Array 1 4301545-4299810 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP024916.1 Klebsiella pneumoniae strain NH54 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 4301544 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 4301483 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 4301422 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 4301361 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 4301299 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 4301238 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 4301177 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 4301116 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 4301055 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 4300994 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 4300933 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 4300872 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 4300811 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 4300750 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 4300689 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 4300628 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 4300567 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 4300506 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 4300445 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 4300384 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 4300323 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 4300262 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 4300201 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 4300140 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 4300079 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 4300018 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 4299957 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 4299896 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 4299838 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 29 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : GTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //