Array 1 3387395-3387587 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGKQQ010000001.1 Gemmata sp. G18 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================================= =========================================== ================== 3387395 41 100.0 27 ......................................... TGTGGACCAATACCTCAATGCGTTTCC 3387463 41 100.0 43 ......................................... TGTGAACCACGTGCGAAGACGCCTAATACCCCAATGCCTTTCC 3387547 41 100.0 0 ......................................... | ========== ====== ====== ====== ========================================= =========================================== ================== 3 41 100.0 36 GCCCCGGAGGGGCCGGCGTTCGTAGCACAGGGCGGGAGCCC # Left flank : AATCAAGCGTTTCGCCATCGCGAACGACTCCTCGTCGCTCACCCGTTCGGCCCCGTCTATAACGCGAAGATCGAGCACCGCGGGCGGCTCACTGCCGCCGATCCCTTCAACTTTGTAATTCGCGTCATGGTCCGGCTGATTGGGATCGACGAGGTGCGCCAAACGGGAACCGATAGGGTCGGCTAAGATGACTTTGCGCCCGAGGCGTGAGTTTTGAGATACCGCCCGACACCCGTGATCGTTCCCCGGTACCGACCCCGCAGACGAGCGCACCCAGCTGCGCACCCAACTGCGCAACGATCTCTGGTCCGGTGGTCTGTTCGTGTACGCGCGTTCGCCGAACTGCCAAACTGGTCAGTTAGGAACCACCGTCCCCGGTCCACAGGGCTTCCGCCCTGTGCTACGAACGCCGGCCCCTCCGGGGCGGAAACGCATTGGCTTGCACTGCCGCGTCGAGAACGAGATGAAAGCGACCGGGCAGCAGATGGTTCTCTGTCTTG # Right flank : CCAGCGCCCCAACACAAAACCCCCGTGGCACCGACCACTCTGGTCGGCGCCACGGGGGTGGCTGGATCGGCGCGGTGCCTACTTCGCTTCCGGTGGGGGAGCTTCTTGGGCCGGCTGGTCTCCTTCGTCCGCGATGGGCTTACCGTTCTCGTGCGGTTCCTCCACGATGGCCTCCGCCATTGGAGGCTCTGCCACCTGTGCTGTCGGTGGGTTCGCGGCCGGCGCGTGGACCGCATGGGCGCCGTGCCCGCCGTGCGATTCGCCCCCGGCGACGGGCAGTTCTTCGCCCGGGGGCGGTTTCGGCGGGCCGTTCTTCAACTCGATCAGCCCCTGAATCGCCATGTAGAAGACCGGCACGAAGAACACCGCCAGCACGGTCGAGGTCAACATCCCGCCGAACACCGCGGTGCCCAGCGACTGCCGGCTCGCGGCCCCGGCCCCGGTCGCGAACACGAGCGGCACCACGCCCAAAATGAACGCGAAGCTCGTCATGATGATCG # Questionable array : NO Score: 2.56 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:-0.09, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCCCCGGAGGGGCCGGCGTTCGTAGCACAGGGCGGGAGCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-5.80,-4.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [41.7-28.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.01,0 Confidence: HIGH] # Array family : NA // Array 2 4014622-4017318 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGKQQ010000001.1 Gemmata sp. G18 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ======================================== ================== 4014622 37 100.0 39 ..................................... CTCTTGGGCCGCTGCCAACTCCTCGCGCCCGCGTTCCCC 4014698 37 100.0 34 ..................................... ATGTGGTCCCGGCTCAAGGCGGCCGGGCACAAGT 4014769 37 100.0 35 ..................................... ACTTCGCTAACAAGCAGGCCGGGTAATGTCGGCCG 4014841 37 100.0 34 ..................................... GGTACTCGTCTTCGAGCGATTCCGGCCCGTCAAA 4014912 37 100.0 32 ..................................... ACACTACCGGAGTGCCAGTGATGAAGTGCGAA 4014981 37 100.0 35 ..................................... ACCAACACAGCCCAAAAAACCTTGCGGATGGTGCC 4015053 37 100.0 32 ..................................... TCGTCTTCCAGGCGGGAGCGGGCCGACTCTTT 4015122 37 100.0 34 ..................................... AATCACACAGGGCGGGGCGGGTGGCAGGGAAAGT 4015193 37 100.0 36 ..................................... CTTTACAAGTCGTCCGCCAAGGTCCGCCGAACACGA 4015266 37 100.0 35 ..................................... AACACAAGCACAAGCGGCAACAACTGGTCCTTCTA 4015338 37 100.0 33 ..................................... TGTGCAGCTTGTACCGTTCTCTAGCCGCCTCTT 4015408 37 100.0 36 ..................................... ATGTAGGGGAAATAGCTCTGAATCAGAACGTTCGTC 4015481 37 100.0 36 ..................................... ATGCCCCGGCTGCGTTGCCAACCCGCCAGTGAGCCG 4015554 37 100.0 36 ..................................... TACATCGGGCGCGCGGGGGTTAACGAGAACCAGGAC 4015627 37 100.0 35 ..................................... TCGAACGGCTCGCCACAACGGGAAGCCGATGCGTA 4015699 37 100.0 37 ..................................... CAGAACTCTTCGGCTTCCAACCGCCGGTACGCGTCCT 4015773 37 100.0 34 ..................................... TTCGTGAGCAGTGCCGACTTGACGGCCGGCTCGC 4015844 37 100.0 34 ..................................... CAATTGGGCGGGCCACAAGAACCGGGGCGAAAAT 4015915 37 100.0 34 ..................................... TTGTACGTGCGGCCGGCCCAGCCCGCGAGCTGGC 4015986 37 100.0 35 ..................................... ACGACGATCACGCTGCCCGAGTTCCGGGTGGAGAT 4016058 37 100.0 33 ..................................... AAATGAAAAAAGGGGCACCGGTGGGCACCCCAT 4016128 37 100.0 35 ..................................... TTAGAGACGGCACACGCGCCCGCGATCGCCCGATC 4016200 37 100.0 35 ..................................... CTGAGTGCCGCGAGCGCGTGGTGCAGCGCAGTCAG 4016272 37 100.0 34 ..................................... TTCAGATGGCTCGCTTGACTTCGCAAAGTATCGC 4016343 37 100.0 35 ..................................... AAGAAACCTGCTAAAAAGCCAGCACCAACACCCAA 4016415 37 100.0 35 ..................................... CTGAAATACGATGCGGATCACGAGCAGTTGGACGG 4016487 37 100.0 36 ..................................... ATGTGAACTGGATGCACTCGGTGATTCAGTCGGGGA 4016560 37 100.0 35 ..................................... CGATTGCGCGGCCCGCGTGTCGAAAAAGAACTGCC 4016632 37 100.0 35 ..................................... AGGACGGGACGGACGACTTTGAAGACGACGAGCTC 4016704 37 100.0 34 ..................................... TTTTTCGGGAAGAGGAAGTAGAGAACGGCCAGAA 4016775 37 100.0 34 ..................................... AAGTCGTGCAGGCAGTCCACGTTCCCGGTATCGA 4016846 37 100.0 36 ..................................... TATGACGTCGAGGCGGTAATCGACGGCACGAGTCAG 4016919 37 100.0 35 ..................................... AACAGTGGGGAGCTATTCAGAAAGGCAACTCCGAT 4016991 37 100.0 40 ..................................... CCGACTGTTCCCGTCGCGTCCGCCTGGAGCACCGGAGCAA 4017068 37 100.0 35 ..................................... CTGATGTGCGTGATGGCGACCGCGGCCCTGTTGAC 4017140 37 100.0 35 ..................................... TGCACAACGTGTTCGTCGGCACGAGCGTGGCGTGC 4017212 37 97.3 33 ..................................G.. ACAGCGTAAGTTCGCGATAATCTGGCGCCGCGT 4017282 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ======================================== ================== 38 37 99.9 35 GTTCCCCGGTGTGATGAACACCGGGGCGGATTGAAAC # Left flank : TTCCGGGGAGCGGCATGAAAGTTCTCGTCGTTTACGACGTAAGCACGTCCGACTCGAACGGCCCTCGGCGCCTGCGGCGCGTAGCCCAGGCGTGTCAGGATTTCGGCCAGCGGGTTCAGAAGTCGGTGTTCGAGTGCTCGGTAGGCGAAACCGAGTGGGTGCGCCTTCGCACCCGTCTCCTCGCCGAAATGGACGAGCGTCGGGACTCGGTCCGGTTCTACTTTCTGGAAGCCGACGTGCGCGTGGAGCACCACGGCGCGGGCGAGCCGTGGAACCTGGACGGGCCGCTCGTCGTATGATGATGACGTGGAAAGTTGGGATCGCGGACCCAAAGTGGTGTCGGATCAGTAAGGGTGTTCGCGATCGGTCGGAAGTACTGACCTGCTCAGGGTTACAGTGATGTTGAGGGCGAGCATGGAATCGGCGCAAGCCGTGTGGCAGCGGGGTTCGCGGAAAGCACCCCGGAAATGCTTGCCCACAAGCCACGCGCAAGGACTGCG # Right flank : CTCACAGCTCGCTATCGCCGTCGCGTCCTGGCAAATGTTCCCCGGTGTGTGAAGAAGCCAGTGACGCCGAAAGGCGTTGAGCACTCCTCGTCTTATCTCATGCTATTCGCGTTAGGTAACATTGGAACCGGACGGCCTCCACGCGCTCGATTACCTGAACAGCGTGACCGGTGCGATCGACGCGCCGAGCCCTTCGGCCGGGAGCCCGAGCCAGTTCGCGAGCGTCGCCGCGTACACGCGGCGGAAGTCGGTCGTCATTTTCGGTTCCCCAGCCACCAGATCCGTCAGGCTCGGCGCGGTCCCGTGGATGCCTCCCTTTACCCCGGGGCCGGCCAGGAACGCGCACCCCGCGGTTCCGTGGTCCGTACCGGCCGACCCGTTCTCCTTAATCGTCCGCCCGAACTCGCTGAACGCCAGCAGCGCGACCCGGTCGGCGCACCTCGCCGCGGTCAGGTCCGCGAAGAACGCGGACAGCGCCTCTGCGAACTCAGAGAGCAAAA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCCCGGTGTGATGAACACCGGGGCGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-12.70,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [33.3-40.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : NA // Array 3 4086003-4094133 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGKQQ010000001.1 Gemmata sp. G18 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ========================================= ================== 4086003 36 100.0 38 .................................... CGGTATCCAAGTTGCCGATTGGTTGGGTCGGTATGGAG 4086077 36 100.0 39 .................................... CGCGACAGTTACGCAAATTCCACAAGGGGAAACCGAAAC 4086152 36 100.0 37 .................................... TTCGGAAGTTTATGCCGCTCGCGGACTAGATTATCGC 4086225 36 100.0 37 .................................... GTGGGGTTAATCTCGATACATTCGCCGGTAGCCACAC 4086298 36 100.0 37 .................................... AATAGTGATCGGTGGAATTTCAACGGCAGATGTTAGA 4086371 36 100.0 39 .................................... CTTTGTTGTATACCGCCTCAATACCCGGAACGGAACTAT 4086446 36 100.0 37 .................................... ACATAGTATTTCATCGTGAACGTGCGCAACAACCGGC 4086519 36 100.0 36 .................................... GTCATGCGTGCCATTTCTTTTCTCCCGTCTTTAGGT 4086591 36 100.0 39 .................................... ATGTCGTTGCGCCAGATGGCCAAATCAAACACGGGTCGA 4086666 36 100.0 36 .................................... AGAAATTATTTTTCCGCAACTCCTTAGTGTCGTATT 4086738 36 100.0 34 .................................... TACTTGTCCTCGTACTCGGTAACGGTGTGCTCGT 4086808 36 100.0 36 .................................... CTTCTTGACCGTCTTCGTCTTCACCGCCTCGTCGGG 4086880 36 100.0 36 .................................... AGGGTACAAAACCTCTCCACTCTCGGAGGGGGCTTT 4086952 36 100.0 38 .................................... TTGCTGTCGGCGTCCGGGCGCTTGAGCGTGTGCCCGGC 4087026 36 100.0 35 .................................... TCACCGGTCCGAGTGATATTCAGCGCACGATTGAG 4087097 36 100.0 36 .................................... GGTAGTTCCCGCCGAACCCGTCCGCGGTCGGGAGCC 4087169 36 100.0 38 .................................... GCCGGCGTCCAGGGTCGCGCTCTCTTTCGGCCGTTCCA 4087243 36 100.0 37 .................................... CGACCAGTCGGCGTGCGCCTCGCCCCGGAGACCGCGA 4087316 36 100.0 36 .................................... GTCGTGTACGCAGGATTCACCGGCTCAATCGATCGT 4087388 36 100.0 35 .................................... GGTCTTTACACCCTTCTGGGTGGTGACTGCGATAA 4087459 36 100.0 38 .................................... GGGTGGACGTGCTACCACACGCTCGACAGCCGCGGTAG 4087533 36 100.0 39 .................................... CTCTGTTACGACGCCACGTTGTGGACCGGAATTGCGGGT 4087608 36 100.0 39 .................................... TACGGGGTGCCGTGGCTCATCATGCCGCAAAAGTTCGCG 4087683 36 100.0 39 .................................... CGCTGTTGTAGAGCGGTTCCGACCATCGTACATCCCGAC 4087758 36 100.0 35 .................................... ACTTCCGCGATCGTGGCCTCTACTTCCGCGGCCTC 4087829 36 100.0 38 .................................... TACGGGGAGAGGAGAAAAAAGAGTGACGCGCCGGCGCC 4087903 36 100.0 36 .................................... CAGCACCGGGCCGACCTGCAAGACCTGACGAAAGAC 4087975 36 100.0 39 .................................... CCAATTGTCGCCCGGAGCGCCGAACCGGGGAATCAAATC 4088050 36 100.0 36 .................................... TTTGTCAAACGTCTTGTCGGCCGCTCTGATCCTGAA 4088122 36 100.0 38 .................................... ACTGTGTACATTGCTTTCTCTCCGGCGACAACTCCGAC 4088196 36 100.0 38 .................................... CACAGCTTCGTTGTCTCGACCGTCTCCGGGCGGATCGT 4088270 36 100.0 37 .................................... TACGATCAGGTCGAGGCCGTCACGCCCGACTGCTGTT 4088343 36 100.0 36 .................................... CACTCGTGAGCGTGTAGTTCCCGCCCGCCTCTTGTA 4088415 36 100.0 38 .................................... TTTAGGCCGCTCGCTTCGTCTTTCACAAGAAGGTCTTG 4088489 36 100.0 34 .................................... ACTAGCACGGGCTTCGATCTCCTCGACTATGGGC 4088559 36 100.0 39 .................................... TGCTGGTGCTGTGCCGCATACCCCAGCGGGCCCATCGTC 4088634 36 100.0 37 .................................... GTGGTCAAAACGATCACGTGCCGCCGGTTCAACGGGA 4088707 36 100.0 35 .................................... GTTATTTCCCCAGAGGCGGGGGCGCGCCCACTCAC 4088778 36 100.0 37 .................................... AGCCCCTCGATCGGCGACAGGTCGAGTTCCGTGCGGG 4088851 36 100.0 38 .................................... ACTCGGCCGCTTCCTTCACGCGGATGCGGGTTGACTTC 4088925 36 100.0 35 .................................... ACGGCCACGAGCACGCCGCGGAACGGCACCAAGTC 4088996 36 100.0 41 .................................... TCGTACCTCGCGCAAATCCGGTCCAGTTCGGCCCGAATCGT 4089073 36 100.0 38 .................................... GACTTTGTTGTAACCCACGTAGAGAACCGCGGCAGCCC 4089147 36 100.0 35 .................................... CCCGCGTGCCTGGCGGTCGGCCAAGAATTGCGGGC 4089218 36 100.0 36 .................................... TCTACCGACGTGTGGTGCAAGGAAGAGTGGCGCGCG 4089290 36 100.0 38 .................................... GAGGAACCACCGAACCCCCTCGAAACAAAGAGCGAAGA 4089364 36 100.0 36 .................................... GAAGTCGCCGAACCCGAACAGCCGACCCGCCAGTAG 4089436 36 100.0 36 .................................... GGGAGCACAGTGAGTTCGGAGGATGCCGATTGCGAG 4089508 36 100.0 36 .................................... ACGTGCGGATCGGCGCGACGGTAGTGTCGAACGGTG 4089580 36 100.0 36 .................................... ATGGTACGCGACTCGTTCGACCCGACCGTGATCCGG 4089652 36 100.0 37 .................................... CGTTTGTGGAGAGGCGTCCAGTACAGTATGGGCGTCC 4089725 36 100.0 35 .................................... GCGGGCGCGAGCAGGCTCGCACCGACTGCCAGGAA 4089796 36 100.0 39 .................................... GACCGCGCCAAAGCGGACTACACACAACGGTTCGCGGGC 4089871 36 100.0 37 .................................... TACTGGATAGGCTCGCTGAACTTGGGCGCGTCGGTAC 4089944 36 100.0 36 .................................... CATGACGTGCGATTGGCGACACGCAGCCCGTGCGGA 4090016 36 100.0 36 .................................... TCCGCTAGGTCGCCGTCGAGGTCCGCAGCCTCTTCC 4090088 36 100.0 37 .................................... GCGATGTGCGCAGAGCTACTCTACTGCCGAACCGGTG 4090161 36 100.0 38 .................................... CCTGATGGACCACGGACTGTACTCTCAAGCGGAGTGCG 4090235 36 100.0 37 .................................... GGCCCACACGTCCCTCACGCGGATACTCGGCGAACTG 4090308 36 100.0 37 .................................... TGGAACGCGGCAATGTCGCCCCCGCCGTGCCCGATGC 4090381 36 100.0 36 .................................... CCCTTAATCGTTGTTCCTGGGGGGAGGATGGCTGAG 4090453 36 97.2 36 ......................A............. CCCCCTACGCACGATCTAATCCTGGATCATCTTCAC 4090525 36 100.0 38 .................................... CGATCTCTTTGCGGAAGATGCGTGCCGGGGTTTCGAGG 4090599 36 100.0 36 .................................... TACATATCATAAGCCTTGAGGGCAGCCAGTGCGATA 4090671 36 100.0 35 .................................... CGGGCTTCATCGCCCTGTGGTTCTTCCTGACGCGC 4090742 36 100.0 36 .................................... GAGGGGCCACGAGTTCATTCGGCCGTTGAGGGTGCG 4090814 36 100.0 36 .................................... TACGGTACTCGCGTCACCGTGAACAAGGACGACAAA 4090886 36 100.0 35 .................................... GCGGTCGGTTCGCCGCTGAATACCGGGGTGACGGA 4090957 36 100.0 36 .................................... TGTCCGCCCAATCGTGGCGACTCGTCTGGCGGCACG 4091029 36 100.0 38 .................................... CGGTCCGGCCCCCACTTCGTTACCCACTTGCACCGCGC 4091103 36 100.0 36 .................................... GAAGTGCGGGGAACCAACGAGGACCGGAACCTTGTT 4091175 36 100.0 35 .................................... CCCGTTCCGAAAGAAGCACCCGGCACACCTGCGCC 4091246 36 100.0 40 .................................... CCCGACAGCCCGTAGGGCGGCAGGTACGCGGCCACACCGG 4091322 36 100.0 36 .................................... CATCCGAGTTGCCCCGCCGCGGCGCCCGACCGTAGC 4091394 36 100.0 39 .................................... GAGTAGTTCGAGTACCCCCGGCGTCCGCCCGTGAGCCGT 4091469 36 100.0 39 .................................... CAGGTCCATCATGGACTTGACGAATTGCTTGATCCGGGA 4091544 36 100.0 36 .................................... CGCGCGTACACCGCCGCCGGCGACGTGCCCAGTGAA 4091616 36 100.0 35 .................................... ACCTTTGCCGGAGCCTTCACATTTGCAGGCCGACC 4091687 36 100.0 38 .................................... ATGGTCCGCGACAGCTTCGACCAAGCGGTGATCGCGGA 4091761 36 100.0 38 .................................... GTCAGTGGCGTTTATGCTCGGGTCAACCGGCAGGTCGC 4091835 36 100.0 35 .................................... GACAACTTCACGCCGTGCTACACGCTTGACGTGAA 4091906 36 100.0 36 .................................... GTGCAACACTGGTCGTGGCGGATGGACACAGGGGGC 4091978 36 100.0 38 .................................... GTCACGCCCGACAGCCCCTTCTCGAAGCGACCGTCCGC 4092052 36 100.0 36 .................................... AGGCCAAGCAACGAGCCTCTTAGCCCCGGAATTCAA 4092124 36 100.0 38 .................................... CTACCACCATTGCGCCCACCCGCCGTGACACCAGTGGG 4092198 36 97.2 36 ....................G............... GATGCGGTACACGTGCTCTTTGAGCCGACGCGCCCC 4092270 36 97.2 36 ....................G............... GAGGAACGGTACCGCATCACAAATACCCCCTCGTGG 4092342 36 97.2 36 ....................G............... CCCGTGACGCAGGCGATGACCTACGCCGCGTCCGAG 4092414 36 97.2 37 ....................G............... AACCCCTTCCCGAGACAGCCTGAGCACTTTGCCCCGC 4092487 36 97.2 35 ....................G............... TCCCACTCCGCGCGCCACCGCGGATCACCGTCGTC 4092558 36 97.2 37 ....................G............... CTGCGGTCGTCACGTTTTCTTCGGCGCCTGCAGGCGC 4092631 36 97.2 38 ....................G............... ATCGACATGAAGCCCGTGCGGTTCGGCGACTTGCCCTC 4092705 36 97.2 38 ....................G............... AACAGCACCATTAGCCCCATGACCGCAAGCGGCGCGAA 4092779 36 97.2 38 ....................G............... GCTACGTCTCGAACGTGTGCCCGAAGTTCGGGTACGTG 4092853 36 97.2 36 ....................G............... ACGGTACGATGGGACTTTGGTCAAGTCCATACCGAG 4092925 36 97.2 36 ....................G............... CCACTGGTACTTGTCGGGTAGCTTCCAATACTCCCC 4092997 36 97.2 39 ....................G............... TCGAAGCCCGGTCGGGGTTTCGTAGACGACGCTCAGTTG 4093072 36 97.2 35 ....................G............... AACGGCGGACACAACCACGGGGCCAAATGAACCGG 4093143 36 97.2 38 ....................G............... CGATCCAATCGAGCCAGTTATAAACCTCGATGTCGTCC 4093217 36 97.2 38 ....................G............... AGGAAGCACCGCGCCCACGTGCTCTTGCACAACACCAG 4093291 36 97.2 38 ....................G............... CTCGCGCGGTACGAGGGCGACCGGGACGTGCCCCAGGT 4093365 36 97.2 36 ....................G............... CACCGCGAGAACGTCCGCAACTGGCTGCCGGTGCAG 4093437 36 97.2 34 ....................G............... GGGCCCCGGGTTGTCGCCCAGGAACAGAATCCGG 4093507 36 97.2 40 ....................G............... CACGCTCACCGGTGAGACGTACCAAAACTAAGGGGCCGCC 4093583 36 97.2 35 ....................G............... GACAACCGGTTGACCGTCGCGTCGCTCAGTTCCAA 4093654 36 97.2 36 ....................G............... TTCCACACCTTGTTGTTGCCCACCAGGCTCACGGAC 4093726 36 97.2 36 ....................G............... ATTTGCTGTCGATGTGTAAAGGTTATCTCATCGGCA 4093798 36 97.2 39 ....................G............... TCGCGAAGGTGACTACCGGAGCACGGGTCGCGCCGGCAG 4093873 36 97.2 38 ....................G............... CGAGCCGCCGCCCCGCCGCCGCCCCCGCCCCCGCTCCG 4093947 36 97.2 38 ....................G............... AGCCCCGCCACAACAACCCGCCTAGCGGTCGAACCGTG 4094021 36 97.2 41 ....................G............... TGGCCACCGCGTGACAGCCAATCGGCCACGGGTTCCGAGTA 4094098 36 97.2 0 ....................G............... | ========== ====== ====== ====== ==================================== ========================================= ================== 112 36 99.3 37 ATCTCCGCGGCTCATAAGCCTCGGCCGAATTGAAGC # Left flank : TCCCAGACGGTGGAGATCGCGTCCGAACGCGCGGCTTCCGGGGAAATCGGGTCGCAAACACGTACTGGATCTGGCCGTTATGGACTTCCCGCTTGACACCGGACGGCGTGGCCCCGATCCTCAGTTTGTCGAAGCTCCAATCCCAATCTCTCGACGCCAACGCACTCCGATGTTTTGGCGTAACGACCGTTTACCAAAGTCAGAGGATCTTGGTGGGCAAAACTCCGAACCTGACCCCGACCCGCGCACTCGTGTGACGCGCCCCGAGGGCGCTGGTGATGAACTCGGCCCCGAGCCGGTTTCGCGCCGTAGGTCTTTGACAACACAGGACATTCCATTGGAGTTGCGGCTCGTAGCCGCTCGCGAGCCGCAACCTCCAAACCCGACAACGACTTGAGGCTCCCATGCCCGCAACGCTCCGGCCTCCCGACCCCGTAAGACGCAACCGCTCGCGGAAGGCGCCCCATTCCGTTGTCACTGCACGTGTTCCAACAATGGCG # Right flank : CTTTATTCATTCTTTCTGTACTTTCCGCGAAGTTATAGGCGGTTGGCGTAAGTTGTGGGGTCGGGGTAGACGAGTGCCGGCCCGTCCGGGAGGATGGCGTTACCACACGACCTCCCGACCCGAACGGACGCGGCCATGCCATCTTCGCATACTCCGGCCCCTCGGTGCCACTGGTTTTCAACCCTGGCAAGGCTCTGGACCCGCGGTCCGGGCGGCGCTCGCGGTCCTGTTCCTCGGGATCATCCTGACCCGCGGGCGCCGCACCCTCGCGGGTTGGATCCGGGCCGCCGGGCTGTCGCCCCAGTACCGCCGGTGCTACGCCGCCACGGCCGCGGCCGTGGGGCGCCGCACCGAGCGTATCGCCATGCGGTTGTTGGTCGAGGTTCTCAAGCCCATGGTGGCCGGTGCGCTCGGGTGGTGCTGGCCCTCGACGACACCCCGACGGAGCGGTACGGGCCCAAGGTTCGAGGGGCCGGGGCGCACCACAACCCGACACCCGG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTCCGCGGCTCATAAGCCTCGGCCGAATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,7] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.20,-6.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [36.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.15,0.27 Confidence: MEDIUM] # Array family : NA // Array 4 4095647-4098090 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAGKQQ010000001.1 Gemmata sp. G18 1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================================================================================================================== ================== 4095647 36 100.0 38 .................................... GTCGTCCTCGTCGGCCCACTCAGGCACGGACGGCCCGC 4095721 36 100.0 35 .................................... CTCGTCGGCCGGGTAGCTCTCGGCCCATCCGAGGA 4095792 36 100.0 37 .................................... ATCTCGTCGCCCTCGGTTCTCTGCCAGGGAAGGCGGG 4095865 36 100.0 36 .................................... CACCCGCTCGCCGCCCCGCCGAGGGGATTGGCAATG 4095937 36 100.0 38 .................................... ACCAGCGACTTCGGGTCCGGGACCGAAACCCAACCGTC 4096011 36 100.0 35 .................................... GTGGCTTCCACGTATTTATTAGCAATGGCTTCCGC 4096082 36 100.0 35 .................................... TATCCTGAGTCCACCGGATACCACGGCTTATAGTA 4096153 36 100.0 35 .................................... TCGACATTCCATGTGACGTATTAGCTTTCTTTCGT 4096224 36 100.0 35 .................................... GGGATCATCGATGATAACAAAATCTGGGCGGAGAA 4096295 36 100.0 37 .................................... ATCTTGCTCGCATGGTGCTTGCAAGATGGCAATCGGA 4096368 36 100.0 35 .................................... ACCGCGTGCCAGCATGTTACGCAGACGAATGGGCG 4096439 36 100.0 36 .................................... ATCAAAGGACCAGTAACAAAGCCTACCTCCGCACTC 4096511 36 100.0 43 .................................... CCGGAATCTCGCCGGTGTAGATCACTGCCGCAGCACGATGCGC 4096590 36 100.0 38 .................................... GGGCACCTGCCCCATCTGCTGCAAGCGACCGACCGCAG 4096664 36 100.0 36 .................................... CAAGCACTGCAACACCGAGTTCAAGGCGGTTGACTC 4096736 36 100.0 35 .................................... TTTCACGGCTGCGTCTATCGCGTCGAAGTCGTCTT 4096807 36 100.0 36 .................................... TTCACCCAGCCCTCGCCCTTACCCACTCGCCGGCCG 4096879 36 100.0 36 .................................... ACAATCTCGCCGAGCGATAGACTCGGACCTTCAGAT 4096951 36 100.0 38 .................................... CTGGTGAGGCGCGTCGATGGCCGACTGGTGCTGTTGGC 4097025 36 100.0 34 .................................... CTGCCGCGCCCCGGGGACGTGCAGGCGGAACCGG 4097095 36 100.0 37 .................................... TTCGCTGTTCGCGACCTCGCCCCGGTCCCGGTGGATC 4097168 36 100.0 40 .................................... CTTGCCTTCCGCGGGAATCGTTCGCCCCTCGCGGAACAGG 4097244 36 100.0 35 .................................... TGCGCGTACGCAGTGGTGTCAGCGGGTCTGGTCAA 4097315 36 100.0 36 .................................... TCTCGTGCGGTCTGTAACGACTACGCTGCCGGTGCG 4097387 36 100.0 38 .................................... ATCTCGTTTACGTAGCTGGCAGGCATGCGTCGCACGAC 4097461 36 100.0 34 .................................... CGCAAATCGTGACCTTCTTTTCTCAGATCGTCAA 4097531 36 100.0 35 .................................... TGTTCTCGGTAACGCGCCTATCATCTGGAATCGAC 4097602 36 100.0 36 .................................... ACTTTCTCTGAGTATCTGGCACAAGACCCCACACGG 4097674 36 100.0 127 .................................... CCGTGACCCGCCACTTCTTTCTAAGTGACTGTCCCATATGTGCGAAAAAGCCTGAGAAATCGTGGGTGACAACTCGAAAATACGGCGATTTCGAGGCATATGGGACAGTCACTAAGACACTTTTCGA 4097837 36 100.0 35 .................................... GCTCGCCGCGGCCGGGCGGTACTTGCGCGCGACAT 4097908 36 97.2 38 ....................C............... TATCTGGGATATGCACTGGGCCGCGGTCAACCCGCCGC 4097982 36 100.0 37 .................................... CTGACCGTGGAACAGTACAAGGCCCAGCTTTCACGGG 4098055 36 94.4 0 ...............................T...T | ========== ====== ====== ====== ==================================== =============================================================================================================================== ================== 33 36 99.7 39 ATCTCCGCGGCTCATAAGCCGCGGCCGAATTGAAGC # Left flank : GCACGATCCGGGTCGTCCTGGTGGACGAACCCAAGGGGTGGGTCGCGTTCTTCTGCACGGACCCCACGGCCTCCGTGGCCGACATCCTGGGCCTGATCGCGGACCGGTTCTCGTTGGAAACCTGTTTTCGAGATCTCAAACAGGTCGCGGGCGCCGGTCACCAGCAGGTACGCGGGGTCGCGTCGAACGTGGGATGCTTCCACCTGTGTGCGTGGTCCCTCACGCTCACCGAGGTGTGGGCCTGGAACCAGAAGGCGGATGAACTGGTGGCCCATCGGGCGGCCTCCCCGTGGGACGATCCGAACCGCCCGAGCCACGCGGACAAGCGCCGGGCCTGGCAACGGGAGCTGCTGGCCGAGGAAATTCAGGCCGTTGTGGGCGAGCACCACGACCCCGCGAGAATCCGCGCCCCGCGCACCGGTGCCTGGATCTGGCTGCTTAAACGCTATAAGTTCGCGGAAAGTACAGATTCTTTGTCAATCGCTACCGTGCGATTGCGG # Right flank : TTCGAGGCTGCGCTTGCGGCGGGGATTGAATTTCGGGTATCTGCGCGGCGTCCTCCTCGACGGGCACCGCAAGAGCGTCGAACCGATGGCGGCCCGGCTCAAGGCCATCGAGCAGGGCGAGGATTACGAGCAGGCGCTGCAGCATTTCCTCAACCAGAGCCCGTGGGACAAGCAAGAACTACTCGACGACCTGCACGTCTGGATCGGGCGCCACTTCGGCGCCGACGGGTTCCTCATCATTGACGACACCGGGTTGCCCAAGCAGGGCGCGCGTTCCGTGAGCGTGGCCCGGCAGTACACCGGAACCCTGGGCAAGGTCGCGAGTTATCAGGTCGCGGTAGCCCTGCAGTTCGCGGCTGCGGCCATGTCGTCGCCCTCGACGCCCGGTTGTACCTGCCGGAGGCTTGGACCGGGGAACGGGATCGGATGACGCAAGCGGGCATCCCGGGCACGGTCGGGCATCAGCCGAAGTGGCAAATGGCCCTGGACATGGTGGGCCG # Questionable array : NO Score: 3.00 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.24, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATCTCCGCGGCTCATAAGCCGCGGCCGAATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [53.3-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA //