Array 1 208721-213610 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP058321.1 Halomonas sp. SH5A2 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 208721 28 100.0 32 ............................ GCTCAGCTACTCGCCCAGATAGCTCAACTACG 208781 28 100.0 32 ............................ AATGACTCTTACGTGTGCCTTGCGTAAACCTA 208841 28 100.0 32 ............................ AGTTTCAGAATGGCGATGATGACGGACATATT 208901 28 100.0 32 ............................ TCGCGTATGTAATATTCCGCGTTAATTATACC 208961 28 100.0 32 ............................ TCATGCGCTGCCATCGATGTTCCGGCGTTTCC 209021 28 100.0 32 ............................ ATGAATGGGGCTATTTGCGTTGCGCTTAATAC 209081 28 100.0 32 ............................ GCCACCACCGGAAGGGTCGGAGTCATTACGTC 209141 28 100.0 32 ............................ ATCGTCGGGTGCTGGCGGAGAGTCCTCGTCTT 209201 28 100.0 32 ............................ ATATGATCACCTATTAGATTTGCGCTTACGGT 209261 28 100.0 32 ............................ AGGAGCGGATGCCTTTCTCTACTGAGCGGCCC 209321 28 100.0 32 ............................ TAAACCAATGCTGCCCGTCATTGATCGTGGCC 209381 28 100.0 32 ............................ GATAGCCCTCAACTTCCAGGGCGTAACGACCC 209441 28 100.0 32 ............................ AAAACACGAAGACTGGCCCGCCGATTATGAAG 209501 28 100.0 33 ............................ CTGAGACAGGGGCGGCACCATTCCTACGCCTCG 209562 28 100.0 32 ............................ AATACCCATGCTAGTCGTGCGTCGTTTGTGAT 209622 28 100.0 32 ............................ TTGAAGCCAACGCCTGGCTCACCTCGCGCCGC 209682 28 100.0 32 ............................ CGCCAGCCGAGCCAAGCGCAGAGGCCCTGGAG 209742 28 100.0 32 ............................ ACGACTGCGATAAAGACGATAGCGAGCTTGTC 209802 28 100.0 32 ............................ AATGCCCGCACCGGCGACCACACCAATGTTAA 209862 28 100.0 32 ............................ ATCTGCATAAGATCGGTGTTCATTGCCGCTGC 209922 28 100.0 32 ............................ GTGCCGGACCTGCGGTTCTACTGTCTACGTGC 209982 28 100.0 32 ............................ TCACCCTTAAGTTCGTCTAGCTGGCTGTGCAT 210042 28 100.0 32 ............................ GGATGCCGCCGCGGGGAGTTGCTTAACTTGGA 210102 28 100.0 32 ............................ TCAGTCGGCGGTGCCCGTGGCCACCTGGTAGC 210162 28 100.0 32 ............................ TGCTCACAGGCTCAGATGACGGAATGCGCAGG 210222 28 100.0 32 ............................ ATCTTCCAGCGACAGCACGCGATACTGGTATT 210282 28 100.0 32 ............................ GCGTGCGGGTGGTCAGCGATAACTCTGAAGAG 210342 28 100.0 32 ............................ TATGGAAAAAGCTAATTCTTTCTGATTTAGCC 210402 28 100.0 32 ............................ TAGCTGCTCAAGCGCTTCACGCGGGCGTTTTT 210462 28 100.0 32 ............................ TGTTGATCTAAATACAAACCGCTACTCAGCGG 210522 28 100.0 32 ............................ CTATGGTGAGGCTCCCGCGTCATTCTTCCCTT 210582 28 100.0 32 ............................ CGGCGATGTTGTCCAGCGTGGTTTCCAGCCAG 210642 28 100.0 32 ............................ TAAGAAAAATGGCGGAGGCATGAAACGGCAAA 210702 28 100.0 32 ............................ AACCGAGCAGCCACACAACGATGAATCTGGAA 210762 28 100.0 32 ............................ CACTTACCGGATGAAAGCCACGGCATGAGCCG 210822 28 100.0 32 ............................ AAGATGGTGATGCACTTAAAGAAAGGAAAGAA 210882 28 100.0 32 ............................ TTATAGGCTCATTCGTTGCAGCGCGTTTTCTC 210942 28 100.0 32 ............................ TGGAGAAGGAATGATCGATTCTTAAAGAACTG 211002 28 100.0 32 ............................ TGCCGACTTCCTTCCCGATGCCCACTCTCAGC 211062 28 100.0 32 ............................ GAGCGCGCCGAGCGAAACAGCGTGATTCAGAA 211122 28 100.0 33 ............................ AGATGCATGCGTTCATCCATAAGCTCGTAAAAC 211183 28 100.0 32 ............................ TAACCGCTTTCATGGGGGTGCGTCATGCGTAA 211243 28 100.0 32 ............................ TAGTACGCCGACATCACTGTTTCGAGGTTCAA 211303 28 100.0 32 ............................ GTGACCGGCAGGTACGACGCTTTGAACGTGTA 211363 28 100.0 32 ............................ AATGCATGGCGCGGATGGAAAGCGTCCTGTCC 211423 28 100.0 32 ............................ CTGATCGCCGCGATAGCTCGCCTTCCGACCAT 211483 28 100.0 32 ............................ GTATCTGGTCATACACAATGTCATCGCTGACC 211543 28 100.0 32 ............................ AGGGCCGATAGGTAGCGGGCTTCATCGAATGA 211603 28 100.0 32 ............................ AGCCTGCTGGCGGAATGTGCCGAACTTGCGTT 211663 28 100.0 32 ............................ ATCAACGAATGCACTGGCACTGTGAGAGTTGC 211723 28 100.0 32 ............................ AGCGGGTGCTGCTCAATAGCCTCCGCGATTTT 211783 28 100.0 32 ............................ ATTACGAAGACAAGGGAGCGGCTTGCTGGGCA 211843 28 100.0 32 ............................ CTGAGCACGACCCCATGCAGTACCGAGGAGGG 211903 28 100.0 32 ............................ TGGACGCCATACCGGATTGGAAAACACCAGCA 211963 28 100.0 32 ............................ TTCATCTTTCGCACGTCCAGAGGCACCGCTTG 212023 28 100.0 32 ............................ GCGCTCATCGAGGAGCAGCTGCACTTCGGTAA 212083 28 100.0 32 ............................ GGCTTGTGGCGTGCGATCCACACGCGGGTGAT 212143 28 100.0 32 ............................ TTCGCCCATACCGTTCGAGATCCGTCTCACCC 212203 28 100.0 32 ............................ CGCCGGAAATACTGTCGTCGCCCACCGTGGCT 212263 28 100.0 32 ............................ TGATCCATGCGTGACCGGCGAGCAAACCCTGA 212323 28 100.0 32 ............................ GCCAGTGCGGCCGGGAGATCCGCCACCGCCCA 212383 28 100.0 32 ............................ AATAAGGGTGACTCGGTTAACACCACGTGTTC 212443 28 96.4 32 ....................T....... AAAACCCTTTGGGAGCCTGAGCGCGCCCCTTA 212503 28 100.0 32 ............................ ATCACAAGCGAACTGCCTATGGCGGTCGCGTC 212563 28 100.0 32 ............................ AGAGTGCCTATGAATCTCAAGCGCTTTTATAT 212623 28 100.0 32 ............................ ACGAGCAGGAAGCGCTTGCGGGACTGTGCTAG 212683 28 89.3 32 ..TA.......................G TTGCCCCAGTCCTCCAGGAACTCACGCTGCCA 212743 28 89.3 32 ..TA.......................G TGAAGGTAACGCCGCTCAGCAGCCAGACGCTA 212803 28 92.9 32 ..TA........................ CCGGCAGCGTTATTGAGTGGCGCTCCGAAACT 212863 28 100.0 32 ............................ GTATCGCCCTGCTTTGATGCGGGCACCGCTTC 212923 28 92.9 32 ..TA........................ TGGCATCGTTTGTAGCGCGCCCGCCGATCAGC 212983 28 100.0 32 ............................ TGCATGCCTAGCTGCCCCAAGCCTATCGCCTG 213043 28 100.0 32 ............................ ATCTTCGGCTTGAGCGGCGGGAAAATGCCCAG 213103 28 100.0 32 ............................ AGCGGCCATACTCTGGACTATTACATCTGGAC 213163 28 100.0 32 ............................ CGCATTTCCGACCGCTACCAGTACGTGTGGAG 213223 28 96.4 32 .............T.............. AGCGTGATTGAGGTGCTGGCAGTGATCGTCAC 213283 28 100.0 32 ............................ ACTACGGCATCACTGACGGCTGGATGGATCGC 213343 28 100.0 32 ............................ GAGATAGTCCAGCAGTACGTGAAAAAGGGCTC 213403 28 100.0 32 ............................ ATGGATAAGCGACGCCTGCATGATGAATTGAC 213463 28 100.0 32 ............................ AAGAAAGACCAGGCGCAAATCCTGTTTCGTGA 213523 28 100.0 32 ............................ GAAAAGTGCCGAGCTACACATAAAAGAGAACG 213583 28 82.1 0 ......................ATTT.T | ========== ====== ====== ====== ============================ ================================= ================== 82 28 99.3 32 GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Left flank : CGCGTTTGCAGCAGCTAATGAGTGCAGGCTGGCTAACCGGTATGCGCGATCACACCCAGGTGAGCGAGGTGCTTCCGGTGCCTGCTGGTGCTCAACATATCAACGTGGCGCGTAAGCAGTTCAATACGGGCAGCCCAAGTCGTGCCAAGCGCTATGCCAAGCGGCATGACATCTCGGAAGACGAAGCGCAGCAGATTTACGCTAAGTTGGCCGAACGGCGTATTGAACTTCCCTTTGTGCAGATCAATAGCCGTTCCACCCAGCAACGTTTTAGCCTTTTTATTGAACATGGCAAACCTACCGCGTCTGCCACGGAAGGCACGTTCAGCCATTACGGCCTAAGCCCCAACGCCACGGTGCCCTGGTTTTGACCCTTTTTTTCAGCGATAAAATAGGCCACTAATAATCAATCACTTAGCGGTATTGCTCAAAAAAGGGTGATACCGCTTTTTTCGGCTAAAGCTCTTTAACAATCAGCACATTAATTTTGATAAGCTCTA # Right flank : TCGCCACTCAATTTTAAGATCCTTTTGAGATTGTGCGCAGTCGCGAAGGTAGAGATTGATGAGGCTCTGATACGGAAGGTCTTTTTCCTCGGCCAGATTCTTGAAATATGCAACGGTATCCTCATCCAGCCGGATCGTCACCTGCTTCTTGAGCTTCTTGGCGTATGGATTCTTAACGGATTCTGAAAAATCGTAATGATCACGCATGTCTATACCTCTCATAAGCCTTTCGTTCTCGTTTGTCCGCTTTCCGTGCAGAGATGATCCGAATGGTCTCACCGTCTCTAACGCAGTGGCATACCACCAGCAAACGAGAATGGATGCTCGTTCCGAGGAGTATGAACCGATCCTCCTCATCCGAATGGTCTGGGTCCGCTATTAAACGGCCGAACTCGTCTGTAAAGGCGGTTTTGGCCTCGTGGAACGAGACGGCATGCTTCCTGTGATTAGCGGCATCCTTGCGAGGATCCCATTCAAAGGTAAGATGGCTCATCAATTAC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCGCTGCCGCCCAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGCGCTGCCGCCCAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //