Array 1 335317-336957 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020028.1 Paenibacillus kribbensis strain AM49 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 335317 32 100.0 36 ................................ CGTCTGGCTGTAGAGGTCAGCGGACAGCGTACCTTG 335385 32 100.0 35 ................................ TTAGATTAATCTAAGAAATGCAAATTTCAATACAC 335452 32 100.0 35 ................................ TGCACATATCCATTATCGTATTCGGTCTTATTTTA 335519 32 100.0 38 ................................ GCGTTGCATTTTACTCAGATTCTGGCGTTTTGATTGGC 335589 32 100.0 38 ................................ ATCTTTCCGAAGAAAAAGGGAAATATTTCGCTATGGTA 335659 32 100.0 35 ................................ TGTTTCACCAAGAACCTGGAACCACCGCGAAAATT 335726 32 100.0 36 ................................ ATACGGTACGTTATATTAGATCGAATCCGGGTTAAA 335794 32 100.0 34 ................................ AATACGGACGCTTTCTATGTACAAGAGCCTGGCG 335860 32 100.0 36 ................................ GATTAATAGTCGAGTCAGGGGCCTTTTTGCGTTGTC 335928 32 100.0 33 ................................ TCTTACTCCTAAAATGGTTGATTGGATGGCTAA 335993 32 100.0 34 ................................ TGTATACGAAAAAAATGGCCATTTTTTTTATGTA 336059 32 100.0 35 ................................ TCCCCCGTTGCTTGTTCGCTATCTTATGCCCCTAT 336126 32 100.0 34 ................................ CTGTATGAAAAAAGGATGATATTATTGTGTTCAA 336192 32 100.0 33 ................................ CTGAAAATGAGGTGCCTATGACCATCTTTTGCA 336257 32 100.0 33 ................................ AAGTGAAAAATGTCAAGTGGAATAGCGTAGAAC 336322 32 100.0 37 ................................ ATATCTGTTATCCGTAATTCCTTTCGTAGAGACAAGG 336391 32 100.0 37 ................................ TAGGTATCGTAAAGGGTGATCCAATCGGCTACTACGG 336460 32 100.0 34 ................................ CTGAAAATGAGGTGCCTATGACCATCTTTTGCAG 336526 32 100.0 36 ................................ ATGTGCTGGACGCTGTGGGCAGCTGGCATAAGTTTG 336594 32 100.0 33 ................................ ATATCACCACTCATTTCCGAACATTATTTCAAC 336659 32 100.0 36 ................................ GCTGCCTCTGAATTTACTTATACGGTTCCGCTGCCA 336727 32 100.0 34 ................................ TTCATCACCTGGGCTTATATGTTGGGTGGCGCTA 336793 32 96.9 34 .............T.................. AACGGAGTTAAGTAGATAACCATCAACTTTTTTA 336859 32 96.9 35 .............T.................. TCCGTCTCGCCGGATGAGTTTTTTGCATCAGCCAA 336926 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ====================================== ================== 25 32 99.8 35 GTCGCACTCTATACGAGTGCGTGGATTGAAAT # Left flank : ACAGCCGCAAGCAGGTATTCGATTGCCGTCTGGAAACGACGGATGGCCTCTTTTGCTTCACACTTCAAGAGCTTCCGCGTGAGACGGCCGAGGCGATTGTACGTTATAGCGGAGAACTGAACGTATTTCGTTTTGTAACACCGGAGGATAAATCCATCGTGAAGCATTGGTATTACGTAACCCCGGAAAGCGTGAAATATAATGATCAGACAGGCGAGCTTACGCTCGAAGCTGATTCTAAAATTGAATATCATCCCGAGGAGTATTGGGGAGATTAACACTATTTTATATTGAGTTTTTGAAGTGGCTGTCCAAGTAAGGTGCGAATGTGAAGCTCACATAAAAACCCCAGGTCCTTCGCACCTCGAATTTTGTCGAAAAAGGCTTGGAAAGGGTGTTGGCGATAAAAGTCAACGCTTGATCCAGCCCTTTTCGGTATCGTTTATTACGGGAATGTGTGAGATTGATACCATTGGGGTATGAATCTCTCCATTTTCGCT # Right flank : TAGCACAGAATCTAATCCCCAACGAAACATGCGTTGATGGGTTGTCACAATGTATACAGCAACCCTCTTTGGCTACCTTCTTTTTCCTGTCTCCTGATCGTGGAACAAGATGTTCCCTCCCTAATAAATAAATTAAGCTACAAAGTGATTCAGGGAAAAAACAAAAACACAAGCACATGCGCTTGTGTTTTTGACTTGACTATCTTGTTATTCTTGAATTTTTCTTGCGATTTCCATCAATTTGTCAAGAGTGGAATTGAAAGAAGAAACAGTATAGAAGTGGTCTTTTGTAATCAGATGAAGCCTTGTTCTGATTAAATAGAGTGATCCCCTTCTTTCCAAGACAAGAGTGGACTTTATTAATCAGGATGGTTATGTAAGATTACTAGTATGTTCTTATGACTAATAAAGCATGTTCAAAAAACAGCTATTATAAATTAGTTAGCTATTTTTTACATTTGTTTGTCTTCTCTTGCATTATAAGTTTATTATTGTAATTT # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATACGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.70,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [60.0-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9,0.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 1792769-1794412 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020028.1 Paenibacillus kribbensis strain AM49 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 1792769 32 100.0 37 ................................ CACACAACTTCGGGGTCGTCCAGGTCTGGCAAGACCA 1792838 32 100.0 37 ................................ ATCTTTTGCTTGCAATGCTTGGTGCCTTTTTTGTAAT 1792907 32 100.0 38 ................................ TTGTCCAGCGAAACAGACGTACCCGAAACGGCTTGCTT 1792977 32 100.0 34 ................................ AACAAGACTGAGGTCAAGGCCAAATTTGCGGACG 1793043 32 100.0 35 ................................ TTGTTTGGATTTTTGGCATTGGCATATGCGGGGGA 1793110 32 100.0 34 ................................ GTTTCATCCAAATCTTTCCACCTCCTCACATAAA 1793176 32 100.0 36 ................................ TTCCTCCGGTATTCTTTTGCGCCCCAATTATATCCA 1793244 32 100.0 35 ................................ CACTATAATTCCCAATGACATGGCAAACTGAATGA 1793311 32 100.0 35 ................................ TTGGTGAACACCGTTACATTCATGAGTGCTTTCAG 1793378 32 100.0 36 ................................ TTACAAAAGAAAAGGCCACGTTTCACGTAGTTGTGG 1793446 32 100.0 35 ................................ TTGAAACAGTCATTAATCTTCTGCCGCAAGCTGGC 1793513 32 100.0 34 ................................ CAATGAATAAAAATAAAGTTTGCCAATACTTGAA 1793579 32 100.0 35 ................................ TTCGCTGGGGTCATTTCGTTTGTTAGGGGGGTGAG 1793646 32 100.0 35 ................................ ACAAGCGTATGGACGAGCAAAACCACAATCTTTCT 1793713 32 100.0 35 ................................ ACAGCAGCTACAGCAGCAGTTACAAGTCCTTTGGG 1793780 32 100.0 34 ................................ TTGTATACGGAAAATGATTGGCCAATTTTTTGTG 1793846 32 100.0 33 ................................ ATTTTCGCCCTCCTATCGTAACGCATTACCGCA 1793911 32 100.0 35 ................................ TGAGGGAAAAAACATCATATGGGACGCGCCACCTG 1793978 32 100.0 33 ................................ TTAACGGGCCTGTGGATAAGAAATGGACGAGGG 1794043 32 100.0 35 ................................ TTATTTGACGTGTGATCGCCTAGGAATCTATCATA 1794110 32 100.0 37 ................................ TCAACGGGAAACAGGTTGGCACAGCAGGGGCCGACGA 1794179 32 100.0 35 ................................ ACAACTCTATCAATCTCTTTATTTAAAGAACAGAA 1794246 32 100.0 35 ................................ CCAAGGAGGGAACTGATTTGGATGGACTCGTTATC 1794313 32 100.0 35 ................................ ATGGAATCCGTCCTTACTGTCTGTCAGCAGCTTGG 1794380 32 84.4 0 ...........C...G.....C.C...A.... | A [1794401] ========== ====== ====== ====== ================================ ====================================== ================== 25 32 99.4 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : GAATCCTGTGGAAGCATTGTCTATTTATTTTTTGGAGTCGGTGGATATACATATCCATTGGGAATGGCGTGATGCTGGCGGTACAAGTGAAAAGGCGATTCAGTATAAAAAAGAAGTTCCTTTCATGACGCTGAATCAGGCTATTGAGAGGGCCGAAGGGGAGAGAAATGCCTGTACCTAAAATATTCTACGTATTATATTCCTAAGTATAAAGCAGAGATTGATCGGACTGAAAATAGGAATATCACACGGATATATAGTAGGTCAAATGTAGTATGGGTTGCGTTGTGTATGGATAGCAAAATATAATGAATAAAGCTGGTGCGAACCCCAAGCGCACATAAAAATCCCGGGTCCTTCGCACCTCGAAAATTGTCGAAAAGTTTCGAATTCACTATCTATCCGCAAAAGTCAATAGCTGATCCAAGCTTAGTAGGCATCAGTTTTGCGACAATGTATGAAATTGATATCGTTAGGGTATGAATTACTGCATTTTCGCT # Right flank : TCGCGAGCAATTGAAGATTTTACGACTACTTAACCTTGCTACTCTTTTTAAGGGAGTCCGACGCATTTTCGCCAAGAATGGATACAAATCTTAATTAAACTGGCTCTCTTTTAAATCAGGGGAGCCTTTTTTGTTGTGATTTTTATAGACAGAAAAAGTAGAAAAAGAGAGGCTTCTTCCATGATGCTAGCCTCAAGTTATAAAAAAATATCAAAACAGTATCTACCATTAAAACAAGAATTGTTTTATGATAGAACTATACATCCTAGAATTTCCTATATTTATATGAAGAATAACTACAAAATCTTTAACATCATTTGAGAGGAGATTTCAGAATGAAAAGATTCAGAAAAGTGATTTCAGTTACATTAAGCTCAATGCTCCTGCTTTCTTTTGGAATGACTGCAAACGCGAGTGCAAGCACAGAGGAGAAGACGGATCAAGCGATTCAAGCGGCTTCCAATGTACAGCTAACAACGGATAAAGAAAGTGTTATAAAA # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.40,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.78,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 3337894-3336456 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020028.1 Paenibacillus kribbensis strain AM49 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ===================================== ================== 3337893 32 100.0 35 ................................ TTTTTGCCCGTTTGGAGTGCTATGATTAACAAAAA 3337826 32 100.0 34 ................................ AATACACCATAGTGTTATGGTTAGTTACAAGAGC 3337760 32 100.0 34 ................................ CTCTTTCTCGTGCCTACTGCAAGTGCCTATCCAG 3337694 32 100.0 35 ................................ CGATCCTGAGCGCATATGCTATGTCGATAGACCTT 3337627 32 100.0 34 ................................ TGTTTCACCAAGAACCTGGAACCACCGCGAAAAT 3337561 32 100.0 34 ................................ TGGAAATACGGCGATGTGACCGTGTTCCAAGACA 3337495 32 100.0 35 ................................ ATGTGCTGGACGCTGTGGGCAGCTGGCATAAGTTT 3337428 32 100.0 37 ................................ TTAAATTCCAATAAGAAATACAAATTTCAATACACCA 3337359 32 100.0 35 ................................ TAATGGCGATACCATTTAAGGTACGTCGGACTAGA 3337292 32 100.0 34 ................................ GCATTGCCACGTTGCAAGAACCTACCGATACCAT 3337226 32 100.0 35 ................................ CTCTTTCTCGTGCCTACTGCAAGTGCCTATCCAGG 3337159 32 100.0 37 ................................ GTTCTTGTATCCGCTATAACCCTTGTCTCCTGGCCTG 3337090 32 100.0 35 ................................ CATTGGGCTTCGGACATCTTCAAAAGTCCTTTTTC 3337023 32 100.0 35 ................................ ACTCATTGCTTAAAGCCACCCCACTTCCTCGTTAT 3336956 32 100.0 35 ................................ TTTGATGTGGAAACTATGATGAACGATAATTGGGA 3336889 32 100.0 36 ................................ AATCGTCCTACTGCTGCGCTAATGATCTCCCGGTAA 3336821 32 100.0 36 ................................ ACCGATTTTTTTAATGTTGGATGTGTAAACTGACCG 3336753 32 100.0 35 ................................ AACCACCCGAGGAGAGGGCCGAAGATGCTATCGAC 3336686 32 100.0 34 ................................ TGTGGCTTATGGCATTAAACGTTTGGTGATCGAA 3336620 32 100.0 35 ................................ TCTGAAATTTCGTCTAAAATCTCCTGGAGTATCAA 3336553 32 100.0 34 ................................ AGATTCACCCTCTTGCTGCAAGATTATTTTCGCA 3336487 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ===================================== ================== 22 32 100.0 35 GTCGCACTCTGTATGAGTGCGTGGATTGAAAT # Left flank : TCCATTTTTGTGGAAGTAGGTGTGAAACTTGCTCATTTTGATTACTTATGATGTAAGTACGGTAGACAGAGAAGGTAGAAAAAGACTGGCAAAGGTTGCGAAAAAGTGTGTAGATCACGGACAAAGGGTGCAAAATTCTGTATTTGAATGTATTTTGGATTCGACCCAGTTCCGCCGTTTAAAGTATGAATTAGAAGAATTGATAGACAAAAAAGAAGACAGCCTGCGTTTCTACAACTTAGGCGATAACTACAAAAAGAAAGTAGAGCATATAGGGGTCAAAGAGGCTTACGATATGGAAAGCCCACTCATTTTATAAGGTGCGAATGTGAAGCTCACATAAAAACTCCGGATCCTTCGCACCTCGAAATTTGTCGAAAAGGTTTGAGCTGGTTATTTTAGATAAATGTCAACGCTTGATGCAAGCCTTTTCGGCATCGTTTTTTTGCGGAAATGTGTGGAATTGATCTCATTAGAGTATGAATTACTGCATTTTCGCC # Right flank : TTCCAAGTACGCGGGTAATCTCAACTATTTTGTGTTGCACTATATGATTGTTCACCCTTTTATTTGTAATATATGTAAATTTTTCATTTCAAATAATGTAGACATAATATATTGGCAGATGGCCAATTTTGGCGAGAAATAAAGTGTGCATTTTGAAATTATGGAATTTTTATGTGAAGGGTGGTTATGGCTTGAAGCATACACCCTACGATTACAAAAGCACTCTTTTTGTCATATAATCTAAATGCGAAAAATGAAACACAAGAACGAAGTAGGCGGAATGGTGCTGTACAAGCGAAGCGGTCGCTTTTGTCCCCGGATTTTTACCCTTAATCATAGGCTCCATTCAAGAAAATCCGGGGGCGGTGGCGATGGGAAGCACCATCTGACTGCGTAGTGGCACAAAAAGTAACTTTTAAGTTCAGCTTGCAGGAGACTGTAGCATTTTAACTAAACATAAACCGCCAAAGTGCCTCTGGGATGCTCCAGAAGCACTTTTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTGTATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.37 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 3348658-3346616 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP020028.1 Paenibacillus kribbensis strain AM49 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ====================================== ================== 3348657 32 100.0 36 ................................ ACCCCTTAATTTTTTCCACTATAATTCCCAATGACA 3348589 32 100.0 37 ................................ AGCAATCCACCTGGATAGGCACTTGCAGTAGGCACGA 3348520 32 100.0 34 ................................ TGTAAATGGTTAAAAAGTAACAGTCGGGAGGGAA 3348454 32 100.0 34 ................................ TTCCTCCGGTATTCTTTTGCGCCCCAATTATATC 3348388 32 100.0 32 ................................ AAAAAAGCTGCTTTTCTTTTTGCCCGTTTGGA 3348323 32 100.0 35 ................................ TTTTTGCCCGTTTGGAGTGCTATGATTAACAAAAA 3348256 32 100.0 35 ................................ CCACCATCGTTTTTGATTAGCAGCTGCAATCATCC 3348189 32 100.0 33 ................................ TTATTCTACTGGATTTGACGCAGATATTCAATG 3348124 32 100.0 34 ................................ TTCTCGCTTGACGGTGTACAATTGGCGCTTTTTG 3348058 32 100.0 35 ................................ TTCTCGCTTGACGGTGTACAATTGGCGCTTTTTGC 3347991 32 100.0 36 ................................ CTTTCGTAGAGACAAGGTCTATGACGACCGGGACTA 3347923 32 100.0 36 ................................ AAGTACCATAGCGAAATATTTCCCTTTTTCTTCGGA 3347855 32 100.0 36 ................................ CTGAAAATGAGGTGCCTATGACCATCTTTTGCAGGC 3347787 32 100.0 35 ................................ TTTTTGCCCGTTTGGAGTGCTATGATTAACAAAAA 3347720 32 100.0 34 ................................ AATCAAGAGATCATTGTCATGCGAATCGAATATC 3347654 32 100.0 33 ................................ TTTTTCAAACTCCGATACCAAACAAAATAATTA 3347589 32 100.0 36 ................................ TGCTGAGCGTGTTGGAATAAGCAATAGTGTGCTTTC 3347521 32 100.0 34 ................................ ATCCATCATTTGTTTGGACGAGGCTCATACCGAT 3347455 32 100.0 35 ................................ TTACAAAAGAAAAGGCCACGTTTCACGTAGTTGTG 3347388 32 100.0 33 ................................ TTCATTCTCGCAGTTTAAGCGGCGCAAAAGTAA 3347323 32 100.0 36 ................................ ACCTTCAAGCTCTTGTATTTTAAGTTTCAAGCGTTT 3347255 32 100.0 38 ................................ CTCCTAAACGTTGGGAGATAATAGAAGACAAAATTAAA 3347185 32 100.0 38 ................................ ACGAACAACCATATGTGCACTTTGTTTCACATCAATAA 3347115 32 100.0 36 ................................ TTTACCCCATGTATCCACGGCAGTAACCTTGAATTT 3347047 32 100.0 34 ................................ AGCACCGAAAACTTGGAACTCTCTAACGTTCGTG 3346981 32 100.0 34 ................................ TGAAATAGATCATACATATTTTTTTGATGTTGAA 3346915 32 100.0 34 ................................ CATCAAAGAAATATTCGAAGACTCTCGCGTCGCC 3346849 32 100.0 33 ................................ AAGAGAAGCCAAAAAAATCTGAAACTTACATTG 3346784 32 100.0 35 ................................ AAGTAGTGGGCATATGGAAGATTGGAGCCGACTTC 3346717 32 100.0 36 ................................ AATCTCTGCACCTCTTGTAAGTCTTGTTTATTCAGC 3346649 32 87.5 0 ............G.......A.....AC.... | CG [3346619] ========== ====== ====== ====== ================================ ====================================== ================== 31 32 99.6 35 GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Left flank : AATTCCGTATTCGTGTCAATGTCATCTATCCCGGTGCCATTTCGACCAATATTGATGAAACAACGGAGAAATCCGAAAGATTAAAGCAGATTACCATCCCCGTTCAGTTTCCCGAAGGTGGACAGCCGTTGGCTAATGGGCCCGGTCAACCTGGTCAGGTAGCTGATTTGGTGACCTTCTTGGCTTCGGATCATTCGCGCCACATTACCGGCGCACAAATTGTAATTGATGGTGCGGAATCTTTATTGTTTTAGCGTTAAAGCATTCTCTATGACGGAAAAAGGATTTATGGTATCCTGATTGTAACATTTTGGTTAAGGTGCGAATGTGGAGCTCACATAAAAACCCCGGGTCCTTCGCACCTCGAAATTTGTCGAAAAGGATAAAAATCTGATTTCATCTATAAAAGTCAATAGTAGATTTAAGCTTTTTTGGTATTGTTTATTTTGAAATTGTATCGAATAGATACCTTTTTTGGATCAATTGGGTACATTTTCGCT # Right flank : AATTTTACGAGGGAAAAAATCCAAAAAACCTTAATTTTTTATACTTGTTCTATATAGTAGTACCAACGATTGATAGCTATTAGCTAGGTAGGATTCCTCTCTGGGGTTTAGCGGGCTGTGCCATTCGAACCGCTCTTGGGAAAACATCCATAAATCTAATTGTGGTATTATAGATGGGATTCATTGCTGCTAACAATGGAATAAGTACTAAAAATGTATGTGACAAGGTTATATGGGATACTGGTTTGTATTAAAGAAATGAACAGAACGTATACAGCAGGTAATGCATTAGCATGGGTTGGATTTTATTGGTATTTAATTGACGAAAGGTTATTCTCGAAGAAAAATTAAAGGAGTGAAAAAATGGACTATATCGCCCACATACGGGAAAGTGACCATGAGATTCAGACAGTTGCAGATCACCTGATGGAAACTCAACAACTAGCAGAAACTTATGGTGACAAAATAGGAATACAACATATTACTGGACTCGCTGGTAT # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTATATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.25%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-3.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //