Array 1 10279-8878 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATKH01000064.1 Fusobacterium hwasookii ChDC F206 Contig064, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================================= ================== 10278 36 100.0 38 .................................... TGATAATAATAATTATTTGTTTGATTCTGTAATTCATC 10204 36 100.0 41 .................................... TGTTTGAAATTTTTTCAATGCATGCATTTGAATTTTTTAAA 10127 36 100.0 37 .................................... TATCTAATAATTTCACTTGTAAAGTACCTTTTTTAAA 10054 36 100.0 37 .................................... AATTATCATTGTAAACAGTGAATTCTATATCCCTACT 9981 36 100.0 41 .................................... TTAGTTATTTCTTTCATATACTCATATCTATCAACAATTTC 9904 36 100.0 37 .................................... TGTGTCAGTTTAATTTTTATATTGTTTATGCCTTTTA 9831 36 100.0 38 .................................... CTAATATCCTAAAAGGATAAGTACAATTTATTTTTCGC 9757 36 100.0 42 .................................... TTTGCAACTTCTCGACTATCCGACCGACATTTTTTAACTTGT 9679 36 100.0 42 .................................... CTGATACCGTATTAAATGTACCTTTTTGGCTTTGTGCATAGT 9601 36 100.0 35 .................................... TTTCAACTTTCCAAAGCATACCTATTAAATTTTCA 9530 36 100.0 39 .................................... GCTTTGTTTTATTGCTAGTAACTCTTGTTCATTAACTGA 9455 36 100.0 44 .................................... GAGATATGGAATTGTCTTATCATAGCTTACATGATACTAGACAT 9375 36 97.2 42 ......G............................. TTTAAACTTTTATATTTTTATTTGGCGGAGAGTATAGGACTC 9297 36 97.2 39 ......G............................. AAATAGTTTTATTATTTATATCTATAATATTTTCTTTAA 9222 36 97.2 45 ......G............................. TCTATTGTTTGCCATAAGTATGCATCAAAGGTATTTTCTGTTACA 9141 36 94.4 37 .....TG............................. GATACTAACATAAATCACTAGCATCACCTTTTAAAAC 9068 36 94.4 38 .....TG............................. GCTTGTTATAGCCGTTTACTCTTCCCAACCTCCAAAAC 8994 36 94.4 45 ......G.......................A..... TCTTGTTTTTACAACTTTTTCTAACAACATTTCATTCATCACTCC 8913 36 75.0 0 ......G.....................TTCCTTTT | ========== ====== ====== ====== ==================================== ============================================= ================== 19 36 97.4 40 ATAAGAAAGAATATAACTCCGATAGGAGACGGAAAC # Left flank : | # Right flank : ATTGACAAAAAATCAATATATTTTTATAATATTAGTATAAGAAAATAAAAAGATAGAAAAGTCTAAAAACACTACCATGTTATAATATTTAATCAAGAATTTCTCACAATTGAAATTTTTATAGAAAGAAATAAAAACTATTTAAGGAGGAATTTTATGAAAAAATTATTATTTTTAACATTATTTGTAGGAATTTGTATAACTGGAGTAGCAAGTACAAAAGAAAAAAATCCAATTCTTATGAAACAAGTATTTAAAAAGGAAGAATTAATAATATTAGACAAAGAAAATGCAGCAGGAGGAAAAGGAACTTTAAAAGGAAAATTTGCTTTTACTAGAGATATGGCTACTGAAGATGAAGCTATCAAAGAAATAGGTTGGATGACACTAAACAAGGGAGAATCTGTAGGAGTACACCCTCATAAAAATAATGAAGATACTTATATTATCATTTCTGGAGAAGGAATATTTACTGATGGTTCTGGAAAAGAAACAGTTGT # Questionable array : NO Score: 3.13 # Score Detail : 1:0, 2:0, 3:0, 4:0.87, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAAGAAAGAATATAACTCCGATAGGAGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.30,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [88.3-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 1072-72 **** Predicted by CRISPRDetect 2.4 *** >NZ_ATKH01000065.1 Fusobacterium hwasookii ChDC F206 Contig065, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================== ================== 1071 36 100.0 39 .................................... TCTTTAAATTACCCATTTCATTTATAATAAGATTCTCAA 996 36 100.0 37 .................................... GATCACTTTCAAATCTCCATTCATCACGATCTCCATC 923 36 100.0 39 .................................... ACTTTATCCACATTTAAGCAAACATGAAAGACAACAATT 848 36 100.0 37 .................................... TCTAATAAGTCTGTTACTCCAAATTCCTCTTTACTTC 775 36 100.0 36 .................................... CTATTGGTAATGATGGTGAAAACAAAAACCTATTAC 703 36 100.0 41 .................................... TTTAAAAACAATACTCTATGTTTGTAAATAGCACAAAGCAT 626 36 100.0 37 .................................... TTATCTGTTGTATTATATGCTATATGCAATTTATAAC 553 36 100.0 35 .................................... TTAAAGCTTCATGACTATAGCCAAATTCATTCATT 482 36 100.0 40 .................................... TTTGTGTCAATCCATCCACCTAGAAAATCATTTTTTCCAA 406 36 100.0 35 .................................... CTTCAAATAATTTTACATCAGACATTTTTAATACC 335 36 100.0 42 .................................... ATAAATTACATTCGCTATCCCACAAACTCAATCTAACACCTT 257 36 100.0 37 .................................... GATACTAACATAAATCACTAGCATCACCTTTTAAGAT 184 36 100.0 41 .................................... AAACATAATATAGTTATTGGTATCCATCTCCAATCATTTGC 107 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ========================================== ================== 14 36 100.0 38 ATAAGAAAGAATATAACTCCGATAGGAGACGGAAAC # Left flank : GCCAATATATACAAATCAGTTTTAATCAGGTGATATTTATGGATAATTGGGATTTTTTAGATGAAGATTTTGAAAAGGAAGTTTTTGAAGATAACTTTACGGTTATCATAATTTATGATATTATATCTAACAAGAGAAGAACACAATTATCTAAACTTTTGAGTGCATTTGGATTTAGAATTCAAAAATCTGCATTTGAATGTCTTTTAACAAGAGAAAAATATAAATTACTCATTGAAAAGATTGATAGATATGCAAAACCAGAAGATTTAATAAGAATCTATAGATTAAATCAAAATGTAGTAACTCAAATTTATGGAGAAAAATTAGAAATTGAAAATGAGATGTACTACTTTTTCTAATGAAAAGTAGACGATATTATAAAAATGGGAAGTTCAATATGATTTTTGATAAAACAAAATATAAATTTTTAAAATTTAAAAAGTCACACGATAATAGCTTTATAAAATATTGCAAACAAAAGTTTTTTTGAGTATAGG # Right flank : CTTAAGACCGTCTAATCCTAATGTTCCAAATAATTTATGAATAAGAAAGAATATAACTCCGATAGGAGACGG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATAAGAAAGAATATAACTCCGATAGGAGACGGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.89%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-4.30,-5.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [71.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //