Array 1 103812-100432 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH993791.1 Streptomyces viridosporus T7A StrvirDRAFT_SVC.5, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 103811 29 100.0 32 ............................. TCATACGGGGACGGCTCGCCGTCGCGGTCCCG 103750 29 100.0 32 ............................. GTCGCCACCTCCCAAGAGCCCACGCAGGTGCC 103689 29 100.0 32 ............................. CGGGCGCGGCCCTGCTGCGCAAGCTCGAAGCG 103628 29 100.0 32 ............................. GTCACGTGACAGTGGCGCGGACGCTCGAGCAA 103567 29 100.0 32 ............................. ACCCCCGTGCTCGGGCAGCTGGCCGCCAATCC 103506 29 100.0 32 ............................. CGTGTCGGTAGAAACTGAAGGCATGTCGAAAC 103445 29 100.0 32 ............................. CGGTCCGGCCGCCCCTCCGGGAAGTGGACGAA 103384 29 100.0 32 ............................. TGGTTCACGAGGTTGTCGAGGGACTGACCGCA 103323 29 100.0 32 ............................. GCCGAACGCTGCCAGGATCTCGGCCTTGGCGG 103262 29 100.0 32 ............................. CCCGACGGCACCGGTGCGAGCGGCAACGTCTA 103201 29 100.0 32 ............................. CGCCGGCCCGGATACTGCTACGTCGTCTCTCC 103140 29 100.0 32 ............................. ACATCCCCTACGGGGCCCGGCCGGTGCTGCTG 103079 29 100.0 32 ............................. TTCACCAAGCACGGCAGCTTCAGCGCGAAGGA 103018 29 100.0 32 ............................. ATCCACGGTGACTGCCGCGAACGTCCTGGACC 102957 29 100.0 32 ............................. AAGCAGGTCCGGGACTGGGACAACGCCAGGCC 102896 29 100.0 32 ............................. TCCTGCGGCTCGGGAAGCAGTCCGGGATCTAC 102835 29 100.0 32 ............................. CGCACCGTCAAAATCACCGCCGACCTCGACGA 102774 29 100.0 32 ............................. CGGCCCATCACCGTTTCGGTCTCCGGGCCGGT 102713 29 100.0 32 ............................. ATCCGACAGGTGATGCGCAGGAACCCGGACGC 102652 29 100.0 32 ............................. GTCCGCCACCCGCGGCGGATCAGGGGGGTTAG 102591 29 100.0 32 ............................. GGAACGGAAGCGTCGGCATCTTGCCGGTCTGC 102530 29 100.0 32 ............................. ACCGCCACGGCCTCGGTCGCGAAGACCGTGAC 102469 29 100.0 32 ............................. ACGTACAAAAAGGGGCATTTCGGTCTGTTTCA 102408 29 100.0 32 ............................. CGGATCATCGGGACGTCGGCGCGGCCGTCGGC 102347 29 100.0 32 ............................. TACAGGGCGGATCGGACCGCGGCCCGCGCGCA 102286 29 100.0 32 ............................. GCGGCCGTAGATGTCGGGATGCCGGTCGGGAT 102225 29 100.0 32 ............................. GCCGCGGAGGCGAACGAGCGGGCCGCGCAGCA 102164 29 100.0 32 ............................. ATCGAAGCCATCCTGATCGGCTTGCTCTCCGT 102103 29 100.0 32 ............................. TGGACCGGATCGTCTCCGAGATCCGCAACAGT 102042 29 100.0 32 ............................. TCCCGGGCCCGGGCCGCACCGACCCGCAGCGT 101981 29 100.0 31 ............................. CTCCTCGAGGTCCAACTGGCATAGGGGGGCA 101921 29 100.0 32 ............................. ACACCCGCAGGCCGCGCCGCGGGACGCGCGGC 101860 29 100.0 32 ............................. GCATCGCCGCGGGTGGGCTGCTCGCCGGAGGC 101799 29 96.6 32 ...............A............. ACGAGCAGGCGCAGGAGACCGCCGAAGGTGCT 101738 29 100.0 32 ............................. GGATCGGTCACCGGGTGGCGCTACGACCCCTC 101677 29 100.0 32 ............................. CGGCGGGTGAATGTCCGCCGGGACACCATGGA 101616 29 100.0 32 ............................. AAGCGCCGGCTGACCGTGCGCGAGGTGTACGA 101555 29 100.0 32 ............................. ACTTTTCAGGCACTCGTGACGACGCTTCCGCT 101494 29 100.0 32 ............................. ACTTTTCAGGCACTCGTGACGACGCTTCCGCT 101433 29 100.0 32 ............................. ACGAAGGACCCCCGCGACCGAGCGACCGGTCC 101372 29 100.0 32 ............................. TCGACAGCGCGGGCACCGGCCGTCCGGTCCAG 101311 29 96.6 32 ...........G................. TCGACAGCGCGGGCACCGGCCGTCCGGTCCAG 101250 29 100.0 32 ............................. CGGTCAACTCCTCGGACACCGACCGGGCCAGC 101189 29 100.0 32 ............................. GAGCAAGCCAAGCAGGTCACCCAGCTCCTCGA 101128 29 100.0 32 ............................. GCCACCCGGCTCGAGGGCTTCCCCTCGCGGGC 101067 29 100.0 32 ............................. GTTGCTCGTGCCCAGAGTACGGAGCGGGACCG 101006 29 100.0 33 ............................. GCCTCCTCCTCGGCCTGGACCACGTCCTCGGGA 100944 29 100.0 32 ............................. GCATTGCACTATTGCCGTACCGAGGAAAGGGA 100883 29 100.0 32 ............................. GGCGTGAACAGCAGGTCCATGGTGCTCATCCC 100822 29 100.0 32 ............................. GACGGCCAGGTGCTGACGTTCCCCCACCCGCT 100761 29 96.6 32 ............................T TACGGCCCACGTAGACGTACCAGGGCACGCGG 100700 29 100.0 32 ............................. GCTCAGGCCGTCGACCGCCTCGCCGCCGAGAC 100639 29 100.0 32 ............................. GCGGCGCAGCAGTCGGGCGCTGTGCTCGGCGG 100578 29 96.6 32 ........................C.... GAGCTGCGGCCCGTCGCTCAGCGCAGGGTCAC 100517 29 100.0 26 ............................. AAGACCCGCAAGGTGAAGGGGAAGGG 100462 29 93.1 0 ..........................G.A | A,A [100435,100444] ========== ====== ====== ====== ============================= ================================= ================== 56 29 99.6 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : CGGCATCAACCACGACGGACCCGAGGACTACGGAGACGAGCTCTGGTGACCGTCATCGTCCTCACCAACTGCCCGGCCGGACTGCGCGGCTTCCTCACGCGCTGGCTGCTGGAGATCTCCGCCGGCGTGTTCGTGGGCAACCCCTCGGCCCGCATCCGCGACGTGCTCTGGGAAGAGGTCCAGCAGTACGCGGGACAGAGCCGCGCCCTGCTGGCCCACACCACGAACAACGAGCAGGGCTTCACCTTCCGCACCCACGACCACGCCTGGCACCCGACCGATCACGAGGGCGTCACCCTGATCCGCCGCCCCGACCCGAACGCCCCCACTCCCGGCCCGACTGCCCGGAACGGGCCGCCATCCGGCTGGAGCCGGGCTGCCAAACGCCGACGCTTCGGGAGAGGCTGATGCACATCGAGCCCTCTATGCCTCATTTGCCGGAATCAAAGAAAGTACTCGGAAACCGCCTCCGGCCCCAGTAAAGCTGCAGGTCATCCAGT # Right flank : TCGAAGAGGAACCGGATGATCAAGTGCACGGACTGCCCCCGCCTCCGCGAGACAGTCCCATTGCTCTCTGATCGTGATCAAGCAGAGCCATGTTCGCGAGAACGGTTGCTTGGTCCGGCGAATCGGTTCATGGACTCGGCCGACCCGGTCCCGAAGACGTACCCCCGAGGTCGCTCTCCTATCAACCGGGAGTGAACTCGTACTGCAACTCGTAGAGATGGCCCGCCTTGACCATGACAGTGGCTTCCACGGGGCGCTCGTCGTCGCTGTACACCACACGCAGGGTGCGGAGCACCGGAAGGTCGCTGGGCAGGGTCAGGGCCTGGTACTGCTCCTGGGTGGGAACTCTGGCCGAGACCCGGTCCACGCTCAGGCGAGGCGGAAAACCGAGTCGGCTCAGGAGTGTCGGTGTACCGCCCTTGATCTTCCGCTTGGCCATGAGGGCGGTGTCCCGGGCGATGGACATGGGGTAGTACGACTTGACCAGTTCGACCGGCTCA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,2] Score: 0.37/0.37 # Reference repeat match prediction: R [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-46.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 113544-115526 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH993791.1 Streptomyces viridosporus T7A StrvirDRAFT_SVC.5, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 113544 29 100.0 32 ............................. GAGCGGGCCGCGCAGCAGGTCAAGCAGGCGAA 113605 29 100.0 32 ............................. GCTCCGGGACGTCCTGTACTGCACCGAGCACA 113666 29 100.0 32 ............................. GCCTTCAGGCGGATCTCCAAGACCTCCTGGAC 113727 29 100.0 32 ............................. AACAACGGCTACATCCAGCTCGGACCCGGCGT 113788 29 100.0 32 ............................. TCCTCGTCGGGGACAAGACGGGCGAGGCAGTT 113849 29 100.0 32 ............................. TCCTCCGAAAAGAGCCCGAAGAACACCTCCGG 113910 29 100.0 32 ............................. TCCCTGGCCGCGAAGAGGAAACACGAGATGGG 113971 29 100.0 32 ............................. TGATCGCCGCCGCCGACCGGCTCGATGCCCTG 114032 29 100.0 32 ............................. CAGCCGCGGTAGCCCGGCCGCCGTCCCGTTGG 114093 29 96.6 33 ............................T CTCTGTTGTTTCTTTCCCAAGGTGTCCGGGGTT 114155 29 96.6 32 ............................T ACTTGCCGCGGCCCGGGTGCCGGGCGCCTTCT 114216 29 100.0 32 ............................. GACATGGGCCCGCTCATGGGCACGGCCAAGAC 114277 29 100.0 32 ............................. GGTGCCGTCATGCTCGGCTCCCGGTCGGTCGG 114338 29 100.0 32 ............................. GGCGGCACTCTGAAGTCTCCTGTGCTGGCAGA 114399 29 100.0 32 ............................. AACAACCAGGCCGAAGACTCGTTCCCCCTCAT 114460 29 100.0 32 ............................. TCGCCCAGCTGCGCGCCGAGCTGGACGAGTTC 114521 29 100.0 32 ............................. GCTGCCCGGTCCGTGGCGTACGCGCGGCGGGT 114582 29 100.0 32 ............................. TACTGCACGAACGCGTGGCTGGAGGCCGCGAT 114643 29 100.0 32 ............................. CGCGAGGGGTCGGCCGTACCGGGTGACCGTGA 114704 29 100.0 32 ............................. GGGGACGGCGTCGACTATGGGCTGACGTTTCA 114765 29 100.0 32 ............................. TATGCGATGGCCGGTCACGGCGGCTCCTCCTA 114826 29 100.0 32 ............................. GTCCCGGACACCTGCACGGACTGGGAGCTGCC 114887 29 100.0 32 ............................. GATCACGAACGCGCTCGACGCCTTGGCGCCGA 114948 29 100.0 32 ............................. GGTGACGTCCGGATCGGCGAGGGCGGCCGGCT 115009 29 96.6 32 .............T............... GGCCTGTTGCTCCCGGTCGACTCCTTGAGCTG 115070 29 100.0 32 ............................. GCCTGGGGGGCCGCGCTGCCGGTGGACCCCGA 115131 29 100.0 32 ............................. CAGGTGATCGGGCCGGTGTTCCGGTGGGACGA 115192 29 100.0 32 ............................. TCGGCGAGGCGGGCCCGGCCACCTCGGACGCC 115253 29 100.0 32 ............................. GACGCCCCGGGACGGGACTCCAACAAGTGCCC 115314 29 96.6 32 .....................G....... TCGCCGGGGCGATCCAGCAGTACGGCCGGGAC 115375 29 100.0 32 ............................. GCGGCAACGGTCGCGTTCCGGGAGGACGGACC 115436 29 96.6 32 .......T..................... GCGTCGATCCTTGCGGTGGGCCGGCCGACGGT 115497 29 89.7 0 .....T.TT.................... | T [115522] ========== ====== ====== ====== ============================= ================================= ================== 33 29 99.2 32 CTGCTCCCCGCACCCGCGGGGATGGTCCC # Left flank : AACGCCGGAGTGGCCTTGCCGATGTCGTGCACACCCGCGAGCCACACGGCGAGGGCACGTGCGTCCGACTCGCCCTGCGGCAGCGCCTCGGCCACCAGCATTCGCACCCCTACGGGCAGCCACCGGTCCCACAACAGGCCGGCCACCGCGGCGCTGTCCTCCATGTGCCGCCACAACGGCAGCCAGCCGTCGGTGTCACGGTCATGCTTGGCCCACACCGACCGAGCCGACTCCCCAAGTCGGCACAACAGGTCGGAACGAGGGCTCCCCCCATCGCTCATGAGTGATTGATACAGGGGGAGCCCGGCTCCGCACACCAAAACGAGCAAACGGAAGCGTTCGCAGGAAGACAGCACCCTCGCGACGTATCATGATCGGCTCGTTCTCGAGCCAATGAGAAGTACCTACAGACCAGGCGCCACCGAATGTCCCATTTGTCGGAATCTGTAAAAGTTGCTGAGAACACGTCTCTGCGGCCATAAACTCGCAGGTCAAAAAGT # Right flank : CAGCACAAGGACTATGCCCAGCGGAACCTCGTCTGCTCCCGCACCCGCAGGGAGTACGGGAGCTGAAGGGGACCACATTTGCCGGGAGCCGTGTGTGCAGCTCCGGCATGTCCGTCACGCGGCTGCCCGGACGTGGGGGGAGGGGAGAGAGCTGGGGGAAGGCGTCTTCCCCGCACGGTGCGCACGGTGCGCACCGTGCGACAGACAAGGGGGTCGTACGAGGTCATCCCGGGCCGGGCCACCGGGCCGAGCCAGGTGTGGTGGCAGCTCCACGGCACCGTGGGCAGGGCCGTGCAGTTCCTCCGGTGACTCCGGTGGACGTCGCCGGAACTTCCCCTGGTACAGGTGATCGACTGAAGCGGGAGCGTCGATCCAAGGTGTCCGGTTGTCCGTCGGTCGGTTCACGGGGACGGAGCCGGCCGTGAACCGACCGACGGAGCGGGTCTCAGCGGTCGGCCGCCAGGCCGAGGGCGATGTCGAGGATCATGTCCTCCTGGCCG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGCTCCCCGCACCCGCGGGGATGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched CTGCTCCCCGCACCCGCGGGGATGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [55.0-33.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //