Array 1 727-34 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNAA01000006.1 Exiguobacterium sp. AB2 contig00106, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 726 32 100.0 34 ................................ CGGCAAAGACGGCGATGTCGCCCGGACGTACTTG 660 32 100.0 34 ................................ CACTTGGTGACGCTGTTATAAATCCACAGCCGAC 594 32 100.0 33 ................................ GACGAACTGTGCGTGTTTGCCGTAATTGCCATA 529 32 100.0 34 ................................ AAGCGTCGCTTGATCGGGATGAACGACCGGTGAC 463 32 100.0 33 ................................ GTTTCTGAGTACGAACTTATTGAGCGTAGGCTC 398 32 100.0 33 ................................ TTTCAGTTTCGCGAAGTCCTTCGCCTTCAAGGC 333 32 100.0 35 ................................ ACGAACACGCCTTCTCGGATGGTGCCCTGCACGTC 266 32 100.0 33 ................................ TACGGTAGGTGCGCCGCCGTCTGACGCAATCAA 201 32 100.0 35 ................................ TACTTCCGTGATGAAGCGCTCAATGAACGCGTCAC 134 32 100.0 37 ................................ TTTTTGTAGTACCGTGTAATCCGCGCTTTCGGATGAC 65 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 11 32 100.0 34 ATCGCACTCTTCGTGAGTGCGTGGATTGAAAT # Left flank : GAGTGCGTGGATTGAAATTTTGTCGAAGTGGCGGAGTTCATCAAGGAGTTC # Right flank : TATTTTAATTAGCTCCCTTTAAATGTGATTTTCT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCACTCTTCGTGAGTGCGTGGATTGAAAT # Alternate repeat : AATCGCACTCTTCGTGAGTGCGTGGATTGAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.52%AT] # Reference repeat match prediction: R [matched GTCGCACTCTTCGTGAGTGCGTGGGTTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-5.70,-5.70] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-45.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,9 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 923-37 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNAA01000068.1 Exiguobacterium sp. AB2 contig00027, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 922 32 100.0 34 ................................ GCTTTTTTGAGCAAGGCCGGGCGATAAAGCTCCA 856 32 100.0 33 ................................ CGATACCAACACTCCATCGTGTTCGTGTCCGTG 791 32 100.0 35 ................................ CGGACAGGCTTACGTTTGGCGACCCATGCGGTACG 724 32 100.0 32 ................................ AGAACATCAGACTAATAATATCATCGCTCTCG 660 32 100.0 33 ................................ GGCAAGAGGGATACTGTCAATCGGGTTCGTGAG 595 32 100.0 35 ................................ CTCGTCCAAGTTTCCGGCGAGTAGGGCCTGTTGGT 528 32 100.0 34 ................................ TCTGCGTAGTATCTGCGTTAGTATCTGGTATTGC 462 32 100.0 34 ................................ CCCTCCGCTCCATTCATCCTAACCGCTAATCCCG 396 32 100.0 34 ................................ CAAGAGTGGCAAGGAACGTGATGGTCGGCTGTGG 330 32 100.0 33 ................................ GATTTGTTTCCGGCTGATCGCTACATTCGTGCT 265 32 100.0 34 ................................ CGGCACCATGTCGAGAAGCGCCTTACCGTAGCCC 199 32 100.0 33 ................................ TGCGCCGTCGACCAATGTGACGTCAGCCGTGAC 134 32 100.0 34 ................................ CGATGCAACCGCGCATAATCGTCATACACATCGC 68 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 14 32 100.0 34 ATCGCACTCTTCGTGAGTGCGTGGATTGAAAT # Left flank : CCTACTTTCTTGTATAAGTGAGGGGAATGTATGCTTGTATTAGTGACATACGACGTCAACACGATTTCACCTGGAGGCACGAAACGGCTCAGACAAGTCGCAAAAGTTTGTCAGCAATATGGTCAACGAGTCCAGAACAGTGTGTTTGAATGTATCGTTGATCAGACAGAATTTACAACTTTGAAATTACGATTGAAAGAAATTGTGGATGCGGATAAAGACAGTCTCCGATTTTATCGTTTAGGCAACCATCATGCCACTAAAGTGGAACATTATGGAACGAAAGAATCTTTAGATTTGGAAGGACCTCTCATTTTTTAAATGGGAAGTTGTTTTTAGTGAGTGCGAACATGTAGTGCACAGAATTTTCTAGAAAGGTTCGCACTCGATTCTTCGGTAATAGTCATCTAACTTGATAGTAAATCTAGTCGTTGTCATACTTAGATGGATAATATTGTTTGTTAGATTTATTTTAGGTGTTTTTTTAGTCGAAATTGGCT # Right flank : TGATGATACCGGCACCGTCCGCTGAATCAAACCCGAT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCACTCTTCGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTTCGTGAGTGCGTGGGTTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [26.7-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 586-33 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNAA01000072.1 Exiguobacterium sp. AB2 contig00109, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 585 32 100.0 32 ................................ TTCGTATCCGTTCAACTCTTTATCGCTCTTTG 521 32 100.0 33 ................................ TTCGTATCCGTTCAACTCTTTTATCGCTCTTTG 456 32 100.0 33 ................................ CAGGCGATTAGGAGGCACGGCAGCGAGCCAAAC 391 32 100.0 34 ................................ ATAGATACTATTCAAGTGACACTTAACCGCGAAT 325 32 100.0 33 ................................ TTCGTAACGTTCTAACTTGTGATCGTAGTATGA 260 32 100.0 34 ................................ TCCAAGCATCGCAGAAAGAATTCGAGTCGAAGGG 194 32 100.0 33 ................................ AAGTCGGGACGACCTCGATATCAACGAGTTCAT 129 32 100.0 33 ................................ CAGGACACGAGGCGCGGTTATAAGATGCACGGC 64 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ================================== ================== 9 32 100.0 33 ATCGCACTCTTCGTGAGTGCGTGGATTGAAAT # Left flank : GTGAGTGCGTGGATTGAAATGGCTTATAAGATAGTCAACGCCTGACGGCC # Right flank : TAAGATGTATCACGAGGACTGCATGAAGTTAGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCACTCTTCGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTTCGTGAGTGCGTGGGTTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [31.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 11731-9847 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNAA01000024.1 Exiguobacterium sp. AB2 contig00062, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 11730 32 100.0 34 ................................ ACCTCACGCTTGATGTCGTGGATCGTGAGCCCGC 11664 32 100.0 34 ................................ TTTGACGCTTTGTCCGCCAACTGAGCCGTAGTTT 11598 32 100.0 35 ................................ CGCAACGTCGATAAGCAACACGATTTTACCTCAAA 11531 32 100.0 34 ................................ TTCGGCCGGCTGGCAACAGAACTTGAACGCGGTC 11465 32 100.0 34 ................................ GAGCGCAACACGGCGAACCTGTTGGTCCGTCCGA 11399 32 100.0 33 ................................ AGCAGCCCACGCAGTACAAGGAATCGATGACGT 11334 32 100.0 33 ................................ TTCGGTGGTGGCGGCAATAATTCGGCAGGCGGC 11269 32 100.0 36 ................................ TGAAAGCAGGTAAAGCGCTATTCACAGGACTCAAGG 11201 32 100.0 34 ................................ AGTGATGTACCACCGGCGTGGGAAACTTGTCATT 11135 32 100.0 35 ................................ GATTAATACCGTCTGCACGCCCGGTAAGTTTAAGA 11068 32 100.0 35 ................................ TTTCGTGGTAGCTGATACGCGTAACGGCGCATCCG 11001 31 96.9 35 ..........................-..... ACGAATACAAAGTAACTTGCGACACACCACGTTAC 10935 32 100.0 34 ................................ ACCTCATACCCGAGCGCGTCTGCGAACGCGTCGA 10869 32 100.0 34 ................................ ATATGTTTATGTGCCGCCGTGTGTGACACGTATA 10803 32 100.0 35 ................................ GCGGACACCGGAGAGGGCATACTTGACAAGCTCAA 10736 32 100.0 34 ................................ CGCGATGCATACGTCCTCTTCGAGCGTCTGGATC 10670 32 100.0 34 ................................ CCCATCCCCTCCCAGCTCGTCATAGCACGCCTGG 10604 32 100.0 34 ................................ AACTTTGTGCGTAAAGCAAACTCAGCGGCGACCG 10538 32 100.0 34 ................................ TCGTTGAGTGGGACAAGCTCGATGGCTTCGATGT 10472 32 100.0 34 ................................ TCTAAGTACGTCAGCGACTTCCATCGTCGTGACC 10406 32 100.0 34 ................................ GTCGGCGGTGAGGTTGACATCACCATCGATTATG 10340 32 100.0 34 ................................ ATCTTCTCACGTCCGCTTTTGGCGCTCTCGCGTC 10274 32 100.0 35 ................................ GTTTTATCCTCTACCTTTTCCGTGAGCTCGGGAAA 10207 32 100.0 34 ................................ CAAAAATCGAACACTAAACAATGGTATCTGTTCG 10141 32 100.0 33 ................................ ATCTGCTCGAATATCGACAGCTCAATTGTGTTG 10076 32 93.8 33 G..................T............ GAGAACGCGAAGGACAACATCGACCGTATCGAC 10011 32 93.8 35 ..........A.........T........... TTCCCCTCTATGCATTAGGCAACACCTCCTTGGCT 9944 32 81.2 34 ..........A.A...T..AA........G.. ATCAACAAAAAAGACTGCTTGTTATCGGCCTTGT 9878 31 78.1 0 ...AT...T..-..AG...............C | G [9872] ========== ====== ====== ====== ================================ ==================================== ================== 29 32 98.1 34 ATCGCACTCTTCGTGAGTGCGTGGATTGAAAT # Left flank : GTGCGTGGATTGAAATTCGTGAACGGCGGGCTGAACAACATCGTGCCGG # Right flank : GGAAATAAAAAAAGCCGCTCTGAACTTAGTATTCAGAACAGCTTTTCATCATTAATTTGCTTGTTTCAACTCTTCAGCGGTTTCCGCTTGAACGTTAAATTTCTTAACATCAACCCGCTTCACAAAGAACGCGAGAATGAGCGCCAAAATGTTCATCCCTAAAGCGACATAGAACGAGACTTGAATCCCTGACAGAAGGGCTTGTTGTGTCAACGCACCCATCGCACTTTCTGAGAGTGTCGTTGGGTCGACGCCGCTCATGAGCGATTCGGCTTCGGTCCGTGTCACTGAGTTCATGATCGTCACCAAAACCGCTGTTCCGATTGCACCGGATACTTGTTGAGCCGTGTTGTTGATGGCCGTTCCGTGCGGGTTAAGATGCGTCGGCAATTGATTGAGACCATTAGTCATGACGGGCATCATGACCATCGACATCCCGAACATGCGGAGCGTATATGTCATGACGATATACGTGTACGTCGAATCGAGTTGGACGTGAG # Questionable array : NO Score: 9.16 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCACTCTTCGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTTCGTGAGTGCGTGGGTTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 1203-51 **** Predicted by CRISPRDetect 2.4 *** >NZ_JNAA01000083.1 Exiguobacterium sp. AB2 contig00100, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 1202 32 100.0 33 ................................ TCGTTGCCGTATTCGTCGGTACCAGGTAGCGGC 1137 32 100.0 34 ................................ AACACGATCCTCGAGTTCCTTGTCGCCTCGATAG 1071 32 100.0 34 ................................ TTGCTGTGGTGCTTCGACTTGTGGCGGAGCTTCG 1005 32 100.0 34 ................................ TCAACATATTGGAGGATCAAAAGTGAAAAACGAT 939 32 100.0 34 ................................ ACCTTGCGTCTCCACACCGGGACGCCCGTCTTTC 873 32 100.0 35 ................................ TAGGAGGACGAGACAATGATTTTATCAGAGCAGAC 806 32 100.0 35 ................................ ATCGAATGGCTGAAAACGTTCGTGCCAGCTGTCGA 739 32 100.0 34 ................................ AACCTATCGAAAGATAGTGTCTCTAAAATCAAAC 673 32 100.0 34 ................................ TCTGCCTCTTCGATGAACCGTTTGGATAGATGAG 607 32 100.0 33 ................................ TTGTAACGGTCGCCGCCCGACTTCGAATAACAG 542 32 100.0 36 ................................ ACACGTCAAATCCAAGCGTCCGGAACTGGCGCACTC 474 32 100.0 33 ................................ ATCAAATGTGAGGTCTACACCGAGCCGAACTTC 409 32 100.0 33 ................................ GTTCTGGCTCAATGACAAAAGTCGATGCGTGAT 344 32 100.0 33 ................................ CGATGGGACGTCAGACAAACAAATTGATGTAAA 279 32 100.0 34 ................................ TATTTCTTCGGTGTCGACGATCCGCTCAAACTCA 213 32 100.0 32 ................................ AATAATCTGCTTTACAAAAACCAACAATAACG 149 32 100.0 35 ................................ TCAACACCTACCTTCTTAATTTAAGTACAACTTAA 82 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 18 32 100.0 34 ATCGCACTCTTCGTGAGTGCGTGGATTGAAAT # Left flank : TGTCCCCTCATCGAGCGGGCGGATGACCA # Right flank : TTGCGTTTCCGAGCTGAACATATAGTTCGGCGAAAATCGCACTCTTCGTGA # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCGCACTCTTCGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTTCGTGAGTGCGTGGGTTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [43.3-18.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //