Array 1 110405-114332 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJZWP010000005.1 Klebsiella pneumoniae isolate Prospectively collected (P), whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 110405 29 100.0 30 ............................. CTCACGCTGATACCTCGGAAAAAGACGGGC 110464 29 96.6 32 .G........................... GCGGGCTGGGTTTTGTCGACTCTGCCGATCCG 110525 29 100.0 32 ............................. TAATATTGATAAATTCGATGAAGTAACCGGAA 110586 29 96.6 32 ............................A TCGAAGTACCAGCGCCGCACCGTGTTTTTTGC 110647 29 100.0 32 ............................. GTGGCCGGTGCTGCCAGTACGGTTACCGAAGT 110708 29 100.0 32 ............................. CATCCACGCTTCTGGCCACCAGGCAGATAATC 110769 29 100.0 32 ............................. GTGCTCCTCTTCCAGATACTGGGCCAGGAGCT 110830 29 100.0 32 ............................. TACAGGACGACAGCATCCTGGAACATTTCGAC 110891 29 100.0 32 ............................. CTCTGCGTGTGCGCCTCCGCTACGAGGTGACG 110952 29 100.0 32 ............................. TGAATATTCATTTACTAAATTAGAGACAATTC 111013 29 100.0 32 ............................. CGGATTAAACGTAAGGCCGCGCGCTGGCGTAA 111074 29 100.0 32 ............................. GTGGTTTGTTACCGTGTTGTGTGGCAAAAAGC 111135 29 96.6 32 A............................ GAACGGAGGAATATAAGAACAAAAGCCCGCAG 111196 29 100.0 32 ............................. TAAACCGCTGGCGTGGTCAGTTGCGTGGCGGT 111257 29 100.0 32 ............................. GGCGCCGGCCTGATCACTATCGGGTAACGGTG 111318 29 100.0 32 ............................. GGCCTGAACCAGAGCATGATCTACACCTGGAA 111379 29 100.0 32 ............................. ATTGGGTAGAGCAGGCGAACGGATGTCTTTTT 111440 29 100.0 32 ............................. TTTTCACGGTCGAAGTTGTGCATGCTTTCTGC 111501 29 100.0 32 ............................. TCGACGCCCCGGTGTGGGAAGACTTTGGCACC 111562 29 100.0 32 ............................. CAGCGCATACGGGTTAAACCGGATCACCTCTT 111623 29 100.0 32 ............................. ACATAGCGCCCGATACGCAGCGCCAGCGGGTA 111684 29 100.0 32 ............................. GATCGATCGTTATTGTTGAACCGCACTATGGT 111745 29 100.0 32 ............................. CTTTTAATAATATCATCGGCAATGTCCTTATC 111806 29 100.0 32 ............................. CGGGACCGGATCCGCGTGGGCGACCAGGATTA 111867 29 100.0 32 ............................. CACCGATATTCAGTGCGCCAACGCCATAGCAA 111928 29 100.0 32 ............................. CCGAGGTTTTTCATACCTTCGGCAGTCGTAGA 111989 29 100.0 32 ............................. CGGAAATTTTGATTAGTTGAATCTGTGCCATT 112050 29 100.0 32 ............................. CCGACTTGGGACGAGGATCCGGCGGAATGTCG 112111 29 100.0 32 ............................. TAATGGCAAAACCATGACCTGATCCGGGCGTC 112172 29 100.0 32 ............................. CCTGAATCTTCACTTCGTCGATCATTCTGCGC 112233 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 112294 29 100.0 32 ............................. GTAACGCAGACGGCGAACGTCGGATCCATTGG 112355 29 100.0 32 ............................. GACCAGAAAGCCTGGGCATTGTTCCGCTCATT 112416 29 100.0 32 ............................. CCCCCGGCCGCGTGGCCGATTGCCATTACCGC 112477 29 100.0 32 ............................. TATACAGTATTATCATAGCGAATTCCCATCGG 112538 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 112599 29 100.0 32 ............................. GCACCAACGTTTACGGTGCGGTGGTGAAACAA 112660 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 112721 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 112782 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 112843 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 112904 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 112965 29 100.0 32 ............................. TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 113026 29 96.6 32 ........T.................... ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 113087 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 113148 29 100.0 32 ............................. CTGCAGGTAAATGACTGGATGGGGGAAGAGGT 113209 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 113270 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 113331 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 113392 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 113453 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 113514 29 100.0 32 ............................. TCCCCTACCACCCACTGAGCAAACTGGTAGCA 113575 29 100.0 32 ............................. CAGATACCAACGGTTACTACGGCAATCAGCAC 113636 29 100.0 32 ............................. AAGGTTGACCTGTTGTCGGCAACCATCGAGCC 113697 29 96.6 32 .........A................... GAGGCGCGCGTTGTCGTCGGTGAGATGCGCGA 113758 29 96.6 32 .....A....................... GCCATTCGTGCTTCTTCGCTTTGCTGCATCCA 113819 29 100.0 32 ............................. GAATATAAAACCAGATTCCATATAGCCCTGTG 113880 29 100.0 32 ............................. CCGGTTACGGGGATGACTGCAATTCGCTCCTG 113941 29 100.0 32 ............................. GGTCAAAAGGTTCATTCGAGCATCGAGTTGCA 114002 29 100.0 32 ............................. GCGGCGTCAGGTGTGTGGCAGAAAATTATTGC 114063 29 100.0 32 ............................. TCGTCTGAGTTCCGGCTTACGCCGTGCCGACA 114124 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 114185 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 114246 29 96.6 29 ............T................ GGGTTCACTTGGGTGAAACTGAACTAACT 114304 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================ ================== 65 29 99.3 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : AGGTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTA # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGATTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [78.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //