Array 1 201660-202426 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAAQSW010000011.1 Klebsiella pneumoniae strain BA4439 11, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                          	Insertion/Deletion
==========	======	======	======	============================	=========================================	==================
    201660	    28	 100.0	    33	............................	TATCATCCCTATCGCGCAGCACTTCGACGGCGA        	
    201721	    28	 100.0	    33	............................	TACCGCCGCGATACTGGCAGTTTTCAGCTGAAT        	
    201782	    28	 100.0	    33	............................	CAGCGGCGGCGGTAACGCCGCCAGGAGCAACCT        	
    201843	    28	 100.0	    33	............................	CACCGATCTGCGCCAGCTGGGTGAGACGATGAC        	
    201904	    28	 100.0	    33	............................	TACACTCAAGAAAACAAAATCTCAGGTTGATAC        	
    201965	    28	  96.4	    33	......................G.....	TGGAAGGCGCGATTTGGAGATAGAGCAGCATGA        	
    202026	    28	 100.0	    33	............................	CTCGCACAGCATCGCCCGGATCCGCTTCCACGC        	
    202087	    28	 100.0	    33	............................	CACCCGCGTTTTCGAAAGGGATGGCGGCTATGT        	
    202148	    28	 100.0	    33	............................	CGACGGGGCAGGTTTACGTCTACCCGGGCAGGG        	
    202209	    28	  96.4	    33	.G..........................	CATACCAGTCTCCGCCGCGGTCGTACTCAATAT        	
    202270	    28	 100.0	    33	............................	TCCGCCGTTTAATCGCGGTGATGATATCCGGCA        	
    202331	    28	 100.0	    41	............................	TGGAATCCACGACGCGCCGTACCAGCGCGGGCATTCGTTCT	
    202400	    27	  85.7	     0	......A...T.T....-..........	|                                        	
==========	======	======	======	============================	=========================================	==================
        13	    28	  98.3	    34	GTCTTCCCCACGCACGTGGGGGTGTTTC	                                         	       

# Left flank :   TTTACAAAGAACGGCTCTGTATTGATTTGGCATTTTCACTCTCGAGGGAAATGGCGGGCCGCTACGATAAACACAAAGTCTCTGAGGCATTCAGAAAGCGAGTGATAGCCCTGGATTTGCTCAACCTGATTGCGGCCGATATCAATGAGCTGATGGGAGGGAAAGGTGCTCGTCGTACTGGCAAATGATCTGCCGCCAGCGGTCCGTGGACGAATGAAGCTGTGGTTTGTCGAACCACGGCCAAATGTTTTTGTCTCAGGCGTCAAAGATTCGGTCGCACAAACCGTTGTTGATTACCTGTTGCAGTACACGCCTGTGGAATCAGGCCTGATGCTGTTTCGCAGTATTCCTCAACCGCCTGGTTATGAAATTCGCTACAAGGGTGAGGTCAGAAAGCCGATTATTGATCTCAGTGGGTTACAGCTGATTATTGAAACCCTAAAACTGTCGTAATACGTGGATATTGTGGTTAAACTCTCGCTCTTTCACAATATGTTGGT
# Right flank :  TTGTGAGGGGTCTACCAGCATTGGCGTACTGGAGTCTTCCCTACACATGTGGGACTTAG

# Questionable array : NO	 Score: 6.17
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTCTTCCCCACGCACGTGGGGGTGTTTC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [2,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched GTCTTCCCCACGCACGTGGGGGTGTTTC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-11.50,-10.80] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [0-5] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: F [63.3-46.7]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [5.55,0.37   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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