Array 1 2127-2607 **** Predicted by CRISPRDetect 2.4 *** >NZ_QAXS01000041.1 Halanaerobium saccharolyticum strain WC1 Ga0213556_141, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================================ ================== 2127 37 100.0 35 ..................................... TTATTATAGGATTATACTTGACAAACCTTGAAATT 2199 37 100.0 35 ..................................... TTTCACTCTCTCCCTCATAATCTAATAGAGTGCAA 2271 37 100.0 36 ..................................... CCAACGTCAATATCATAGAAAGTTTTATTATACTCA 2344 37 100.0 36 ..................................... ATAGTTATCCACTCATCTCTGTTAGGTTCTTTCGAG 2417 37 100.0 44 ..................................... TTTGTTTTTCTAATTCTTTATAATTAATATTTAATAATCTTAAA 2498 37 100.0 36 ..................................... CCTCCTCTCATATCCATTACTGCTCCTATTTCTCCA 2571 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================================ ================== 7 37 100.0 37 GTTCCAGTGACTGATCCACTAAAATAAGGATTGAAAC # Left flank : TCTTAAAACGGTTAATTATTGGTAATATACTAAGTTTTGCTAAAGGGGTAGACTGGTGGATTGAAGAAGAAATAGTTGTAGAAGCAAAATTAGAGGAGGTGTCAGTTAAATTCAAAAATAAAGAGATGATTGGCTTTAAAGGTTATTTCTTCAGCAATATTTATCTACCTGAATTAATAGGATTAGGAAAATCTACTAGCAGAGGTTTTGGAACTATCAGTAGAGAAAAAATTCTTGATTAGGCTTGTTTTAAGACTAGAAATTTTATAAAATATAACTAAGAAAGAGTAAAAATTATAAATTCTGAGGCAAAATTATTTTTCTTGAAAAAACTGAACCTTGATAATCCAATAAATGGCAATTTGGTCAAAATGGTCAAAGTTGCGGGATTTGGTGTAAATTTAGATATTTTTCTAGATTTAATTGGGGATAAACCCTTTAAAAAATTCTAGGAGAAGTGCTTTAATGACTGTTATAAAAGTTAATTTAAACTATATCGG # Right flank : CTAAGTACTTATTGTATTCCATTTAAGGTCTTAAGGGTTCCAGTGACTGATCCACTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTTCCAGTGACTGATCCACTAAAATAAGGATTGAAACTAAGTACTTATTGTATTCCATTTAAGGTCTTAAGGGTTCCAGTGACTGATCCACTAAAATAAGGATTGAAACACGTTACCGTCCAGGAGAGTACCAACATCAGCCATGTTCCAGTGACTGATCCACTAAAATAAGGATTGAAACTCTCCTACCATAGCTTTTGGCCAGGCAACAATATTAGTTCCAGTGACTGATCCACTAAAATAAGGATTGAAACTTTGTAAAAGTTTCAGCTTGATCACCAGTTAAAGCTGTTCCAGTGACTGATCCACTAAAATAAGGATTGAAACTTACTGGAACAAAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAGTGACTGATCCACTAAAATAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.10,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : NA // Array 2 2838-4143 **** Predicted by CRISPRDetect 2.4 *** >NZ_QAXS01000041.1 Halanaerobium saccharolyticum strain WC1 Ga0213556_141, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================================================== ================== 2838 37 100.0 35 ..................................... ACGTTACCGTCCAGGAGAGTACCAACATCAGCCAT 2910 37 100.0 36 ..................................... TCTCCTACCATAGCTTTTGGCCAGGCAACAATATTA 2983 37 100.0 36 ..................................... TTTGTAAAAGTTTCAGCTTGATCACCAGTTAAAGCT 3056 37 100.0 35 ..................................... TTACTGGAACAAATTTTTTGAGCATACATTTATAA 3128 37 100.0 35 ..................................... TCCGCACATATTTCCAAAAAGTTGATGATCCCACA 3200 37 100.0 35 ..................................... TTATAGAGGAGGAGGAAGATAATGAACTACAAGAA 3272 37 100.0 35 ..................................... TAAGTACTTATTGTATTCCATTTAAGGTCTTAAGG 3344 37 100.0 35 ..................................... ACGTTACCGTCCAGGAGAGTACCAACATCAGCCAT 3416 37 100.0 34 ..................................... AAGCAGGTGTTGAATTAACATCAACCCCAAATTG 3487 37 100.0 36 ..................................... TATTCATTATTCCGTCTTCATCAGTCAGACCGTCTA 3560 37 100.0 39 ..................................... AATAATCTGCGTCATAAACTTCATTTTCATAAAAAGCCC 3636 37 100.0 70 ..................................... GCCATTGGTTCAGTATATTCCTTAATAATTCCTGAAGTTCCAATGAGTATATTCCTTAATAATTCCTGAA 3743 37 94.6 35 ......A..............G............... GCTACAAAAGGAGCGATCTGTCGTCCTCCTTTTCT 3815 37 89.2 36 ...T..A...T..........G............... TTGGACCGTTCTTCTGTTTCTGTAGCATTTTGCTGC 3888 37 100.0 36 ..................................... GCTGCACTTAATATACTTAACCCTAGCTTTGATGCA 3961 37 78.4 35 ..CAT.ACTG.A......................... ACAAACTGGTTAGAGTATTATAGCTGCATATTTCC 4033 37 73.0 36 A...T.ACTG.AA.....T.................T ATATAAGCCATTATTATCAGCTCTTCTTATTTGTTT A [4037] 4107 37 78.4 0 ..CATTA.T...............C......A..... | ========== ====== ====== ====== ===================================== ====================================================================== ================== 18 37 95.2 38 GTTCCAGTGACTGATCCACTAAAATAAGGATTGAAAC # Left flank : TACTCAGTTCCAGTGACTGATCCACTAAAATAAGGATTGAAACATAGTTATCCACTCATCTCTGTTAGGTTCTTTCGAGGTTCCAGTGACTGATCCACTAAAATAAGGATTGAAACTTTGTTTTTCTAATTCTTTATAATTAATATTTAATAATCTTAAAGTTCCAGTGACTGATCCACTAAAATAAGGATTGAAACCCTCCTCTCATATCCATTACTGCTCCTATTTCTCCAGTTCCAGTGACTGATCCACTAAAATAAGGATTGAAACTAAGTACTTATTGTATTCCATTTAAGGTCTTAAGGGTTCCAGTGACTGATCCACTAAANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGTTCCAGTGACTGATCCACTAAAATAAGGATTGAAACTAAGTACTTATTGTATTCCATTTAAGGTCTTAAGG # Right flank : CCAAATGTGTAATCAATTTAATTTTATTCAAATTTTAGATTGCATATAATTAAATCAGAAAATAATCAGATTTCAATTGGAGGGATAATCATGCTAAATAAAAGAAAAGATTTAATAAAAGCAGTCTTTATCGCAGACGCACTCTCATTCGGTTCCCACTGGGTTTACAGCACAGATAAATTACAAGAAGAATACAGCGGTATAATTGACGAATACAGATCTCCAATGGCTAAATTCCATCAGGGTAAAGAAGCCGGAGATTTATCTCACTATGGAGAACAGGCCTTTGCTTTACTGCAGTCTATATCGGATAATCAGGGCTTTGATTTAAAGAAGTTTAGAGATGACTGGGTTGATTATCTTGAAAATAATGAGATGTACATGGATAATGCAATGCAGGATTCGCTGGAAAAATTCAGAGATTCAAATACCCTAGTCGGAGCAGAAAATCATGAACTGGGAGGTATTGCCCGCAGTCTGCCTTTATTTTTAGAAGCGGA # Questionable array : NO Score: 5.88 # Score Detail : 1:0, 2:0, 3:3, 4:0.76, 5:0, 6:0.25, 7:-0.13, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAGTGACTGATCCACTAAAATAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.10,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-34] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [70.0-83.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA // Array 1 34882-34043 **** Predicted by CRISPRDetect 2.4 *** >NZ_QAXS01000032.1 Halanaerobium saccharolyticum strain WC1 Ga0213556_132, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 34881 37 94.6 39 ..........T.......T.................. TATCCTTCATAATATATAAGTTGCTGCTGTTATATCTGG 34805 37 94.6 35 ..........T.......T.................. GCATTGCAATTGAATGTTCCAATAATACTTTTATG 34733 37 94.6 35 ..........T.......T.................. TGACCAAACTTTTGATAGAGATTTAATTGCAGACT 34661 37 100.0 36 ..................................... TCCATCAACTCTTTTTCTAACTGGTCCCTTCTAGCT 34588 37 100.0 35 ..................................... TCCTCCTTAGCTGCATAAGCTATAATTGAATAACC 34516 37 100.0 36 ..................................... ACAATTGGGATACCATCGTAAGTATCAAATGTTCTA 34443 37 100.0 35 ..................................... TCATAATTATTTAATAATACTTTCCATTCTTCTTT 34371 37 100.0 35 ..................................... TATCTATAGAAGGTTGCGGTATCAATATCAGCAAA 34299 37 100.0 36 ..................................... TGATTAACAGTCCTAAAGTGTATGTATCCTCTACTA 34226 37 86.5 36 ..........T.......T..............TG.G ATATTACTTTTACCAATACCTGCGTGTCCTACTAAA 34153 36 83.8 37 ...A...C.A..-.....T..C............... TTTTCTCTGTCCCAAACAGCAATCTCAAATTCCAACA G [34150] 34079 37 83.8 0 ..........T..........C..........ATT.T | ========== ====== ====== ====== ===================================== ======================================= ================== 12 37 94.8 36 GTCTAATGACCAAGTCCACTAAAACAAGGATTGAAAC # Left flank : CATATGATGATTAAAAACTGGAACCAGCTTAGACCAGGAACTATAGTAGATATGTTTAATGCAATTTATTACAGTCCATTATTGATTGAAGATTTTTTAATTATAATAAAAGCTGATAATATGAATAAAAAAAATAAGGAAAGTGATATTCCATATGATGAAATTGCTAAACTATATGAGAATTACGTAGAGGAATTTGATAAATTGAAGGATAGAAATGCTCAATCTTTATTTATTGCAGGTGAAAAATAAAGGAATTTTAAGCTTGATATTCAAATATATATTAAGAGCTATTATTCATTCTGAGGCAAAATTATTTACCTTCAGAATCAAGAACCTTGATAATTATTGATATATCGGTTTGGTCAAGATGGTCAAAGTTGCGGCATTTGCTTAAAAGCAGTGCAATTTTTTGTAATTTTTAAGGGAAAATTGCCATCTTCTATTCTAAGCAAATGGATGTGATTACTGATATAATAGGGAATATGAAGTTTAACGGG # Right flank : CACTAGTTGCTATTAAGCAGCTAGATTTTTTATTTTCTATAAAAAAATTTTGCTTTTGCCAATATGTTGTCAAAGTCAGGTTGTATAATATTAATTGTAAGAAGCATTTTATAAAACTTGTTGCCACTTAAATGAAATTATTATCTGTTTTAACTAAAAGTTTAAGATAAAATGAGCATTTTCTAGCTAATTTTACAGGATAAATAATTTGGAGGTGGAAATATTAAAAAAATACTGAAAGTTTTAGATAGCATAGAACTTTTTTTAATGGCAAGAGTTCCTTCAGTCAGTTTTATCTTAGGTTTAGCAGCAGGAATTATCTCAATGGTGGTTTATATTAATTATTCTTTATCTATTTCTGTTATAGTTTTAGTTTTAAGTTTCACACTTTTTGAGCTTTATAAAAAATATTTTGCTGGTGAGCCTGATTTTATAATGCATTTTGATAATGAGAATCTTGAAGATGCAGAAGATTTCGAGAAACTTATTAGAGATGTTTT # Questionable array : NO Score: 5.88 # Score Detail : 1:0, 2:0, 3:3, 4:0.74, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.88, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAATGACCAAGTCCACTAAAACAAGGATTGAAAC # Alternate repeat : GTCTAATGACTAAGTCCATTAAAACAAGGATTGAAAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-3.70,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 1 4039-2316 **** Predicted by CRISPRDetect 2.4 *** >NZ_QAXS01000065.1 Halanaerobium saccharolyticum strain WC1 Ga0213556_165, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 4038 37 100.0 37 ..................................... CTACCTGTGGCTGCAGCAAACATAGCACCTAAAGTTC 3964 37 100.0 35 ..................................... AATTACCAACTGCTTGACTGACCAATTCTGTATCC 3892 37 100.0 37 ..................................... TATATATCGTGCCACGCTTCTTGTTCATCATCATCTA 3818 37 100.0 36 ..................................... TATTATTTTTGTGGTCTATCCAGACTTGATATCCGG 3745 37 100.0 37 ..................................... ATCAAAATGTTCAAAAATTTCAACAAACAATCTAGTC 3671 37 100.0 39 ..................................... AACTGTTTAGCATCTGAATTCCTATCTGACAAGTGAAGC 3595 37 100.0 35 ..................................... GCTTGATTCATTACGTCTTTATCGGTGGTCTTTTT 3523 37 100.0 37 ..................................... CATATTTTCATAGTTTCCTCCTTTTCTATTTAATTTT 3449 37 100.0 36 ..................................... GCTTCCTCAAGTGATATATTCTCATTACATAATCGC 3376 37 100.0 35 ..................................... ATTAATACTTTCATTTTATTCCTCCCTCAAATCTG 3304 37 100.0 36 ..................................... ATTCTTCTTCAATAGAAACTTTAAGCAATTTAATCA 3231 37 100.0 35 ..................................... AACATTCAAATAGACGGATATAAAATGCAAATCCT 3159 37 100.0 37 ..................................... TCAACCTTATTATAGTCTATTGATCCACTAACTTGGT 3085 37 100.0 36 ..................................... TGGACCTCAAAAACTCCAGTTATATTATTTTTGACA 3012 37 100.0 37 ..................................... ACGAAAAACTAGATAAGGATAAAAAAATTAACTTTGT 2938 37 100.0 35 ..................................... ATACAAGAATTAGAATATATGGCACCAAAGGAGGG 2866 37 100.0 36 ..................................... CATACCAAGAGGTACTCTTATTAGTTAGCAAAGCCA 2793 37 100.0 35 ..................................... TATGGGCGCCACAACAAGTCAAATAAGCGGATCTA 2721 37 100.0 36 ..................................... TTTTCATAACGGTAAAAAAGAATTAATCGGTAAATT 2648 37 100.0 35 ..................................... CTATCAGGAGAAATCGCTATTCCATCGGCGGTATA 2576 37 100.0 37 ..................................... AATCAGTTTCAGAAGTTTCTGGCTGTGAAGAAAATTG 2502 37 100.0 37 ..................................... TTTTTCCACTTCTCTAGCTTATCAACAAGGGATCACT 2428 37 100.0 39 ..................................... ACCGCTCTTTTTTCAGCCCACGCTTGTGACTTATAAATT 2352 37 78.4 0 ...........A......T..T..T......AATC.. | ========== ====== ====== ====== ===================================== ======================================= ================== 24 37 99.1 36 GTCTAATGACTGAGTCCACTACAACAAGGATTGAAAC # Left flank : GGGAATGAGAAAGAGTAATTAAACTTGAAAGGAGATTATATAATATGAGATTTTGGATTAGTTATATGATTGAATTACTTGAGGGGATTATCTTAATTGGAAAAGGAGTTTGTAAAGGTACTAAGATGTTATCACAAGGAGTTTTAAGTTTTATAAAGAATAATCAAAATTAAAATCTTGTAGTAATCTCATTTCTCTAAAATAGTTTAACTTTCAATTAAAATATATTTCTATGCTTGCAATTTGTTGGAACTGTCAGTTTATGCTATAATTAGATATAGAAAATACTTAGATTTTTAAATTCTGAGGCAAAATTATTTGGTCTCAAAAACTTGAACCTTGATAATCACTAATATAACAGTTTAGTCAAGATGGTCAAAGTTGCGGCATTTGCTTTAAAATTGGCTTTTTTAGCAGACTTTTATGCTAAAAATAGTGATCTTCTATTCTAAGAAAAGTGCCATAAAGACTGTTATAATAGTAATAATTGACTCTGACGG # Right flank : TACTAGTTGCTATTAAGCAGCTAGTTTTTTTATTATAACCAAAAATATTGAAGAGATTTCAAGTTTTTGATATACTATCCTAACACATAGGGCTCTCTTCACACTATCACTAAAGAGATCACTAATATTTTTTATGTTCTATTCTTTTATCTATTTCTTTTTTATATTCCCCCATAAGTAATTCTACCGCTCTTTTATTATCTCCATATTTTTTTGATAATAATTGATTAGTAAATACTAATAGGCCTTTAACAGCTTTGATGACTTCTTTTTTGGTATATCCCAAATCATTTATCATCATTTTTGCTGACATTAAATCGGCTTCCATCTCGATCTTCAAATCTCTTTCACTATTCATTTTAGCATGATCTAAAAAAAGATGATATGCTTCATGTCCAATCACAAAATCTTTTGTGCTCCCCTTTAAAATTGGATCTATTATAATTTCTTTTTTTGGCACTCTTAAAGCTCCTAATACAATCCCACGATATTCTAATAAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTAATGACTGAGTCCACTACAACAAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.40,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : NA // Array 1 1571-1977 **** Predicted by CRISPRDetect 2.4 *** >NZ_QAXS01000076.1 Halanaerobium saccharolyticum strain WC1 Ga0213556_176, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================= ================== 1571 37 100.0 36 ..................................... TCTACGAAATAACTTAACACCTCCTTCGAAAAATTA 1644 37 100.0 39 ..................................... GCAATTTTTTGATACAAGTCAAGGCTATCCAGTACAAAC 1720 37 100.0 34 ..................................... TCAGCTTCAAATGCTTCCTCATAGTTTGCTCTAA 1791 37 100.0 37 ..................................... AAATATTCAGGGTTATCAATATTCTCTTTAGTAACAT 1865 37 97.3 39 ..................C.................. ATTTTATTAAGAACTTTGAACCCTTTCTTTTCATGGGAT 1941 37 97.3 0 ..................C.................. | ========== ====== ====== ====== ===================================== ======================================= ================== 6 37 99.1 37 GTCAGAATAAACAGTCCATTACAACAAGGATTGCGAC # Left flank : ACGTTTCTCCCTATACTTTAAGGCACACCTATGGAGCTAAGTTGTATACTAACAATGAGGATTTAAGAAAAGTTAGAAGGAATTTAGGTCTATCTGATTCTAATCATCTTAAAATTTATTCTATACTTGCGGATCAGGATGTTGGATTTCTATATTAAATTTAAATTTTCCTGTATTTTCTTGCCATTAGAGTAATATAACGATATAATATGTTTAATAGTTATTAAACATTTGAACCTTTAAAAGTAAATAGTAGCAATAAATGTATTAAATTATTAATAATTATTCCTATCGCTGTCCTCTGAAAGGGTCAAAAACCCCCTAGGGTAGCGCAAATAGAGAATAACAGAGTATATGTGAGTATTCGATAGAATATGAGAGATAATTAAACTCTCATATATTTCCAATTTTGTCGAATCGGCTTGAAAAATTTGTCGAAAACAGAGGTTAGCGCAAATTGCAATTTCAGCCCTGTCATAACAAGCTTTGCAAGGGGTACT # Right flank : TTAGCAAGAGAAGAAAGTTCAAGATTTTCCTTATAGGTCAGAATAAACAGTCTGACCCTCCCCCAATTTGTAGGACACCGAGTTAAGATATATAATATAATCAGGAGGTGCCCGAAATGGGAAAAAGAAGAACTTACACAGAAGAAT # Questionable array : NO Score: 3.21 # Score Detail : 1:0, 2:0, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCAGAATAAACAGTCCATTACAACAAGGATTGCGAC # Alternate repeat : GTCAGAATAAACAGTCCACTACAACAAGGATTGCGAC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.80,-1.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [55.0-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //