Array 1 14729-17809 **** Predicted by CRISPRDetect 2.4 *** >NZ_UJFG01000009.1 Klebsiella pneumoniae strain EuSCAPE_RO075, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 14729 29 100.0 32 ............................. TTGACCTCGCCGCTTCCGGCGTCGCCTACAAA 14790 29 100.0 33 ............................. TGCATCAGGAGTGTTGGATACTCAATTCCAGGC 14852 29 100.0 32 ............................. CCTACAGTCACAGCAGGCGGCCAGCACGTGGG 14913 29 100.0 32 ............................. CTCCGGGCGAATTTCGCGCCCGTCTACCGTCG 14974 29 100.0 32 ............................. TCGGAGATCAGCACCGACCACCACAACACCCC 15035 29 100.0 32 ............................. CACCACCATCATTAACCCCTGAAGAAGTGGGA 15096 29 100.0 32 ............................. TGTTACTAACCCTTCATGTGTGATACTTTCTA 15157 29 100.0 32 ............................. ATTTCTTCACCTGCATAGAGCAGTTGCGCCAT 15218 29 100.0 32 ............................. GCACCGTGGCCGCTGGCGACGATTACAGGATA 15279 29 100.0 32 ............................. TAGAGAATGCAGCCCGCGTGAGATCCATTGTC 15340 29 100.0 32 ............................. TGACGACACCTGACTGGTGCAGCGCCCGGTCA 15401 29 100.0 32 ............................. GGCAAGACGCGCAAAAAGAAAAATCATTTCAG 15462 29 100.0 32 ............................. GTGATCGGCCCGGCAATGCGTGAGCTAATCAA 15523 29 100.0 32 ............................. TTGAGTGACAGAGAGATTGACCGCCTTGTTTT 15584 29 100.0 32 ............................. CGTTTAACGCAGTGCGAAAAATTACGACACCA 15645 29 100.0 32 ............................. AACTGAATGTTCCAAATCCGGTTGGACGACCA 15706 29 100.0 32 ............................. TTCAGCAGCGCGCTCGTCCCCCTCCTGTCGGA 15767 29 100.0 32 ............................. CTCTACTACGATAACGGATCCCACGCGGGCTG 15828 29 100.0 32 ............................. GCTGCCAGCCCATTCCGTAATTGCCTGTTTCA 15889 29 100.0 32 ............................. TTTCTGCAAATCGAGTTGCCAGCGCGCCACGC 15950 29 100.0 32 ............................. GTGGAAATCAATTTTTGTTTTGGCCAGCGCGC 16011 29 100.0 32 ............................. GCCTCCTCCCGTTACACGGACGGCATTGACCC 16072 29 100.0 32 ............................. AGATTGAGCCATATCTATCACCGCCTTCGCCA 16133 29 100.0 32 ............................. ACCGGGCATTAAATTTGGTCTTCTCGTCCACG 16194 29 100.0 32 ............................. GCTGGCCGGAGTGTCGGTCATCGCCAGCCCCA 16255 29 100.0 32 ............................. AACAAACCGATCGCTCGATCAATCGCGTTAAA 16316 29 100.0 32 ............................. ATAATACTGTATACATAAACAGTATTTGAGGG 16377 29 100.0 32 ............................. TGCTGCGCAGACAATGGTCGCTATTTTGAAAC 16438 29 100.0 32 ............................. CCGGGCGATCATGTCCGCACAGTCAAACGCTC 16499 29 100.0 32 ............................. ATGAGTTCGTTCTGCCTGATAACACCCGCCGC 16560 29 100.0 32 ............................. TATACCGGCAATCACTGACGTCAACTCAGAAG 16621 29 100.0 32 ............................. GTACCGAGGTCAATGACGCTAACGGCCTGCAC 16682 29 100.0 32 ............................. CGCGCGCGCTGATCCTGGAGGGATACCGGGAC 16743 29 100.0 32 ............................. CTGAGTTCGTGACGTTTACCTGCGGGGAAGAC 16804 29 100.0 32 ............................. ATCCAGAGCTGACGGCATTCACGTTTGACGGC 16865 29 100.0 32 ............................. AGCCGATGCCTACAGTCACAGCAGGCGGCCAG 16926 29 100.0 33 ............................. TGTATTTCTCGGTATCCGTGGAGCGGTTGCCCC 16988 29 100.0 32 ............................. GCGAACATCCCCGTATAGGTGCCGTCTCCGGT 17049 29 96.6 32 A............................ GAGCTGGCGGTGTTTTTCTGTCAGTAGACGAT 17110 29 100.0 32 ............................. CGCTCTTCTGGTTGATGTGGCATGCCTTATAG 17171 29 100.0 32 ............................. CTCAGCCTTCACCTGCTCTTCCAGTTGAGCCA 17232 29 100.0 32 ............................. ATATTGAGGGGGTCTAGCGAGACGTCTAAGTC 17293 29 100.0 32 ............................. CCTGACGAAGACTTCGTTCGCCTCATGCAAGG 17354 29 100.0 32 ............................. CCACTCAAAAAAGGTCGAAGCCAAAAGGTTAT 17415 29 100.0 32 ............................. GGGAGCTTTCATTTGATCAGGCATTTGAGCAG 17476 29 96.6 32 ..............T.............. AGCGGCCGTTACGTAACTTTTCACGTAACAGC 17537 29 100.0 32 ............................. ACACGTCGTTAGGTGTTCCGTACTGGGAGAAA 17598 29 100.0 32 ............................. CCAGGCGACCGTATCTGGGTGCGTGAAACGTG 17659 29 100.0 32 ............................. CCGCAAGCCGTATCAACGAATTACTGCTCGAA 17720 29 100.0 32 ............................. ACTGATATCACCGAACTGGCTCGGGCCATGAA 17781 29 79.3 0 ...........ATTC..........G..C | ========== ====== ====== ====== ============================= ================================= ================== 51 29 99.5 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCGTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //