Array 1 334858-336673 **** Predicted by CRISPRDetect 2.4 *** >NZ_VJWB01000001.1 Geobacillus sp. C56-T2 GC56T2_Contig257.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 334858 30 100.0 38 .............................. TCACGTTTATGCCAAGATACACCGCCTTTGCTAAAAGG 334926 30 100.0 36 .............................. ATATGATCTACAACTAATCCTTTTGGAGCATTCATT 334992 30 100.0 35 .............................. CCCTCGCAAGAAAAACGCCATACGGGCTAAAATTT 335057 30 100.0 36 .............................. TTAGATGTGCCGGATGTGGCACTTCTCTCGGACAAA 335123 30 100.0 38 .............................. ATCGGGTCGTCGATGATGAGCAAGTCCGCACCTTGCCC 335191 30 100.0 37 .............................. GTCTGCTCCCACTCACGCACATACATGGTAGAGGGTA 335258 30 100.0 37 .............................. GGAAGGGCCTTTTCAATCTCCGGACCCATCTTTTTCA 335325 30 100.0 38 .............................. ATCTTGCAAGTTCCAATACCGCCTATCCTTGTAGCTTC 335393 30 100.0 35 .............................. AGAATCGTCTGCGTTTTGGGCAACACGATTTTATC 335458 30 100.0 35 .............................. TATCGCTGAATCCAAGCTGATTTTGCTCAATCATC 335523 30 100.0 35 .............................. ATATATTCGCGTACAAACGTATAATCGACGACCGC 335588 30 100.0 35 .............................. TGGTTTTTTCGGCGCCGCTACCCACTGAACTAGGC 335653 30 100.0 36 .............................. TTTCAGCGGATAGCAAACGGTCTGCCGTCAACGATG 335719 30 100.0 36 .............................. TTATACTCAGGCGCACGGAAAAAATGCAACACTTTT 335785 30 100.0 36 .............................. TTATACTCAGGCGCACGGAAAAAATGCAACACTTTT 335851 30 100.0 34 .............................. TGCTTCTCCTCGTCCCATACGCCGTTAATTCCGT 335915 30 100.0 36 .............................. TTGTATGCGCCGCTGGACGTAACCCGCGAGGAAGTG 335981 30 100.0 36 .............................. AACGCCCCGGTCGCGGAAAAGTTGGTCGGCGCGGCC 336047 30 100.0 36 .............................. ACAGTACTAGGAACGTATACAACTACCTTATCCTTC 336113 30 100.0 35 .............................. ATCGGTGCTATAATTGCCATTATAGACCGTCTGCC 336178 30 100.0 36 .............................. GAGTAAAATACAATCCTTATCTATTCGATAGCTTTG 336244 30 100.0 36 .............................. CGGATTGCGATGCTTTCTGTTGAGGAGCGAAACTGA 336310 30 100.0 36 .............................. GAAACTTTCAAGCGTGCATGGCTCGATTTCATGAAA 336376 30 100.0 36 .............................. ATGAGTTCCATTTCTTTTTTAGTACGTCTTGTCATA 336442 30 100.0 38 .............................. TTTGCCTTCTGCAATAGATTGTAATTCGCTTGTAATGT 336510 30 100.0 36 .............................. TGCAACGCGAGCGCAAGCAGAAGACCGCGTGCACCG 336576 30 100.0 37 .............................. AATACATCGCCGTGCGGGCGCGGAAGGTGGCGTAGTC 336643 30 80.0 0 ..........C........C.A...TCT.. | C [336671] ========== ====== ====== ====== ============================== ====================================== ================== 28 30 99.3 36 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : ACCCATCGGTTCACTTGCCTCCCGAGCGGCTCGCCAAACTCACCTCCGTAGCGTCAACGCCGCTGCAGCCAGTGAAAGAAGCGATGGCGAAAACGGAAAAAGCGGGATACCAAGAGGCGATCATCGGCCGACTGCTTGGAGATATAAAAAGTTAGCACTCGTCCTTGTTCATGCAAGTGTTCGGATTCCAATGTTTGTATTCGTCTTGCCCGCGATGGATGGGCGGGCGGCGCCCGGGTCTTATTCACCGCATGCCGAGCGTTTGTCCTCGCTTAGGCAAACAGCAATCGGCAAACAAGGCAAGCCACAAATGCTAAGAAGCAGTCTTTGCTTGTCGTCGACCTCCAATCGCGCAAAAAACCCAGGGGGTCGACGACATTGGTTTTGATCGCCTGATCCCTACAGCCATCAAGGATAGATTTGATTGACAGAATCTTCGAAACGTGTTATGCTGAAGTTGCCGCTGCAGGAGAAAGCTTGTTATGGCAGCGGTTTTTGGG # Right flank : CTGTGTGCAGGATGTCGCCTTGGGGACGGCGAATAGAAAAAGAGAGACCATCAAGGTGAGGTGATTGAATGGCGACTGACCATGATCGGCTGTTCAAAGAGCTGATCCGCACGTTTTTCGAAGAGTTTCTGCTCCTCTTTTTCCCCAACATGCACGAGCATATCGATTTCCGCCATCTGTCCTTTTTATCCGAAGAGCTGTTTACTGATGTGACGGCCGGTGAAAAGTACCGCGTTGATTTGCTGGTTGAGACGAAGCTGAAAGGCGAAGACGGGCTGATCACCGTGCACGTGGAAACGCAAGGGTATGTCCAGCCGTCGTTTGCCGAGCGCATGTTCCTCTATTTCAGCCGCTTGTATGAAACCTACCGGACCCGCATCGTTCCGATCGCCGTCTTCCACCATGATTCCCTCCGCGAGGAACCGTCTGTGTTTTCGATGGAATTTCCGTTTGGCGAAGTGCTGCAGTTTCGCTTTTTTCCGGTGGCGTTGCGGAAGAAG # Questionable array : NO Score: 9.22 # Score Detail : 1:0, 2:3, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 2 346787-348480 **** Predicted by CRISPRDetect 2.4 *** >NZ_VJWB01000001.1 Geobacillus sp. C56-T2 GC56T2_Contig257.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 346787 30 100.0 37 .............................. GCACATGATTCATTATTTTGTTAGAACACCTATTTGG 346854 30 100.0 37 .............................. CCGGATTTGATCGTTCACCGGCTGATCCGGACGTATC 346921 30 100.0 35 .............................. GCGAAGTGGAGGGAAAAACAAAATGAACCAATTAC 346986 30 100.0 37 .............................. GTCGATCAGTTTAAGGACGTCATCCAGCGGGATCTGC 347053 30 100.0 36 .............................. TCCCAGAAGGTGATATATACCGTTTGATCATTAAAG 347119 30 100.0 36 .............................. CCCATGGACCGTTATTGGCGGCTCTAGAGCGCTTGC 347185 30 100.0 36 .............................. TTTGTAATGAATTTAAAAACGCAAAACAGGAAACAA 347251 30 100.0 36 .............................. ATTCGGTGACGAGTTGGGACGTCGAAGGGCATCGCG 347317 30 100.0 37 .............................. GCAAACGAACAGGTCTCAAAGTGCGGCGCAGAAATGC 347384 30 100.0 36 .............................. ATGCGATGCATACGAATGTCGGAAATTGGCGAAAAA 347450 30 100.0 37 .............................. AGACCGCGATGTACCACCTCGAGCGCCCCGTGACAGC 347517 30 100.0 38 .............................. CGGTTCGGCACTGCTTCAAGCCCTCTTTATGATCAGCA 347585 30 100.0 38 .............................. CCTCTCCCCCTTTAGAAAGGCACATAGATTCTATTCCC 347653 30 100.0 36 .............................. AACTCTCGAATCCCGACTTCTTGCATCCATTTCCGT 347719 30 100.0 35 .............................. GCCTTCGCTCCTTCGCGTTCCGCTAGGATGCGAGG 347784 30 100.0 35 .............................. TCTAATGTTTCCAAACGTCTACGCGCCAACCTTTT 347849 30 100.0 37 .............................. GTGTTGTATATACATTTCCTTCCGCATCTACCCTCGC 347916 30 100.0 36 .............................. TCCCCTCCCGCTTTTTCGATTGCATACTTAATCGCC 347982 30 100.0 35 .............................. TCCACAGTCGGGAACAACCTCCGCGATGTAGGACA 348047 30 100.0 39 .............................. TACAGGCAGAAAGTATGGGCCACGCGTGATTGCAGTGGG 348116 30 100.0 37 .............................. CGATCACGCGGTAAACTTCCTTTACGGGCTGGCTAAT 348183 30 100.0 36 .............................. TACATATCGCAATACTGATGCAACCATTTATGAGGC 348249 30 100.0 35 .............................. ATCACCGTCAAGCATGACTACTGGGCACCATACAA 348314 30 100.0 38 .............................. TAATAATTGTAGTATCTGCCTTAATACTGGTGCTCCAC 348382 30 100.0 38 .............................. GTGGTCCCATGCACCAATCTTGGTATTCGAAGCTGTTT 348450 30 83.3 0 ...................C.A...TCT.. | C [348478] ========== ====== ====== ====== ============================== ======================================= ================== 26 30 99.4 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : TATGAAACGATCGATGGAAAAAAGAAAACGCATTTTTTCGGACCGGACGACGACGTCTTTCCCCACCTCGTGGAGCTGAATTTCCGCCATAAATACGAAGCGTACTATGGCGTCGAGCCAGAAGAGAGATTGATGATCGAGCCTGTCCATGTCCACCACCGTCATCGAGTGGTAACACGATTCAAAGATATGTATATTACGGGCTGGTTAGGCCATTATCTTCTTTCCTCTTCTCCCGAACAACTGACGTTTCTATACCACGTTGGCCTAGGCAGCCGCAATTCCCAAGGATTCGGCATGTTTCGGTTAATCAGCGAGTGAGCCATTCTGATTGTCGTCGACCTCCAATCGTGCAAAAACCCTAGGGGGTCGACGACATTGGTTTTGATCGCTTGATCCCTACAGCCATCATGGTTGAACTTGATTGACAGAATCTTCGAAACTTGTTATTCTGATGATGACGTTGAAGGGAAAAGGTTGCTATGACAACACTTTTTGGG # Right flank : CTGTGTGCAGGATGCCGCCTTGGGGACGGCGAATAGAAAAGGAGAGACCATCAAGGTGAGGTGATTGAATGGCGATTGACCATGATCGGCTGTTCAAAGAGCTGATCCGCACGTTTTTCGAAGAGTTTCTGCTCCTCTTTTTCCCCGACATGCACGAGCATATCGATTTCCGCCATCTGTCCTTTTTATCCGAAGAGCTGTTTACTGATGTGACGGCCGGTGAAAAGTACCGCGTTGATTTGCTGGTCGAGACGAAGCTGAAAGGCGAAGACGGGCTGATCACCGTGCACGTGGAAACGCAAGGGTATGTCCAGCCGTCGTTTGCCGAGCGCATGTTCCTCTATTTCAGCCGCTTGTATGAAACCTACCGGACCCGCATCGTTCCGATCGCCGTCTTCCACCATGATTCCCTCCGCGAGGAACCGTCTGTGTTTTCGATGGAATTTCCGTTTGGCGAAGTGCTGCAGTTTCGCTTTTTTCCGGTGGCGTTGCGGAAGAAG # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 3 371736-372700 **** Predicted by CRISPRDetect 2.4 *** >NZ_VJWB01000001.1 Geobacillus sp. C56-T2 GC56T2_Contig257.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================== ================== 371736 30 100.0 35 .............................. TCCTTTGCCTCCTCCCAAATCCAACTCGGGAGGAG 371801 30 100.0 35 .............................. TAGCCGATGATGAATTGCACATCGGATTGTCCAGT 371866 30 100.0 36 .............................. TATAGTTCAGCACCGCAGTGACGGCACTCGCCGACC 371932 30 100.0 36 .............................. ACTCAAGCGTACCATATCGGCTCGCCGTTGTCAAGC 371998 30 100.0 39 .............................. TCCTATGTGTCTGTATATATACGAACGTATGTACTATAT 372067 30 100.0 35 .............................. TAGGAAGCGGGACGTTTTTTGTCCCGCTTGTCAAC 372132 30 100.0 37 .............................. ACCCTAAAAACTTCGCCACCCCACGCGCGTGAGCTTC 372199 30 100.0 39 .............................. CTTCCTCCTCACCTAACGAATCAATATAGGCTTGGATGG 372268 30 100.0 35 .............................. CTTCCATCTTCAAACACCGCCGTCTCTCCCTCTTG 372333 30 100.0 39 .............................. TTGAGGATGGCCAGATAGCTGATCGCGACATATTGAACA 372402 30 100.0 37 .............................. TACACGTACGTTTCAAACCCCGTTCCCTTGCCAGCGT 372469 30 100.0 36 .............................. ATCGCTGCCACCGAACCAATGCCGTACAAAGCGTAT 372535 30 96.7 40 ........T..................... CAGTGGCGGCTACAAGGTACACAAACATGGAATACTGTGA 372605 30 96.7 36 .................A............ CCACGGCAACGACGAGATTTTTCGCGGTATTTTATT 372671 30 90.0 0 .....................A..G..G.. | ========== ====== ====== ====== ============================== ======================================== ================== 15 30 98.9 37 GTTTTTATCGTACCTATGAGGGATTGAAAC # Left flank : ACGATCGAAGTCCAGCCGGTCGACATGTTTCCCCATACGGCGCATGTCGAGTGTGTGGCGAAATTGCAATGGCGGATGTAAACGCCAAACAACTGATCTCGATTGAACGTCATGTCCAAAAGAAGTGCCCGCCTCAAGAAATGGGCAGTCCGACCGCCCGCTGAGCAGGCGAGCGAGGAAGGCCGTTAGCCATCATCAATGAATCGGATCAGTGGTGGTGAGAATGGATACTTTCGGAACAAAGGGAAGCAGAAAGGGCTGATGGGGAACACGCCCCAATCGCTTGAAGCCCCTTCTCCAAGCGAAACGCAGATGGCGGATCCGTTCACTTGTCGTCGACCTCCAATCGTGCAAAAACCCCAGGGGGTCGACGACATTGGTTTTGATCGCTTGATCCCTACAGCCATGACGGATGAACTTGATTGACAGAATCTTCGAAACGTGTTATTCTGAGGATGGCGTTTAAGGGAAAAAGCTTGATATGACAACAATTTTTGGGA # Right flank : CAACTGTTACGCCTACAGCTGTCCATAGCATACCCTTGTGTTGCTTCCACTGATCTCCCCATTCAACCGCTTATGTTTTTGGCTGTTTTGGTTGCTTTTCTCCTTCATTTGGCCAACAGAGAGGGATTGAGTCGAGCGCATGTTCCTCTATTTCAGCCGTTTATAAGAAACTTGGCGCATCCGTAACGTTTTACTCCTGTTTTCCGCGGTGATTCCTTTGTGATTGTACCCATTGATGTTCTATAGGAAAGGGGAAATATCATTCAGAAAATATGAAAAAAAACTATTATAAAAAATTATTGAAACAGAAATATGCGATATTTATAATATAGCTTAGCCGTGTGTTATACAACAAAAGCAACTGAATCAATGAGGAGGGATGAATTTGATTGACAAACTTGTTGAGACGGTGAATGAGTTATTATGGAGCCCTCTCTTAATTCTTTTTATTGTTTTTTGTGGAGTGTATTTTAGTATTCGCACCCGGTTTTTGCAGATTC # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTATCGTACCTATGAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.33%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-1.40,-0.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-50.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 4 1362782-1363112 **** Predicted by CRISPRDetect 2.4 *** >NZ_VJWB01000001.1 Geobacillus sp. C56-T2 GC56T2_Contig257.1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 1362782 36 100.0 36 .................................... AGTTTGACGTTGCACTTCTTTACGCAAGGCTTTATG 1362854 36 100.0 41 .................................... TTGTTTTTACTGCTTCATCGATGGCATTTTTTTCTTTTACC 1362931 36 100.0 38 .................................... CGATTTGGTCGACAAACTCAGCCTTCGTAATATGGACG 1363005 36 100.0 36 .................................... ATTCTTCCATTTCTTCTTTAGTGTAATTCTCAATAT 1363077 36 88.9 0 .............A.................CT.C. | ========== ====== ====== ====== ==================================== ========================================= ================== 5 36 97.8 38 CTTGAAAGAGGAAGGCCTCGTTTAGAGGATTGAAAC # Left flank : GTCGCTTTGCTGGAAAGCGAATTGTTCAGCTATATGGACGGATTTCCCCATGCGAAAAATGGTAGGTCTTGAGCGCTACGCTTCGCAGCACGGGGAAACCCAAACGTTCGTTGTTGACGGTGCCGTCTTGCACATGTATCGAGCCGGTTGCCGCGTGTTCGATCAGGTGGCTTCCCGCAGTGGGTAAGGAAAAGAGAATAGCACAGCCGCTGACTGATCAAGCTGCCATGCCGCCTTCCCCGCCCGACCAGTTCGGCTCGTTCCCGCGCATTTTGCGCGGTGCACGGTCCAAAAACGGCGAAAAAACGGGGGAGGTGTGCATGGCTGTTTTTCTTTCGTGAAACGAAACATCACCTTGATTTATCAAAAGCTTGGACAATTGACGTTTTTGGTCAATCATACAAGTTGACATAACCACATTTTATTTTTCAAAGGGGTAGAAGGGGTGTGCAAAATGGCCTCTTGCCGCCTTAGAAAATCGATGGTAAAATGAAGGTGCT # Right flank : CCCCGCTTCCGTTCGCAGGAGGCGGGGTTGTTTTTCGGCTAGAAATGGAGGCAGGAAAACCGTTTGCCATGGCGAAATAATGGAAACACGAGCACTTTTTCGCGGACAAGAAACGCCGCGGGCAAGGCGGCGTGGGGGAGGGGGCGTGCGATGGCAAACGGCGGCAGGAAAGCAAAAGGAGCAGCGAGGGCGCGGCTTGAGCTGGTTAAGGAGCTTTTTCCGGAAGCGGTGACGGGCGAAGCGATCGACTGGCAGCGGCTGAAAAAGGCGCTTGGCTGCCAGGCGGAGGACGAAGTGTATGAGTTTACGTGGCCAGGAAAAGCGGAGGCGAAGCGGTTGGCGGAGATGCCCGCCACGGGAGTGCTGCGGCCCGACCGGGAGAAAAGCAAGAGGTGGGAGACGACAAGCAATTGGTACATTGAAGGGGATAATTTGGAAGCGTTAAAGTTGTTGCGCTCCTCACATGAAGGAAAAGTGCAAATGATTTACATTGATCCGCC # Questionable array : NO Score: 5.95 # Score Detail : 1:0, 2:0, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTGAAAGAGGAAGGCCTCGTTTAGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.70,-4.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : NA // Array 5 2010263-2010443 **** Predicted by CRISPRDetect 2.4 *** >NZ_VJWB01000001.1 Geobacillus sp. C56-T2 GC56T2_Contig257.1, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================== ============================================= ================== 2010263 31 100.0 45 ............................... CGCAACTTTGTTGCAAAACGCCGCCACACCAATAAAAGATGGTTC 2010339 31 100.0 43 ............................... TAGTTTCAAATTCAATTATTGGTAAAAGGAATTTATTTGGTTC 2010413 31 100.0 0 ............................... | ========== ====== ====== ====== =============================== ============================================= ================== 3 31 100.0 44 AATCCTCTCCGCGAGGCCCAATTCCTTCAAC # Left flank : TCTCATCACCAAAAGTCGACGTGACAGCCCGCTTCTTTTAGAGGCAAAATAAGGCGTCTAGTTTGTTGCTGCTTCATAAGCAAAAGTCTGTCCATATTGCTTTCAAGCTTGTAGATACACACCCCATCGCCATTACGCGGGGGACATTAACATAATAAACATGCCTAAGCATAAGCGAAAGCCCATCAGCTTACGGAACTGTACACTTTAACAAGCCAACGACACATCTTTGAACCTAGGAGCTATCGAACGTGAAACAGGTGAAGGCGTTAACGATTCAAGACTCCTGCGGCTTTATCCCGCGTGAAGCGTCAACTGAGGACAAACAGGGGAAACATTCCCTAGAAGGCTAGGCAAAAACGGTTGTTTCTTTTGAACGATGGGGGAGTGTGTAAAAGGCGATACCGATGCAACAGAGCTTTTCTATTTGAGAAACGAGATCGGTAAGCGGCCTGCTCCCTTAAATCACCGGCCTTCTAGCATTTTTCGAAGGGGTAAAG # Right flank : CAGCATCTTTATTTTACCATTGATTCTCTAAGGCGGCAAGAGGCCATTTTGCACACCCCTCACACTCCCGCAAACTATAAAAATTGATTATGTAAACTTGTACAGATGACCGAAATTGCCAAACGTTCAAACTATTGATCTATCAATACCATATTTCGTGAATCGAAAGAAAAAGAGGCTTGCACACCCCTGCCGTTTTTGCGGCTGTTTTGGGGTGTGCAGCTAGGGAAGGTCATCGGCTTGTTCCTCGCCGCGCCAACACCTGCTCAAGCCCCACGGCCACGCCGTCTTCCTCATGGGAGAGGGTGACGAAATCACTATTCGCTTTCAATTCGGGGGCGGCGTTGGCCATGGCGACGCGGCAGCCCGCCACCGCAAACATCGACAAGTCGTTATGGCTGTCGCCAAAGACGACCGTATCGCGCATATCGATGCCGTAATGGGCGGCGAGTTGCTTGAGCGCCTCCCCTTTCGTCGCCCGTTCGTTGTTCATCTCAATG # Questionable array : NO Score: 2.67 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : AATCCTCTCCGCGAGGCCCAATTCCTTCAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [7,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.70,-0.70] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [48.3-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 6 2455731-2454768 **** Predicted by CRISPRDetect 2.4 *** >NZ_VJWB01000001.1 Geobacillus sp. C56-T2 GC56T2_Contig257.1, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 2455730 37 100.0 36 ..................................... ATAATGAAGTTCGCGCTGTTCTGTGAACCGATCGCG 2455657 37 100.0 33 ..................................... ATGAGCGGTAAAAACATTCTGGCGTCTGAACAT 2455587 37 100.0 33 ..................................... CGGATCGACGGGTCGGTCAACTCCAAGAGCAAA 2455517 37 100.0 34 ..................................... TTTGTATCAACCGTGATTTGAGCAATGCGTTTTT 2455446 37 100.0 34 ..................................... CGTTGTCGTCATCCATATGAATACAGGCGGCGTC 2455375 37 97.3 35 ...................T................. CGGTTGCAGCGCGGACGGTGAACAGACCAACACGG 2455303 37 100.0 35 ..................................... ATCAACAACCGCGTAATAGATGCGGTCGGGCTCGT 2455231 37 100.0 35 ..................................... ACAATGCCCCGCTCCGTCTTCTGATACATTTTAAG 2455159 37 100.0 34 ..................................... ATATCGTCGGGCGCACTCCTTCCTATATAGCTTC 2455088 37 100.0 33 ..................................... CACGCTTCCAGCGCGTCAATGTCGACCGGTTCA 2455018 37 100.0 37 ..................................... AAAGTTACCGTCGTCGTAGAAAGTTTGTCGGTGACGG 2454944 37 100.0 33 ..................................... AATTGACACAAGAGATGTGAATATTGTTAAATC 2454874 37 100.0 33 ..................................... ACTCCGAGGGCGAATGGAACGACACTGTATATG 2454804 37 97.3 0 .....C............................... | ========== ====== ====== ====== ===================================== ===================================== ================== 14 37 99.6 34 GTTGCACCCAGCCAAAAGGCTGGGTGAGGATTGAAAC # Left flank : TGACGTATGATGTAGAGACATTGGAATCAAGTGGTCAAAAACGGTTACGGAAAGTGGCGACCATTTGCCAAAACTTTGGCCAGCGGGTGCAAAAATCCGTATTTGAATGCAGTGTCAGCCAAGCTCAGTTGGAGGAGATGGAGCATCAACTATTGCGTGTCATTGATTTGGAAAAGGATAGCTTGAGGATATACACATTGTACGGTAGCCGGTCAAAGGCGGTTCGTGTTTACGGAAAAGACGATTACGTTGATTATAATGATCCCATCATTTTATGAGAGCAGCTAGCTGCTGAGATGTGCGGCAACATCGAGAATGCCGCGCGAACATAGAGCGATTGCCAAACCCTAAGGAGGATCGCGATGAGAGAAAAATCCCGTTATAAAGAGGAAAATGGCAAATGCCTTGCGGTCCTTTATGGCCTTGATGGCGACAAAATTGACAAGTTCGCGTTTTCCTATGTGGAAATCCGCTCAACACAACGTATCTAAACGCGAGCG # Right flank : CACCATTACCGCGCGACCATTAGCGGCGCGTAAGTTGGGGGCTGATCCCAAAACGCATTCCCGTTTTGGGTCAGCCCCGAGGATTGAGACTTTGGTAAAAAGGTGCGTGCAACAGGAAACAGTTATGTCGCGAACAAATCAACTGACAAATGGCCGCTAGTCCTAAGTGGGAATGTGAGGGGAGATTTTTTGTCGGATAAAGAAGGAATTGGTTGTTTGATGTCGAATGAGTTTTTATGACGAGAACTGTTGCCTCACCTTCTCCACGTCTTCTCGAAACTTCTCATGCGTTTTGGCCAGCACTTCTTCAAAAACGCCGTCGAGCCGCCGCTCGAGGACGGCGATGCCTTCCCCGGTGATTCCGCCTTTGACGCATACTTTTTCCTGCAAAGTTTGAAGCGTATACAAGTCCCGCCTCAGCAATTCCCCGAGGCCGATGATCATGTCGGTTGCCAGCATCGTCGCTTGCTCGGTCGAGATGGCGGTCTTCGCTGCTGCGG # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGCACCCAGCCAAAAGGCTGGGTGAGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: R [6,11] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCACACCCGGCCGAAAGGCCGGGTGAGGATTGAAAC with 91% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-16.30,-15.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [41.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //