Array 1 37060-42666 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAAGOH010000032.1 Ideonella sp. TBM-1 contig00032, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 37060 28 100.0 32 ............................ AGAAGGAGAAGGCGAGACGACGCGACCGGAAA 37120 28 100.0 32 ............................ GCCAACAGCGACGCGCCAAGCGCCTTCATCGC 37180 28 100.0 32 ............................ TGATCGGCCACCGCAGTGCCCGCAAACCATCC 37240 28 100.0 32 ............................ AGCAGCAGCACGCCTAGCAATGTGGTTACTGT 37300 28 100.0 32 ............................ TGGTGCGACGAGGAGACGGCAGCGGCTGAAGC 37360 28 100.0 32 ............................ GCTCAAGTGACGCTGGACGTTGTGGCCTGAAA 37420 28 100.0 32 ............................ TCCTGGCGGTTTTGTCTCTGGCTGCCGAGGTA 37480 28 100.0 32 ............................ TGTTCGTGCGGCTGGGGGTGGGCGGGGGACTC 37540 28 100.0 32 ............................ ACCAAGACCGGCGGTGTGCACACGCCCATCGC 37600 28 100.0 32 ............................ ACAGTGGCTTCACCGAGCACCAAGACCCCGGA 37660 28 100.0 32 ............................ GAGACCGGCGAGCGCGTGCAGGTGTTCACCGC 37720 28 100.0 32 ............................ TCTGTAAAACCCGCAGGACATATGCACCTATT 37780 28 100.0 32 ............................ TGGACGACGCAGGATGTTTCCGGGGTTTTCTC 37840 28 100.0 32 ............................ ATGGAGCTGCGCAGCCGCCAATACCCGTCTGT 37900 28 100.0 32 ............................ ATTTGTACCCCTTCCGATCGCTGGCGCGGATC 37960 28 100.0 32 ............................ ATGAAGCGATCCCGGCTGTAGACCGTGGCGAC 38020 28 100.0 32 ............................ TTGGGTGTACTCGGCATATTCCAGCGCGAGCT 38080 28 100.0 32 ............................ ACAGGGCCCATGCGAAGGCGCAGCCCAGGAGG 38140 28 100.0 32 ............................ TGTCAGAGCTGGCAGGGTCAGGGGCAGGCCCG 38200 28 100.0 32 ............................ ACCCGGCGGGCCATGTCGCGCAGGCTCACCTC 38260 28 100.0 32 ............................ TGCAGGTTCAGTCCAACGTGCAGGCCTGATGC 38320 28 100.0 32 ............................ TGGGGCAGGATGTGCTGCAAGTCGAGGTCGTC 38380 28 100.0 32 ............................ CTGGGGATTGAGTACGTCCTGCTGAGGGAGAA 38440 28 100.0 32 ............................ TTTGCCAAGCGCGTGCAGGGCCACATGGACAC 38500 28 100.0 32 ............................ TCGGCAATGAGCGTCAGCGATCCGGCGGCCAT 38560 28 100.0 32 ............................ ACGCTGATCCCCAGTGCCGTCAGCAGGTCGGC 38620 28 100.0 32 ............................ ACGAGATACGACCCGGCGGGACTAGTGCCGCC 38680 28 100.0 32 ............................ ACCCAGGCGCGCGCTGATGATCGACGGCAGCG 38740 28 100.0 32 ............................ GAGCGACGACTCGCCGCGGATCTCCACCACGC 38800 28 100.0 32 ............................ AGCTCCCGAAGCTTCATGCTTCGGACAGCTTC 38860 28 100.0 32 ............................ TGCGCCAGCAGCATGGGGATGAGTGGATCGAC 38920 28 100.0 32 ............................ ACGAGGGCGCGGACAGTGACGTTGTGGAATGG 38980 28 100.0 32 ............................ TGAAGGCGGGGGAGTTGGACGGTGGAGCGCTG 39040 28 100.0 32 ............................ ATGCTTGCGCGCTGGGCGCACGCGATGATGCG 39100 28 100.0 32 ............................ CACGCGCTCAGACCTCGTTCCTGCCGCGATCA 39160 28 100.0 32 ............................ ACTCCCGGCGCCGGACGGGAAGCCGGCACACC 39220 28 100.0 32 ............................ AGCAGCGCCATCAATTCCAGGGCGCTCAGGCG 39280 28 100.0 32 ............................ AGGTGGCCACCGCTGGCGGCGTGCTGCGCCTG 39340 28 100.0 32 ............................ TTTTCCGACACCGCCCCACGCGACCGTTTCGC 39400 28 100.0 32 ............................ TTTTGCCCGGGCCGCTGCGAGCTGTGCGGGCA 39460 28 100.0 32 ............................ GAAAAGTGCGGAGGCCAGAACGCTCTAGCCAA 39520 28 100.0 32 ............................ AACGAGATATTGAGCGAGTACGGCCTTCCTCC 39580 28 100.0 32 ............................ CGCTCAAGTCACCCTCGACGTGGTGGCCTGAC 39640 28 100.0 32 ............................ TTGACGCCCTTGTTGTAGGCGGCGCGGGCTTT 39700 28 100.0 32 ............................ CTCATGGATGGGCGCAGCGACATCTATGACCC 39760 28 100.0 32 ............................ TACGCTAGCGCTTACGGCGAGCGTGCGCTGAC 39820 28 100.0 32 ............................ CCACGGGGTGTCCTTCAACTTGATCACGTCAC 39880 28 100.0 32 ............................ ATCCGCGGCTTTTGGATCGGGGACGAATGGCT 39940 28 100.0 32 ............................ TAAGGCGGGTGGCATTGCCGATCGTGTCCTTA 40000 28 100.0 32 ............................ TTTCATCGGTCTAATTGCGTCGCTCACAAATT 40060 28 100.0 32 ............................ TATGACCCCGACCGGCGCGCGATGGCGGCGGC 40120 28 100.0 32 ............................ CTGCAGAACCGCGGCCCGCAGGCGCTCACCGC 40180 28 100.0 32 ............................ TGGTCGAGCAGGGTGGAGTTTTCGCCCACGGT 40240 28 100.0 32 ............................ TCCACGCCCATCGAGGACGTGCGCATGATGAA 40300 28 100.0 32 ............................ GTGCGCATGAAAACGCTGCGCGTGAAGATGGG 40360 28 100.0 32 ............................ ACCACGATGGGGCGGCCGGTGTGCGGCACTTC 40420 28 100.0 32 ............................ TGTGCAAAGCTGCCGTGGCGGGCGCTCCAGCC 40480 28 100.0 32 ............................ ACGACCTGCACTAGCAGAGATCGACGTCTTCG 40540 28 100.0 32 ............................ TCAGGTGCTGCGCACCTTGGCTCAAGGCTTCG 40600 28 100.0 32 ............................ TGAGACGTAATTGGAGCAACGCTCGCTGGTAC 40660 28 100.0 32 ............................ TCATCATGATTCGGAATGCCACAAAGCCGGAA 40720 28 100.0 32 ............................ ACGAATGACGCTCTGTCCAAGAGCCAGTTTGT 40780 28 100.0 32 ............................ TTCTGGGCTTTCCAGCGCCACGCGGGGCATGC 40840 28 100.0 32 ............................ GCCCGGTGAGCCTGTCCGCGGGACGTGCAGCC 40900 28 100.0 32 ............................ ACACTCGCGCCCGTCGCGCCGCCGGTGGAGAG 40960 28 100.0 32 ............................ CTGCGCACCGTCTGGGAGCCCTAAACCATGGC 41020 28 100.0 32 ............................ ATGAAGACTGCCTCGTGGGAGCGCAGCGCACT 41080 28 100.0 32 ............................ ATGAAGACTGCCTCGTGGGAGCGCAGCGCACT 41140 28 100.0 32 ............................ ATGCGCACCGAACAGGAGCCGGCTTTCCTCTG 41200 28 100.0 32 ............................ GCAATCGCCAATTGGGTCTGGTTCCACCCTCG 41260 28 100.0 32 ............................ AGGCAACGGCGACCACCTGCCGCTGATGTACC 41320 28 96.4 32 .......................G.... AGAGCACGGCGTTTCTGCCGAGCACATCGAGC 41380 28 100.0 32 ............................ ATCGCAACCCAACAGAAAGACGGAAATGCTTT 41440 28 100.0 32 ............................ TACGACCGCGGCCAGTTCAACCGCGACGAGAT 41500 28 100.0 32 ............................ ACACGTGGCCGCTATCGACAGTGGGCACAGGA 41560 28 100.0 32 ............................ TTCAGGTGCGCAGCACCTGGGCTGTAGCTGTT 41620 28 100.0 32 ............................ AGTGCGCGGGCCATCTCGTTGGTCACGTCGAT 41680 28 100.0 32 ............................ TTGGGAGTGGCGACGAACCTGCTGGGAACGCA 41740 28 100.0 32 ............................ ACAATCCAGCGCAGCAGCACAACACCCGTGCC 41800 28 100.0 32 ............................ TGGACGATTGCCGTGATCGCGGGATGCAGGAT 41860 28 100.0 32 ............................ TTCACCGTAGGGCGGGAATAGTCTGGCTGGGG 41920 28 100.0 32 ............................ TGACGGCGCCACGGTGACGCGAGAATTCCACG 41980 28 100.0 32 ............................ TGGGTCCAGATGCGCGAATCGCTCAGAGGGGT 42040 28 100.0 32 ............................ ACCAGCGCCTTGGCAAGGCTGCGCTCCAGGAC 42100 28 100.0 32 ............................ TTGTTCAGCAGTCCAGACGATGCAATCCGCGG 42160 28 100.0 32 ............................ AAGTGGCGCGCACCAGCTCCCCCGCATCCGCC 42220 28 100.0 32 ............................ TGACGGAGCCGCGTTTCCTGTCGCAGGGTTCG 42280 28 100.0 32 ............................ ACATGCGGCCCTCTTCAAGCGCCCGCTTCCAT 42340 28 100.0 32 ............................ TGCAGGAGCAGGACGAGCGCCGAGAGGCAGCG 42400 28 100.0 32 ............................ TCAGCGCCGTTGCGGGCGCGGAGGAACGCCAG 42460 28 100.0 32 ............................ AAGGTCCGAGCGATAGAGGAAGCCGACATTCT 42520 28 96.4 32 ..............G............. TCTGGCTCGACCACGCGCTCTTCAATGCTGAC 42580 28 100.0 32 ............................ TGGTGATCGCATCGCGGATCAGCCGACGATGA 42640 27 96.4 0 ........................-... | ========== ====== ====== ====== ============================ ================================ ================== 94 28 99.9 32 GTTCACTGCCGCACAGGCAGCTCAGAAA # Left flank : CTACCACCTGGCTGACTGGATTGCGAGATCACCTGCAACAGCCAAACCCGGACATCTTGCCGGTGCCGGGCAGTGTGGTGGCGCACCGCGTAGTGCAGCGGGTACAAGCCCAGAGCAACCCGAATCGGCTGCGCCGGCGTTGGTTGAAGCGTCATCCGGGCGAAGCCCCCGAAGTGGCAGAGGCAGCATTTCCTGCCGAAGCGGCAGAGAAGCTCGACCTGCCATTCATTCAGCTTCGCAGCCGCAGCACGGGACAGCCCTTTCCGCTGTTCGTGCGGCAGGTCGTCTCCGCAGCCAAACCGGGGACCTTCAATGCCTATGGCATGGGTTTGGACGGCTCCACCGTGCCTTGGTTCTGATCACCTGGCAGCCCAAAATTGCCGGCGCCACCCACGGTCCTTAAGAATCAATCACTTACGCCTGATCTGAAAATTTGGGTCTGATGGCGCCGTTCGGACAAAACTCTTTGACAATCAACGGTCTAGAAAAAGCCTCTTCTA # Right flank : AGTGGTGAGCCTGGGCTCTAGACTGAAGTGCAACACCTCAACTGGGTCAATGACTTGAAGCGATGGGCCAAGCATATTCAAGCCTGAGCATGGAGGAGCGCACGCAGATCAGCCTGCTGCTGAGCCAGGACGTCAAGCCCAGCGAGATCGCTCGGCAACTGGGCAGGTGCAGGGCCCGTTGGTCGCTTGTGGCGGGCAGTGTGCGGTGCGCGGCCTGTGGTGCGGAGAGCCGGTGTGGTGAACAGCGTTGTGGGTGGCGCGGCGGCCTTGTCCTTCATATACTGGCCCCCAGTACCTTGGAGGCCTTAGGCCATGCCCCACGCACCTGAAGACAAACGCAAGGCCTTGGCCCGCGTGCGCCGCATCCGCGGCCAGGCCGAGGCGCTGGAGCGCGCGCTGGAGGCTGGCGCAGATTGCGCGCCGGTGCTGCAGCAGTTGGCGGCCATTCGTGGCGCGGTCAATGGCCTGATGTCCGAGATCCTGGAGTCGCACATTCGTGA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [55.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //