Array 1 1426533-1429952 **** Predicted by CRISPRDetect 2.4 *** >NZ_SDHZ01000002.1 Filimonas effusa strain TTM-71 NODE_2_length_1650484_cov_81, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== =============================== ================== 1426533 47 100.0 29 ............................................... GAGGTCCTGAATACGACCGGCGAAGACGG 1426609 47 100.0 30 ............................................... TAAGTCATTACACAATGAGTTAGAGCTTTT 1426686 47 100.0 30 ............................................... CTATAACGTTTACAGAATGTGTAAAATGAA 1426763 47 100.0 30 ............................................... TGTTCCATCGTTTACGTTTTGAAATTTCAT 1426840 47 100.0 29 ............................................... CCGCACTGGCATACCACCAGTTGATTTAG 1426916 47 100.0 30 ............................................... GAGGAGGTAAAATTCCCTATGCGGTGTGTA 1426993 47 100.0 30 ............................................... TTGGATGGCACACAGCATAAATGGTACTCA 1427070 47 100.0 29 ............................................... TGAAGGACATGCCTAAACCATCGAACCCA 1427146 47 100.0 30 ............................................... CTGCTATGGTATTGCTCATACAGCGCAGCC 1427223 47 100.0 29 ............................................... CGAGCAAACCTTTTCTTAATTGACTTACG 1427299 47 100.0 30 ............................................... GTGGGAACATAAGGCCTGTCTTCGGTTCTG 1427376 47 100.0 29 ............................................... ATTTTTACGGGCGTTTCTATTGTACTTGT 1427452 47 100.0 30 ............................................... GACCAAGGTTCCAGTATCTTTGACTTTCTT 1427529 47 100.0 29 ............................................... CCAAAGCGACATACCATTTATTATTAAAA 1427605 47 100.0 30 ............................................... CCATATTTAACAAAAGGTGTGCAGGTATAC 1427682 47 100.0 30 ............................................... TGTCTAATGTGAACCATTTGAAGTATGCAT 1427759 47 100.0 30 ............................................... CAGCGTGACGAAGACATGGAGTTAAAAGCG 1427836 47 100.0 30 ............................................... TAAAAGGAGCCCGCCTTATCCCTGTCCTGG 1427913 47 100.0 29 ............................................... GCCACCCTTATCATCCAGCAGCTCTTCCT 1427989 47 100.0 30 ............................................... AGATAGTTGTCGGGGAATATGTTCAATAAC 1428066 47 100.0 30 ............................................... CATAATGGCAAAAGCAAATTACAGCCTTTC 1428143 47 100.0 30 ............................................... CCCATAACTCAGGCTTTGGAACTTGTAAGG 1428220 47 100.0 30 ............................................... AAAAATTGAGATCCGAAAAAAGATACTTGG 1428297 47 100.0 30 ............................................... GTAATGAAATGCTTGATGCAATTGACCCTG 1428374 47 100.0 29 ............................................... ATGCAGGTCGCAGGTGATGAACACGATGT 1428450 47 100.0 30 ............................................... GGTTCCGTAAACTAATATTAACGAGTAAGT 1428527 47 100.0 30 ............................................... AACTATAGCTTTTCCTGCCTGCAAAACACT 1428604 47 100.0 29 ............................................... CGCTGCAATTCGCTGGCATTCATACCTAA 1428680 47 100.0 30 ............................................... TAAATGAGAGGCAATACGTCAGGACGTGGC 1428757 47 100.0 29 ............................................... AATAATGGGTATGTATACTGATTTTTGTA 1428833 47 100.0 29 ............................................... CCACTTGGAATAATAGTTATTTTTCTGCA 1428909 47 100.0 29 ............................................... TGAGCATCCTCGTTTAATTTTTCCAAGGC 1428985 47 100.0 29 ............................................... GATGAACTTCTTTTGATCCGTCTGCGTTC 1429061 47 100.0 30 ............................................... TAACCGTAACACCATCTCGCACCGTTACCA 1429138 47 100.0 29 ............................................... TTATAATGGAATAAATACTTTTACAAAAA 1429214 47 100.0 30 ............................................... TACATCTCAATGTTTCTCCCACTCATCTTG 1429291 47 100.0 30 ............................................... GCGGCATCCTTAGGCATATGAATAGAGGGA 1429368 47 100.0 30 ............................................... ATAACAGTCGATGGGAAGCAAATGACCTTA 1429445 47 100.0 29 ............................................... ATAATAAGCAGCGTCGTGATGCTCTCGCC 1429521 47 100.0 30 ............................................... GACAGCGAAGGTATTGGCCATTGTAAAGAA 1429598 47 100.0 30 ............................................... AAGTGTGAACAGCTTAAAGAATGGGCTGCT 1429675 47 95.7 30 ............T.......................C.......... GTCAAAGGCTTTTTTCCTTCTCACCTACCG 1429752 47 85.1 31 C...C....A.............TT.......G.........G.... TATAACCAAAGATTGCAGGATGAGTAGCAAA 1429830 47 97.9 30 .................A............................. CAATCCAGGGATGTTCCCTGCGTAAACTGT 1429907 46 78.7 0 C...C.-..................C....C.........C..GCTT | ========== ====== ====== ====== =============================================== =============================== ================== 45 47 99.1 30 GCTGTGAAAGAACTAATGTACATCATAAATTGAAAGTAAGTCACAAC # Left flank : GCCAAATGTTTTGAGGGAAAAGGCCGAAAGATATTATACCCGGTACTGGAGTAAAATCAGCCACCGCATGTATGTTTAACCGTTTAAACGCCTATCGTATTATGTGGGTACTCGTATTCTTTGACTTGCCCACTGAAACCAAAAAAGATCGCAAGCAATATGCTCTTTTCAGGAAAAGAGTACTGGCAGACGGTTTCCAGATGTTCCAGTTCAGTATGTATATCCGCCATTGCAGCAGCCGTGAAAATGCTGACGTTCACCTGAAGAGAATCAAAAGCATTTTACCTCCCAAAGGGCATGTTGGCATCATGTGCGTTACCGATAAACAATTTGGCATGATGGAAATTTTCCGGGGCCACGATTTGGTTAACGGCCCAGAAACAATTCAACAACTTGAGCTTTTTTAAGAAAACAGGAATAAAAAAATGTATTCAACTGGCATTTTTTTATTCCTGTTTTTCCATCTAATTATTTCAATAGCAGGAACTTATAAACTTCCT # Right flank : TTCTGTTATTTTGGAGTCCGTGAAGGAACTAATATATCGTATAAGTTAAGAAAGAACATAATACCTAAAGTCTCGAAAGAAATTAAAAACATAACATATTGCACCCAAAATAGCAAAACATACCGCATCTTTTTGCAAAAAAATCTAAACTTTAGAAGAAGTCTTATACTTACGCAAGCAATACAAATGGGGTTATACCCTTCCAAAAATCTACCACTCCGCCACAAACGAAGGCGAAAACTCCAGCGCATTTATATTATACTCCTCCATCACCGTCTTAAATGCTTCAGACACCACTATCCTGTTATCAAAAGAAGAGCGTACAATATGGTATTCAATTTCATACTCCTCCAATATGCCGTCAATGAGCGCTATCTTTTCAAAGTCGAAAGACTGGTCTACAGCACTTTTTTCATAAACAGATCTTTCAAGATCGTAGCAGGGAAGTTTAGTGTAAACATTCATAACGTAAAAACCTGTTGCAATATGTCCACGATATG # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTGTGAAAGAACTAATGTACATCATAAATTGAAAGTAAGTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:68.09%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.80,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-70.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.37 Confidence: HIGH] # Array family : NA //