Array 1 274562-275383 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_CP065381.1 Faecalibacterium prausnitzii strain Fp1 chromosome, complete genome		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence             	Spacer_Sequence                   	Insertion/Deletion
==========	======	======	======	============================	==================================	==================
    274562	    28	  89.3	    33	............CA.........A....	TTCGTTGGCATCTCGGATGCGGGTGATGGTCTG 	
    274623	    28	 100.0	    33	............................	CACTCTGCAACTGCTCATACGCCTGCTGTTCGG 	
    274684	    28	  89.3	    33	............CAC.............	CGACTACAATCCGAACAAGGTCAGTGAGGAAAA 	
    274745	    28	 100.0	    33	............................	CTACGCCGGGGCCATCCTGACGCTGAACCCGGG 	
    274806	    28	 100.0	    33	............................	TGCCCCGACCGACCTGCGCGGGCGGCCCATCAA 	
    274867	    28	  89.3	    33	............CAC.............	CCTCGCCGTGTCCAGTGGCCCACCGCTCTTTAT 	
    274928	    28	  89.3	    34	............CAC.............	CCGTGCCAACACTCAGCCAAGAGTGGATGGGCGG	
    274990	    28	  92.9	    33	............CA..............	TATTCAGCAGACCCCTCCAGCACGGATTCCAGC 	
    275051	    28	  96.4	    33	.............A..............	CAACCCGATTGAAGTGCAGCAGCGACTTGACTT 	
    275112	    28	  92.9	    33	............CA..............	CCTCCACCATCGCTTTCTTGGTTTCGTCCGGGG 	
    275173	    28	 100.0	    33	............................	TAATAGAGCCGTTGGCTGGCTCGCCGGAAGAAT 	
    275234	    28	  89.3	    33	............CAC.............	CAGTCGGGAACGCTTCTCAGCAGAGCATCCCAT 	
    275295	    28	  92.9	    33	.............AC.............	CAAGCGGAAATCTATCCGCTCACAGGTGAGTGA 	
    275356	    28	  85.7	     0	...........A...........TC.A.	|                                 	
==========	======	======	======	============================	==================================	==================
        14	    28	  93.4	    33	CTTTTCCCCGCCTGTGCGGGGGTGATCC	                                  	       

# Left flank :   GCCGCCTCAGATGCCATTGTGGAATACGGCGCTCTCCGTGTGCGGGATGGTCAGCCTGCCGAAGAATTTTCGGCCCTTGTCCGGGGCACGGAACCTCTGCCGGATGTGGTGGCAAAGCTCACCGGCATCACGCCGGAGGAGCGGAGCGGCGGTATGGAGCCGCTGGCCGCGCTGGAGGCGTTCCTCGCATTCGTGGGCAAAGATACGCTGGTGGGCTATCACCTGAAATTTGACCTCGATTTCTTGCGTGCGGCCTGCATCCAGAATGACAGACCCCTGCTTACCAATCGCAGCATCGATGTTTTGCCCCTTGCCCGCCGTAAGGTGTCGGGGGTGATGAACTATAAGCTGCTCACGCTGGCCCGGCATTTTGAGGTTGCCCAGCAAGAGACCCATCGCGCCCTGCCCGACTGCCGCCTGATCCAGCAGGTCTATGCAAAACTGAATGAAACGGGATCGGCCCGCTGATAAAAATGCCGCTTCTATGGGATCTTTTTAGT
# Right flank :  CATTGACAACCCTGCGCAAAAAGCAGATAATAGGTTTATCTTGAATGCAAATGCAGAGCGAGGAAAAGTATATGCTGTATTTTGAAAACGATTACTGCGAGGGTGCACATCCGGCGATCTTACAGAAGCTGGTGGAGACCAACTTTGAAAAGGTCTCCGGCTACGGCACCGATCCCTATTGCGCCAGCGCACGGGAGAAGATCCGCGCGGCGTGCGGCGCACCGGATGCCGATGTCTGGTTCATTTCGGGCGGAACCCAGAGCAATGCCATCGTCATTGCATCGATGCTGCGCCGCTGGGAGGGTGTGCTGGCCGCATCCACCGGCCATGTGGCCGCTCACGAGGCCGGTGCCATCGAGTTCACGGGCCACAAGGTCATCGGCCTGCCGCACACCAACGGCAAGCTGGATGCCGGGACGGTTGAGGACTGGTGCAGGACCTTCTATGCCGATGGCAATGTGGACCACCTCGTGTTCCCGGGCATGGTGTACATCTCCCAC

# Questionable array : NO	 Score: 5.37
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.67, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.44,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     CTTTTCCCCGCCTGTGCGGGGGTGATCC
# Alternate repeat :   CTTTTCCCCGCCCACGCGGGGGTGATCC

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     R [1,8] Score: 0.37/0.37
# 	Reference repeat match prediction:         F [matched CTGTTCCCCGCACGTGCGGGGGTGATCC with 92% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-12.30,-12.20] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [6-12] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [55.0-60.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0.37   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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