Array 1 3142514-3139864 **** Predicted by CRISPRDetect 2.4 *** >NZ_KQ089365.1 Klebsiella pneumoniae strain MGH89 aeurI-supercont1.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 3142513 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 3142452 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 3142391 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 3142330 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 3142268 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 3142207 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 3142146 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 3142085 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 3142024 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 3141963 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 3141902 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 3141841 29 100.0 32 ............................. GTAAATGGGAATGAGTAGAAGAGCGTCATTGG 3141780 29 100.0 32 ............................. CCCCCGCGCACATGCTTAAACGCGCTATCACG 3141719 29 100.0 32 ............................. GGCATCTGTTGTGTAATGTTGAGTTTTTTTCA 3141658 29 100.0 32 ............................. CAGGTTAAACATGTAAAAAATGACCGTCGCCG 3141597 29 100.0 32 ............................. CACATTGCCCGGTCTGAAAAGTATTTGAAAAT 3141536 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 3141475 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 3141414 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 3141353 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 3141292 29 100.0 32 ............................. GAACCTGAATTCGAAGGGTGGGTCATCCTTCC 3141231 29 100.0 32 ............................. GGACCCCGAGCGACCCGGTCACCCTCCGACCT 3141170 29 100.0 32 ............................. CCGTCGAACGGCGGTTATATCCATCTTGAGTC 3141109 29 100.0 32 ............................. ACCGATCCCACAATTGCGGCGGTTGAGATTGA 3141048 29 100.0 32 ............................. GTTGGTAATTACTGCTGTGTGTTACGGATAAA 3140987 29 100.0 32 ............................. CCGATTGTCTGGCGGTCGAGCGCCATTTGCTC 3140926 29 100.0 32 ............................. TGCCGGACGTTGTACCTGTGAGTTAATTCTTC 3140865 29 100.0 32 ............................. CGATAACCGGGCGTTTCGACTGAACTCACCTC 3140804 29 100.0 32 ............................. TTAATACCAGGGGGCAGGTTCAGCAGGTCCCC 3140743 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 3140682 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 3140621 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 3140560 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 3140499 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 3140438 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 3140377 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 3140316 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 3140255 29 100.0 32 ............................. GCAATCCCAGAGCGCGAATATCTTGGGCTCTC 3140194 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 3140133 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 3140072 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 3140011 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 3139950 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 3139892 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 44 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //