Array 1 801-1695 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JRMS02000012.1 Helicobacter sp. MIT 03-1614 NODE_12_length_52206_cov_66.6185, whole genome shotgun sequence		Array_Orientation: Unconfirmed

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
       801	    36	 100.0	    31	....................................	CTTTGCAAAACGGGTAAACGCCAATCTCCTA	
       868	    36	 100.0	    30	....................................	AAGGATAAGAATCTTACAAAGATTTATGAG 	
       934	    36	 100.0	    30	....................................	TGATTGTACATCTAACATTCCTAACTTTTC 	
      1000	    36	 100.0	    30	....................................	CTCAGACTGATTGTAATCAGCATTGCCTGA 	
      1066	    36	 100.0	    30	....................................	TTTATAGTTGTTGGGATTATGCTGATCTTA 	
      1132	    36	 100.0	    30	....................................	AATGAGATTGACCACTAACATTCACACTGC 	
      1198	    36	 100.0	    30	....................................	CTTATGATCATAAAAGGCATTCGACTATTG 	
      1264	    36	 100.0	    30	....................................	CTTTAACATTTAACACCTCACTTTACTAGC 	
      1330	    36	 100.0	    30	....................................	AAGGTTTATTTGCGGCAATATAACCAGCCG 	
      1396	    36	 100.0	    30	....................................	AAGAACTAAGATGAGAGGGAACTAAAGATT 	
      1462	    36	 100.0	    30	....................................	TATGTGCTTCCGCAATTGAACGAAATTTAA 	
      1528	    36	 100.0	    30	....................................	GAAAAGTTCTGGAACCATACTCACCACAAG 	
      1594	    36	 100.0	    30	....................................	ATTTAGCGGGAAATGCCGTTGTCCTAAATG 	
      1660	    36	 100.0	     0	....................................	|                              	
==========	======	======	======	====================================	===============================	==================
        14	    36	 100.0	    30	GTTTTAGCCGCTTATTAAATTCTTTTATGGTAAAAT	                               	       

# Left flank :   TTCCTTCATTATTTTTTGGATTCTCATTTTTTGTTTCTATGAAACTCTCCAATATTCTCTCTCAGTTTTTCTCCCGAGTTGAAGAAACCTTTGCCTACTTCATTCCAATACTCAAAGACCAAAATAATATTATTATAACCTGTATTTTTTCTTTATTGTAATAAAGCCAAGATAAAATCTGACATCCAATCGTAAAAAGCCATAGGATTATTTATACAATCTTTTGTGTGAAATAAAAAAGCATTTTGCATAATATCCATATAATCAATACAATAATCTTTTATATCCTTACCATTTATCTTGACATAAAAAGTATATTTACTTTCTTTTAGATTCTGTGGTATCTCACTTTCATTTTGTATGGTGTAGATTCCGTACTCCATAATCTCATCTTTAATATTTTGTTTTAACACTTTTTGTCCTTTATTTTGGTATCAAATGTATGAAATCATAATAATGATATGGCAAACCTTGTTAATGCTCAACATATCAAAGTATTA
# Right flank :  TACACTTTCTCAATTATCGTATTTTTCGGTATTTGAAAGACTTTAAATATCTTAGATGAGTGATTTTTAAGAAAATCTAAGATATAATCCTAACATAGAATTTAATAAGCGGCTAAAATAAGGAGTTTTCGGTCTCCGCAGGGTTACAATCCCTTTAAAACCGAGTTATCTTATTGATACATTACCTTTTAACAAATCTTTTTAAGAATCTAAGTATTTAGATCTCTATCCTTTAACCTAAAAAAGCGTAAGCTGTCTTGGTGCATTTGCTTTTTCATTCTCGCTTCTACTGCCTAGCAATAATCGCATATTATCAAATTGCTTTTCAGTAAGGATTAATGCCCTAATATGCCCTTTGGGAGGCACAATCAAACCCACCTTATCCAAATAATTATTGGCACTTGCTACACCTTTGCAGATTCTCATATACACGCTATATTGCAGCATCATAAAGCCATCTTTAATAAGATTCTTACGAAATCTCGCATAATCTTTACGCT

# Questionable array : NO	 Score: 3.26
# 	Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGCCGCTTATTAAATTCTTTTATGGTAAAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:75.00%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  NA [-0.90,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [73.3-73.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         NA [0,0   Confidence: NA] 

# Array family : NA
//