Array 1 71979-73200 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKRA01000015.1 Eubacterium ramulus strain BIOML-A3 scaffold15_size78782, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 71979 36 100.0 30 .................................... GAAGTTGACCTTGCGCATGAGTTCAACACA 72045 36 100.0 30 .................................... CCATGGATTGACATAAATCATGACATGCAC 72111 36 100.0 30 .................................... TTTTTAACACAAGCTTCTTCTAACTGACCT 72177 36 100.0 30 .................................... TAGCTTTTTCAATGTCATCAAAATAACACT 72243 36 100.0 30 .................................... AGTTTATGAAAAAATTATAACCGTAGATAC 72309 36 100.0 29 .................................... CTGCAATAGCTTTGTCCATTCTTTGTCCA 72374 36 100.0 30 .................................... GGATAAACTTCAATACCTTTTACCCATTTC 72440 36 100.0 30 .................................... TTTTTGTCGTGTGAAAATAGCTTCATCCCA 72506 36 100.0 30 .................................... CCGTGTCAGAATATAACCATCTCCGGCAGC 72572 36 100.0 30 .................................... CACGGTTGAAGGTATGTTCACGATCGTTTT 72638 36 100.0 30 .................................... AGCTAAACGCTTAGAATCAAAAGAATTATA 72704 36 100.0 31 .................................... GCCGCGGCTTCGTGTAGTCGGTTGCTTTTTG 72771 36 100.0 30 .................................... TGCTGTTGAGAAAGATGCACCTCCATTTGC 72837 36 100.0 29 .................................... CCTTTAACATTTTCTTTAAAATCACCTTT 72902 36 100.0 30 .................................... GATGGAACTTTGAATAATACCAAAGTTTCC 72968 36 100.0 30 .................................... TGTTCTTACACCACACGGAATGAGACAGCT 73034 36 100.0 30 .................................... CTAAAAGGCGTGATTGCCTATAGCATACGG 73100 36 100.0 29 .................................... TAGAAAAAGACGGCTGGATAAGTGAGTAC 73165 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== =============================== ================== 19 36 100.0 30 GTTTGAGAACCTTGTAAGTTTGTAATGGTGTAAAAC # Left flank : AATAAGAAAATACTGGGTAAGTTGTTTCAGGAATTGAAAACTGTTTCGATGGAAGATCAATATGCAGAAATATGTGAATTAAATACTAAAGTCGTTCATTATTTGGATGATTTAAATTTAAAAATACCCTATCCGATTCAATTTCGACTGGAGTTAGATGTACTTGATCTTTATAAAATATATGGGGTTCAGTTGGATACAGAAGAAATTGATATGTTTGAGCGGCTCTTGGAGTATGTCAAAGTACTGAAATCATTGTGCGGAGTTGGCTTACTGGTATTTGTAAATGTGAAAAATTATTTGTCAGAAATGCAGATAAAAGAATTGTACAAAACAGCATTTTATTATAAAATGAATTTATTATTAGTTGAGGCACATCAAGGGAAAGTTTTAGAATGTGAAAAAAATCAATTAGTAGATGAAGACATGTGTTTTATACATTACTAGGTGGCTTACGCATATTGACCGATATGTTCGGTTCGGTGATGATCTTATTTGAG # Right flank : CTTTCATTTCAAGCTTTTTAAATTTGTCATTGTTTGAGAAGGTGCGTTACATCAATCTGCTAACCAGCGGCAAACTGAACAGTTATCTTGCTGACATTGATCGGCAGGCAGAAGCAATGTTTTCTCGGCTGGTAAAATAGCTTTCCGAAAAAGAGGGCGTAACGGAAGCCCTCTTTTTCGGAAAATCAAATGCTGTGGGTGCAGAGGATGAACAACATCCGCAGTGTTGCTATGGAAATCGTTTCGAGTGAGCTTATATACTGTTAATACTATGCAAGAAAAGTCGCTGTCAACAGACGGCGGCTTTTCCTTTTCGGGTAGTATTCAAGAAGTCATAAAGTTCTGTGAGTAATGGAAGAAGCCGGCGTTTGCGGAAAAGTCACAATTTACGGAGGTAAAGCTTCAAATACACTTGCCTTTTTGTTCTCACTATGATATTATTAGTACACATACTAAAACATTTGATGGGAGGTGATGTATTTGCGGAGAGATAGCAGTGA # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAACCTTGTAAGTTTGTAATGGTGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.30,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0.27 Confidence: LOW] # Array family : NA // Array 1 82161-82534 **** Predicted by CRISPRDetect 2.4 *** >NZ_WKRA01000008.1 Eubacterium ramulus strain BIOML-A3 scaffold8_size104857, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 82161 32 100.0 37 ................................ GTATACCAGTCCTGTGTAGCCGAAGTTTACAGCACCG 82230 32 100.0 37 ................................ ATTGTACAGTCCTGTGTAACCAAAGTTAATCTGGCTG 82299 32 93.8 37 .....................T....A..... ATATACCAGTCCTGTGCGTACAAATGTGATGGTGCTG 82368 32 93.8 30 ..T....................T........ AGACCAGTGTATGCAAATGTGATGGTTCCA TACT [82389] 82434 32 93.8 37 ..........................CT.... ATTGTACAGACCTGTGTAACCAAAATTGATATTGCCA 82503 32 96.9 0 .....................T.......... | ========== ====== ====== ====== ================================ ===================================== ================== 6 32 96.4 36 TTCTCTACATACCACCAGCCACAGTTGCTGTC # Left flank : TTCTGCCTGATTGGCGGAATCACCTGCATTAATATTTGCATTTCCGATATTCGCCAGCTGATCCATGTCCATATCCAGCGTAGAGGAAAGCAGATACATCCGTGATGCATCCGCACGGTTCCTGTCCATGGGATTTTCCGGGGCTGTCTTTCCAAAAGAAATCATCAGCGCCAGAAACAGAGCCACAATTCCGGCTCCCGCCAGTGCTCCTGTTATTTTCTTTTTATTTTTTCTGTTTCTACTTCCCGGTCTGTTCATGAAATTCCCCTGTTTTTTTTGACAAAAGCAGGTTTGTTCCGGTTGCAAAGTCCGAAACAAACCTGTTTTTTACTTCCTTGTGTCCATCTAAATGATGTGTATGCAATAATTGTCAGATAATTATTCGCAATCTGCCAACGCTACTTGCTTATTCACGTTAGAATCTGACTGCTCCTCCAACTACATTCCATACACCGTATGCATTTCTTACAGTTCCTGTATACCCAAAGTTGATGGCACCG # Right flank : CATATACCAGACCTGTGTAGCCATAGTCGATGGTTCCGCCAACCACATACCACCAGCCATACTCACACTCAGCGAGCCCTGTGTAATCAAAATCTACCGCACCGTCTTTGATGTACCACCAGCCGCATACACTGTCATTGTACAGACCTGTGTACTCAGCATCTACTTTGCCGGCTTTGACATAATGCCATCCGTAAACAGCATCGTTGTAAAGTCCGTTGTAAGTAGTATCTACTTCACCGTCTTTTAAGTAATAGAGACCGTCTTCTCTCTCCTGAAGACCTGTAAACTCTCTTGCTTTATCTCTGGTTGTTACATGTGCAGTCAGATCAACCGGAGCTGTGCTCTCATTGCCGTCCGTGAAATACAGACCTTTGATCGCTACTTCTACCGGATCATCTACATATTTTAATACTTTAAATTTTAATGCAAACGTTGCTTCCGAGAAGGTAGTATCTTTTGCAGATGTCAGGTAAGAGAAATTTCCTCCCGCAGTGGAT # Questionable array : NO Score: 2.57 # Score Detail : 1:0, 2:0, 3:0, 4:0.82, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCTCTACATACCACCAGCCACAGTTGCTGTC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [7,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.30,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0.37 Confidence: MEDIUM] # Array family : NA //