATTACCCGTGAGCAGCAGCGCTTAGGGGTGGGCACGGCTGATACGCTGCGCTTACTCCTCCCTACAGGTAGACGCTGCCCGGCGGCAGGCTGACGTGGACACCCGTCATCCTTAAAATCTGCTTTTATTGTTACGTTATAACAATTATATTCTGCCCCCGCGGCGTGCCAGCCACGCCGTTGCCAATACCAAATCGAAAGGGAGCAGCCATGTTTTCAAGCAAGACGCCTTTGACTCTGGCGCTGGCGGCGGTGGCCGCTGGTGTCTCTACTGTGCAGGCAGCGGATACCGCTGTGGATTTGCCGACGCTGACGGTCAG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [45.0-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //